| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347416
Identifier: 29347416
GI number: 29347416
Start: 2522698
End: 2523312
Strand: Reverse
Name: 29347416
Synonym: BT_2006
Alternate gene names: NA
Gene position: 2523312-2522698 (Counterclockwise)
Preceding gene: 29347417
Following gene: 29347415
Centisome position: 40.31
GC content: 48.29
Gene sequence:
>615_bases ATGCAATACAATACCCAGCAGAAAAGAATGCCGCTTCCCGAGTACGGCCGCAGCATACAGAACATGGTAGATTATGCGTT GACCATTCAGGACCGTGCCGAGCGTCAGCGTTGTGCTAACACAATTATCAACATTATGGGAAATATGTTCCCCCATTTGC GTGATGTGCCCGATTTCAAGCATAAACTTTGGGATCACCTGGCCATCATGTCCGGTTTTGAGCTGGATATTGACTATCCC TACGAAATCATCCGCGAAGACAACCTGGTGACCAAGCCGGAACCGATCCCATATTCTACTACCCGCATGCGCTACCGCCA CTACGGACACACGCTGGAAGTGCTGATCAAGAAAGCCTGCGAACTTCCCGAAGGAAACGACAAAAGAAATCTGACAGCCA TGATCTGCAACCACATGAAGAAAGACTACATGGCATGGAACAAAGATACCGTAGACGACCGCAAAATTGCGGAAGACCTC TACGAACTTTCCGGCGGCAAACTACAACTGACAGACGACATCATCCGACTGATGGCAGAACGCCTGAACCAGAACTACCG CCCAAAGGTGAACTACAATAATAATCGGAATAATAATCCGCGGAGAAGATATTGA
Upstream 100 bases:
>100_bases GCCTCAGTAAGTGAACCGCCTTTGGCGGGAAACAGTGATTAGTGAGTGACCGTCGTCCTCCGACTTTTAATTTTTAATTT CAAAACTTTTAATTTAAAAG
Downstream 100 bases:
>100_bases AGTATTAGGTATTAAGTATTAAGTATTAGCGCGGCGATGTTGTTTGCTGTATGAGATTTTGCACTTGCGGTCTAATACCT AATACTTAATACCTAATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFKHKLWDHLAIMSGFELDIDYP YEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKACELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDL YELSGGKLQLTDDIIRLMAERLNQNYRPKVNYNNNRNNNPRRRY
Sequences:
>Translated_204_residues MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFKHKLWDHLAIMSGFELDIDYP YEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKACELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDL YELSGGKLQLTDDIIRLMAERLNQNYRPKVNYNNNRNNNPRRRY >Mature_204_residues MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFKHKLWDHLAIMSGFELDIDYP YEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKACELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDL YELSGGKLQLTDDIIRLMAERLNQNYRPKVNYNNNRNNNPRRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24429; Mature: 24429
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFK CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH HKLWDHLAIMSGFELDIDYPYEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKAC HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDLYELSGGKLQLTDDIIRLMAE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHH RLNQNYRPKVNYNNNRNNNPRRRY HHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQYNTQQKRMPLPEYGRSIQNMVDYALTIQDRAERQRCANTIINIMGNMFPHLRDVPDFK CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH HKLWDHLAIMSGFELDIDYPYEIIREDNLVTKPEPIPYSTTRMRYRHYGHTLEVLIKKAC HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELPEGNDKRNLTAMICNHMKKDYMAWNKDTVDDRKIAEDLYELSGGKLQLTDDIIRLMAE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHH RLNQNYRPKVNYNNNRNNNPRRRY HHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA