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The map label for this gene is 29347394

Identifier: 29347394

GI number: 29347394

Start: 2493601

End: 2493822

Strand: Reverse

Name: 29347394

Synonym: BT_1984

Alternate gene names: NA

Gene position: 2493822-2493601 (Counterclockwise)

Preceding gene: 29347395

Following gene: 29347388

Centisome position: 39.84

GC content: 42.34

Gene sequence:

>222_bases
ATGGAAAATAAAGAACTGCTCAATAAAATAAAGGTCTACAGGGCGATGAAGAATATCAGCCAGGAAGAACTGGCTGTAGC
CATTGGAGTAACCCGAAAGACAATCAATACGGTAGAGACCGGAAAGTTTATTCCCTCTACTGTCCTTGCGCTGAGGATAG
CACGTTATTTCGGGGTTCCGGTGGAAGAAATTTTTGTGTTGAATGATGAAGCATCGTATTGA

Upstream 100 bases:

>100_bases
TTTTTTAATCTCTCGGTACGTATGGGTGCTCTGGTTATAGTGGTGGTAGCTATGCTTTTCTCAGAAATAAGAAGATTGCT
TCTGTATAATCCCTATAAAG

Downstream 100 bases:

>100_bases
AATGATGAACTCTGCCTGACGGCTTTCTTTTACTTACAATATCAGCCAGATCGCTATGATATGCCCTATGCTTCCTCCCA
AACAGAACAGATGGAACGTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MENKELLNKIKVYRAMKNISQEELAVAIGVTRKTINTVETGKFIPSTVLALRIARYFGVPVEEIFVLNDEASY

Sequences:

>Translated_73_residues
MENKELLNKIKVYRAMKNISQEELAVAIGVTRKTINTVETGKFIPSTVLALRIARYFGVPVEEIFVLNDEASY
>Mature_73_residues
MENKELLNKIKVYRAMKNISQEELAVAIGVTRKTINTVETGKFIPSTVLALRIARYFGVPVEEIFVLNDEASY

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8275; Mature: 8275

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKELLNKIKVYRAMKNISQEELAVAIGVTRKTINTVETGKFIPSTVLALRIARYFGVP
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
VEEIFVLNDEASY
HHHEEEECCCCCC
>Mature Secondary Structure
MENKELLNKIKVYRAMKNISQEELAVAIGVTRKTINTVETGKFIPSTVLALRIARYFGVP
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
VEEIFVLNDEASY
HHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]