| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347352
Identifier: 29347352
GI number: 29347352
Start: 2444282
End: 2444722
Strand: Reverse
Name: 29347352
Synonym: BT_1942
Alternate gene names: NA
Gene position: 2444722-2444282 (Counterclockwise)
Preceding gene: 29347353
Following gene: 29347351
Centisome position: 39.05
GC content: 39.23
Gene sequence:
>441_bases ATGCGTGAATATGCTAAAAATCCTTTTGGAGCTCTCAATAAAGAAAATATATCAGCCGAGGGTATGGATAAATGGGCAGC CGTTACCAATAAATATATGGAAATGAAAACAAACATATCAACAAAGCAAATAGAATTGCAATCTTCCGGTTGTAAAACTC TGATCTATGATGTATCTCATTCTTCCGGCCAAGAAGAAATCGGCAATTACCGCATTCTAGATAAATCCACCGGTAAGACA GAATCTATAAATGTGGGGGATATTGACCTGGAAAAGCAGTCTCCGGAAACACTCAAAAAGTTGTTATCCGGACAACAAAC AGAAATGACCAATAAGTCCGGCACAAACAGTCTTGTCACTCTGAATAAAACCATAACGGGGTGGGGAATATCCGCAGTAA AACAAGTATTCAACTCAGCTGACAACTCTGCCGGCATTTAA
Upstream 100 bases:
>100_bases CGGTGAAGATAACCCACATCCTTTAGAATGGTACTCCTCGAATAATACAAAAGCAGCGATAAGTCCAGAACAATATTTAT CAGAAGAACGTAATAAAATA
Downstream 100 bases:
>100_bases ATTATTCTGGCAACAAAAACGAAGATATAAAATGAAAGATCAAAAAGAACTACTGAAGAAATGTCTGGTAAACGATATTC CAGCCATTGTTTTCCAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MREYAKNPFGALNKENISAEGMDKWAAVTNKYMEMKTNISTKQIELQSSGCKTLIYDVSHSSGQEEIGNYRILDKSTGKT ESINVGDIDLEKQSPETLKKLLSGQQTEMTNKSGTNSLVTLNKTITGWGISAVKQVFNSADNSAGI
Sequences:
>Translated_146_residues MREYAKNPFGALNKENISAEGMDKWAAVTNKYMEMKTNISTKQIELQSSGCKTLIYDVSHSSGQEEIGNYRILDKSTGKT ESINVGDIDLEKQSPETLKKLLSGQQTEMTNKSGTNSLVTLNKTITGWGISAVKQVFNSADNSAGI >Mature_146_residues MREYAKNPFGALNKENISAEGMDKWAAVTNKYMEMKTNISTKQIELQSSGCKTLIYDVSHSSGQEEIGNYRILDKSTGKT ESINVGDIDLEKQSPETLKKLLSGQQTEMTNKSGTNSLVTLNKTITGWGISAVKQVFNSADNSAGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15972; Mature: 15972
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREYAKNPFGALNKENISAEGMDKWAAVTNKYMEMKTNISTKQIELQSSGCKTLIYDVSH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCC SSGQEEIGNYRILDKSTGKTESINVGDIDLEKQSPETLKKLLSGQQTEMTNKSGTNSLVT CCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEE LNKTITGWGISAVKQVFNSADNSAGI ECCEECCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MREYAKNPFGALNKENISAEGMDKWAAVTNKYMEMKTNISTKQIELQSSGCKTLIYDVSH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCC SSGQEEIGNYRILDKSTGKTESINVGDIDLEKQSPETLKKLLSGQQTEMTNKSGTNSLVT CCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEE LNKTITGWGISAVKQVFNSADNSAGI ECCEECCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA