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The map label for this gene is cspC [C]

Identifier: 29347294

GI number: 29347294

Start: 2371809

End: 2372267

Strand: Reverse

Name: cspC [C]

Synonym: BT_1884

Alternate gene names: 29347294

Gene position: 2372267-2371809 (Counterclockwise)

Preceding gene: 29347295

Following gene: 29347293

Centisome position: 37.89

GC content: 37.91

Gene sequence:

>459_bases
ATGGCAAAATCCATTACGGTAGGTAAACGTGAAAATGAAAAAAAGAGACTCGCTAAACGAGAAGAAAAACAAAAGAAAAA
GGATAGCAAGAAGTTATCCAGTAAAAGCAGCTTCGATGATATGATTGCTTATGTGGACGAGAATGGAATGATAACTTCGA
CTCCTCCGGCTGAAAACATTAAAAAGGAAGAGATAAACCTGGATGAGATAATCATTGCAACTCCGAAGAAAGAAGACGAG
GAACCCGTTATATTGAGAGGGAGAGTTGAATTCTTTAATGAGGCAAGAGGCTTTGGTTTTATAAAGGACCTTGCCGGAGT
TGATAAGTACTTTTTCCATGTTAATAATGTCGTTGGTAATATCTCGGAAGGTAATATTGTAACATTCGATCTTGAACGTG
GTGTGAAAGGAATGAATGCGGTCAATATCTGTCTCGAAAAGAAACCGGTGGAGAATTAA

Upstream 100 bases:

>100_bases
GAAATTGACAGGCAAAAAACTAAATAGGGCTGATTTTACAATTTAAGGTCATTCCCTTACATTATTCATTAAAATATAGT
ATAAATTAAATATAAGTTCT

Downstream 100 bases:

>100_bases
AACAAAAACAAAAAATGTAAGTATTGAAACTTATTTTTAGATATTCATTTGCTTAAGTGTAATATGATAAAATAAAAATC
CCTTGAGTCTCAGAGGTTCA

Product: cold shock protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MAKSITVGKRENEKKRLAKREEKQKKKDSKKLSSKSSFDDMIAYVDENGMITSTPPAENIKKEEINLDEIIIATPKKEDE
EPVILRGRVEFFNEARGFGFIKDLAGVDKYFFHVNNVVGNISEGNIVTFDLERGVKGMNAVNICLEKKPVEN

Sequences:

>Translated_152_residues
MAKSITVGKRENEKKRLAKREEKQKKKDSKKLSSKSSFDDMIAYVDENGMITSTPPAENIKKEEINLDEIIIATPKKEDE
EPVILRGRVEFFNEARGFGFIKDLAGVDKYFFHVNNVVGNISEGNIVTFDLERGVKGMNAVNICLEKKPVEN
>Mature_151_residues
AKSITVGKRENEKKRLAKREEKQKKKDSKKLSSKSSFDDMIAYVDENGMITSTPPAENIKKEEINLDEIIIATPKKEDEE
PVILRGRVEFFNEARGFGFIKDLAGVDKYFFHVNNVVGNISEGNIVTFDLERGVKGMNAVNICLEKKPVEN

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 8300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17209; Mature: 17078

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSITVGKRENEKKRLAKREEKQKKKDSKKLSSKSSFDDMIAYVDENGMITSTPPAENI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCEEECCCCCCCC
KKEEINLDEIIIATPKKEDEEPVILRGRVEFFNEARGFGFIKDLAGVDKYFFHVNNVVGN
CCCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
ISEGNIVTFDLERGVKGMNAVNICLEKKPVEN
CCCCCEEEEECCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
AKSITVGKRENEKKRLAKREEKQKKKDSKKLSSKSSFDDMIAYVDENGMITSTPPAENI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCEEECCCCCCCC
KKEEINLDEIIIATPKKEDEEPVILRGRVEFFNEARGFGFIKDLAGVDKYFFHVNNVVGN
CCCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
ISEGNIVTFDLERGVKGMNAVNICLEKKPVEN
CCCCCEEEEECCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA