| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347286
Identifier: 29347286
GI number: 29347286
Start: 2361009
End: 2362022
Strand: Reverse
Name: 29347286
Synonym: BT_1876
Alternate gene names: NA
Gene position: 2362022-2361009 (Counterclockwise)
Preceding gene: 29347287
Following gene: 29347285
Centisome position: 37.73
GC content: 41.72
Gene sequence:
>1014_bases ATGGAAGAAGAAAATAAACATATTGATGAACTGATTGCCAACTATCTGACTGAAGGTCTGGATAAGAATGCTTTAGATGA ACTAAAAACATGGATTGCCGCATCGGCTGAAAATCAGCAATATTTTATCCGTCAGCGGGAGATCTGGTTTTCAGCTGTAA GTCGTGAGGCCGCATCTGTCTATGATAAGGATAAAGCGTTTGAGAATTTTAGAAACCGTGTCGAAAGTCAGAAGGAAATT CAGAGCACTTCCCGTCGAGGTTTTAGCCTGTCAGCGTTGTGGCGTTATGCTGCGGTTGTTGCAATCATAATAGCGGTGGG ATGTATTTCTTATTGGCAGGGAGAGGTGAATGTGAAAGATACTTTTGCAGATATTTCGGTAGAAGCCCCTTTAGGATCAA AAACAAAACTTTATTTGCCGGATGGCACATTGGTCTGGCTTAATGCCGGTTCACGCATGACATACTCGCAGGGGTTTGGT GTCGATAACCGAAAAGTAGAACTGGAAGGGGAAGGATATTTTGAGGTAAAGCGGAATGAGAAGATTCCCTTTTTCGTAAA GACTAAAGATCTGCAATTACAGGTGTTGGGAACAAAATTCAATTTCCGTGACTATCCGGAAGATCATGAAGTGGTCGTTT CTTTGTTGGAAGGTAAGGTCGGATTGAACAACTTGTTGAGAGAAGAAAAAGAAGCTGTCCTTTCACCTGATGAAAGGGCC GTATTAAATAAGGCGAACGGGCTTTTGACTGTAGAGTCGGTTACCGCATCCAATGCGTCTCAGTGGACGGACGGTTACTT GTTTTTTGATGAAGAACTCTTGCCGGATATCGCTAAAGAACTGGAACGCAGCTATAATGTAAAGATTCACATAGCCAATG ATTCCTTAAAAACATTCCGCTTCTATGGCAACTTCGTTCGTCGCGAACAAAATATCCAGGAAGTACTGGAAGCACTGGCT TCTACGGAAAAAATGCAATATAAGATTGAAGAACGTAATATAACTATCTATTAA
Upstream 100 bases:
>100_bases ATTTCTCTATTACTATTTTTTTTCAGGTAAAGCGAAAAAAAATCATTTTCTGACTACCCTTAATTAAAAAACAACTGTCT CCTTTATAGAAAGCATAAAT
Downstream 100 bases:
>100_bases CCGGTTACCAGAGATTATAATGCTATGATTGTTTAACCTTAAAAAATGAAAAGTATGAATAAAGAGAAAAATACAGAATA ATCTTTAGCTGACAAATAAG
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MEEENKHIDELIANYLTEGLDKNALDELKTWIAASAENQQYFIRQREIWFSAVSREAASVYDKDKAFENFRNRVESQKEI QSTSRRGFSLSALWRYAAVVAIIIAVGCISYWQGEVNVKDTFADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFG VDNRKVELEGEGYFEVKRNEKIPFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERA VLNKANGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKIHIANDSLKTFRFYGNFVRREQNIQEVLEALA STEKMQYKIEERNITIY
Sequences:
>Translated_337_residues MEEENKHIDELIANYLTEGLDKNALDELKTWIAASAENQQYFIRQREIWFSAVSREAASVYDKDKAFENFRNRVESQKEI QSTSRRGFSLSALWRYAAVVAIIIAVGCISYWQGEVNVKDTFADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFG VDNRKVELEGEGYFEVKRNEKIPFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERA VLNKANGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKIHIANDSLKTFRFYGNFVRREQNIQEVLEALA STEKMQYKIEERNITIY >Mature_337_residues MEEENKHIDELIANYLTEGLDKNALDELKTWIAASAENQQYFIRQREIWFSAVSREAASVYDKDKAFENFRNRVESQKEI QSTSRRGFSLSALWRYAAVVAIIIAVGCISYWQGEVNVKDTFADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFG VDNRKVELEGEGYFEVKRNEKIPFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERA VLNKANGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKIHIANDSLKTFRFYGNFVRREQNIQEVLEALA STEKMQYKIEERNITIY
Specific function: Unknown
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38723; Mature: 38723
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEENKHIDELIANYLTEGLDKNALDELKTWIAASAENQQYFIRQREIWFSAVSREAASV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YDKDKAFENFRNRVESQKEIQSTSRRGFSLSALWRYAAVVAIIIAVGCISYWQGEVNVKD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE TFADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFGVDNRKVELEGEGYFEVKRNE EEEEEEEECCCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCEEEECCCCEEEEECCC KIPFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERA CCCEEEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH VLNKANGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKIHIANDSLKTFR HHHCCCCEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCHHHHH FYGNFVRREQNIQEVLEALASTEKMQYKIEERNITIY HHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCEEEC >Mature Secondary Structure MEEENKHIDELIANYLTEGLDKNALDELKTWIAASAENQQYFIRQREIWFSAVSREAASV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YDKDKAFENFRNRVESQKEIQSTSRRGFSLSALWRYAAVVAIIIAVGCISYWQGEVNVKD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE TFADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFGVDNRKVELEGEGYFEVKRNE EEEEEEEECCCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCEEEECCCCEEEEECCC KIPFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERA CCCEEEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH VLNKANGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKIHIANDSLKTFR HHHCCCCEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCEEEEEECCCHHHHH FYGNFVRREQNIQEVLEALASTEKMQYKIEERNITIY HHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA