Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347416

Identifier: 29347416

GI number: 29347416

Start: 2522698

End: 2523312

Strand: Reverse

Name: 29347416

Synonym: BT_2006

Alternate gene names: NA

Gene position: 2523312-2522698 (Counterclockwise)

Preceding gene: 29347417

Following gene: 29347415

Centisome position: 40.31

GC content: 48.29

Gene sequence:

>615_bases
ATGCAATACAATACCCAGCAGAAAAGAATGCCGCTTCCCGAGTACGGCCGCAGCATACAGAACATGGTAGATTATGCGTT
GACCATTCAGGACCGTGCCGAGCGTCAGCGTTGTGCTAACACAATTATCAACATTATGGGAAATATGTTCCCCCATTTGC
GTGATGTGCCCGATTTCAAGCATAAACTTTGGGATCACCTGGCCATCATGTCCGGTTTTGAGCTGGATATTGACTATCCC
TACGAAATCATCCGCGAAGACAACCTGGTGACCAAGCCGGAACCGATCCCATATTCTACTACCCGCATGCGCTACCGCCA
CTACGGACACACGCTGGAAGTGCTGATCAAGAAAGCCTGCGAACTTCCCGAAGGAAACGACAAAAGAAATCTGACAGCCA
TGATCTGCAACCACATGAAGAAAGACTACATGGCATGGAACAAAGATACCGTAGACGACCGCAAAATTGCGGAAGACCTC
TACGAACTTTCCGGCGGCAAACTACAACTGACAGACGACATCATCCGACTGATGGCAGAACGCCTGAACCAGAACTACCG
CCCAAAGGTGAACTACAATAATAATCGGAATAATAATCCGCGGAGAAGATATTGA

Upstream 100 bases:

>100_bases
GCCTCAGTAAGTGAACCGCCTTTGGCGGGAAACAGTGATTAGTGAGTGACCGTCGTCCTCCGACTTTTAATTTTTAATTT
CAAAACTTTTAATTTAAAAG

Downstream 100 bases:

>100_bases
AGTATTAGGTATTAAGTATTAAGTATTAGCGCGGCGATGTTGTTTGCTGTATGAGATTTTGCACTTGCGGTCTAATACCT
AATACTTAATACCTAATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFKHKLWDHLAIMSGFELDIDYP
YEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKACELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDL
YELSGGKLQLTDDIIRLMAERLNQNYRPKVNYNNNRNNNPRRRY

Sequences:

>Translated_204_residues
MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFKHKLWDHLAIMSGFELDIDYP
YEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKACELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDL
YELSGGKLQLTDDIIRLMAERLNQNYRPKVNYNNNRNNNPRRRY
>Mature_204_residues
MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFKHKLWDHLAIMSGFELDIDYP
YEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKACELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDL
YELSGGKLQLTDDIIRLMAERLNQNYRPKVNYNNNRNNNPRRRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24429; Mature: 24429

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFK
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HKLWDHLAIMSGFELDIDYPYEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKAC
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDLYELSGGKLQLTDDIIRLMAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
RLNQNYRPKVNYNNNRNNNPRRRY
HHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFK
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HKLWDHLAIMSGFELDIDYPYEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKAC
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDLYELSGGKLQLTDDIIRLMAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
RLNQNYRPKVNYNNNRNNNPRRRY
HHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA