Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347182

Identifier: 29347182

GI number: 29347182

Start: 2200884

End: 2202164

Strand: Reverse

Name: 29347182

Synonym: BT_1772

Alternate gene names: NA

Gene position: 2202164-2200884 (Counterclockwise)

Preceding gene: 29347183

Following gene: 29347181

Centisome position: 35.18

GC content: 44.65

Gene sequence:

>1281_bases
ATGAAAAAGTATAAGATTTTTAATAAGACAGGTCTTGCAATATGCCTGACGTTGGGACTGGTGGCCGGATCGGCCTGTTC
ACCGACAGATGACGGTCCTTCCATCGATGATCATTTCTTGAACTATGAGATTCCGCAAATCAGACCGAGCAGCGATATTC
CGGTAGGAGCCATTTATTGGAACTTGGGTAGTACGGGTGTGGATGAAAAGAAGTATGCGCGGTTGATTGGTGAATATAAT
CAGAGCGGACAGTATCCACAGCTTTGTCCGAATGTGCGTCCGGTGCTGGGACGTTATTCGATGGATATCAATAAAGCCGA
AACAGCCGATTTGATTCAGCAGCACCTTACCTGGGCAAATAATGCCGGTATCAATTTCCTTATCTTGCCGAACATCGGTC
TGGATACCAGTAAGGGAGATTTGCTGAACGAAGGTAACGTGAATTTCGTGAACTATATGGCGGGACTGAATCCCAACTCG
GAAGGTATCGAATGGGGTGGCTTGCGTTATGCGGTTTCTATGGATATGAATAACTTCGCAAACGGACTTAACAACACCGC
CATGATAGAAGACGATGCCGATGAAAATGGTGTCTCTGCACGTTGTGAGCAACTTTACAGCTTTTTTGTCAACCTGACAA
GCCGTTTCTGTACGAACAACGATCTTTACTATACTGTAGACGGCAAACCGATGATTGTTGTCTGGAATGCTGACAAGTTG
TATGCACGCGATTCAGAGAAACTCTATAATACGATCCGTGAAAGAGTGCGTGAAAATGTAAAGGACGGCAATGGCAATGG
ACTGGAGATCTATATTTTAGCACGTCAGGAACGTTGGACACCTCCTGCACGCTGGCATAACTTCTTCCTGAGCGGAAAAG
TGGATGCTGTGTACATGGATAATATGTACAATCAGACCGACTGGTTCCGCCCTACCTGCTATCCGCAGTGCATCGACCAG
AACTTTAAGTACAACCGCGAATATGAGTGGGCTAATTACGGAGTAGACTTCGTACCTAGCGTTTCACCTTCGTTCAATCA
GTGGATAGATGGTGATGGAACTCAGTTCTATAACTTCCCGGTGGTATTTAAGGATGAAGATATGTTCCGTAAGATGTGTA
ATGTTGCCAAGATGAACTTGGGAAAGCGTCCGATGGTCATCATCGATTCTTTTAACCGTTGGAATGTGGATCAGGCTATC
GAACCGACTGACCCGAATTACGGGAATGGATACGGTATGAAATACCTTAATATTGTAAAAGAAGAATTTAAAGTGAAATA
A

Upstream 100 bases:

>100_bases
GGAGGCTGAAGAGGCTTTGGACAAGGCTTACAACTTCTTGATAGAAGCTACACTTTTAGTTTATAAGGTAGAAAAGTAGT
AATTAAGTAATGACTGAAAA

Downstream 100 bases:

>100_bases
GCATGAAAGCGATAAATTTTATCAATTGGAAATATATCGGCTTGACCGGATGTTTGGTGGCATCGTTACTGACTGCATGT
GGTGACGATGAAACTGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKKYKIFNKTGLAICLTLGLVAGSACSPTDDGPSIDDHFLNYEIPQIRPSSDIPVGAIYWNLGSTGVDEKKYARLIGEYN
QSGQYPQLCPNVRPVLGRYSMDINKAETADLIQQHLTWANNAGINFLILPNIGLDTSKGDLLNEGNVNFVNYMAGLNPNS
EGIEWGGLRYAVSMDMNNFANGLNNTAMIEDDADENGVSARCEQLYSFFVNLTSRFCTNNDLYYTVDGKPMIVVWNADKL
YARDSEKLYNTIRERVRENVKDGNGNGLEIYILARQERWTPPARWHNFFLSGKVDAVYMDNMYNQTDWFRPTCYPQCIDQ
NFKYNREYEWANYGVDFVPSVSPSFNQWIDGDGTQFYNFPVVFKDEDMFRKMCNVAKMNLGKRPMVIIDSFNRWNVDQAI
EPTDPNYGNGYGMKYLNIVKEEFKVK

Sequences:

>Translated_426_residues
MKKYKIFNKTGLAICLTLGLVAGSACSPTDDGPSIDDHFLNYEIPQIRPSSDIPVGAIYWNLGSTGVDEKKYARLIGEYN
QSGQYPQLCPNVRPVLGRYSMDINKAETADLIQQHLTWANNAGINFLILPNIGLDTSKGDLLNEGNVNFVNYMAGLNPNS
EGIEWGGLRYAVSMDMNNFANGLNNTAMIEDDADENGVSARCEQLYSFFVNLTSRFCTNNDLYYTVDGKPMIVVWNADKL
YARDSEKLYNTIRERVRENVKDGNGNGLEIYILARQERWTPPARWHNFFLSGKVDAVYMDNMYNQTDWFRPTCYPQCIDQ
NFKYNREYEWANYGVDFVPSVSPSFNQWIDGDGTQFYNFPVVFKDEDMFRKMCNVAKMNLGKRPMVIIDSFNRWNVDQAI
EPTDPNYGNGYGMKYLNIVKEEFKVK
>Mature_426_residues
MKKYKIFNKTGLAICLTLGLVAGSACSPTDDGPSIDDHFLNYEIPQIRPSSDIPVGAIYWNLGSTGVDEKKYARLIGEYN
QSGQYPQLCPNVRPVLGRYSMDINKAETADLIQQHLTWANNAGINFLILPNIGLDTSKGDLLNEGNVNFVNYMAGLNPNS
EGIEWGGLRYAVSMDMNNFANGLNNTAMIEDDADENGVSARCEQLYSFFVNLTSRFCTNNDLYYTVDGKPMIVVWNADKL
YARDSEKLYNTIRERVRENVKDGNGNGLEIYILARQERWTPPARWHNFFLSGKVDAVYMDNMYNQTDWFRPTCYPQCIDQ
NFKYNREYEWANYGVDFVPSVSPSFNQWIDGDGTQFYNFPVVFKDEDMFRKMCNVAKMNLGKRPMVIIDSFNRWNVDQAI
EPTDPNYGNGYGMKYLNIVKEEFKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48719; Mature: 48719

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYKIFNKTGLAICLTLGLVAGSACSPTDDGPSIDDHFLNYEIPQIRPSSDIPVGAIYW
CCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEE
NLGSTGVDEKKYARLIGEYNQSGQYPQLCPNVRPVLGRYSMDINKAETADLIQQHLTWAN
ECCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCC
NAGINFLILPNIGLDTSKGDLLNEGNVNFVNYMAGLNPNSEGIEWGGLRYAVSMDMNNFA
CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCEEEEEEECHHHHH
NGLNNTAMIEDDADENGVSARCEQLYSFFVNLTSRFCTNNDLYYTVDGKPMIVVWNADKL
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCE
YARDSEKLYNTIRERVRENVKDGNGNGLEIYILARQERWTPPARWHNFFLSGKVDAVYMD
ECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHEEEECCCEEEEEEC
NMYNQTDWFRPTCYPQCIDQNFKYNREYEWANYGVDFVPSVSPSFNQWIDGDGTQFYNFP
CCCCCCCCCCCCCCHHHHCCCCCCCCCEEHHCCCCCCCCCCCCCHHHCCCCCCCEEEECC
VVFKDEDMFRKMCNVAKMNLGKRPMVIIDSFNRWNVDQAIEPTDPNYGNGYGMKYLNIVK
EEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
EEFKVK
HHHCCC
>Mature Secondary Structure
MKKYKIFNKTGLAICLTLGLVAGSACSPTDDGPSIDDHFLNYEIPQIRPSSDIPVGAIYW
CCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEE
NLGSTGVDEKKYARLIGEYNQSGQYPQLCPNVRPVLGRYSMDINKAETADLIQQHLTWAN
ECCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCC
NAGINFLILPNIGLDTSKGDLLNEGNVNFVNYMAGLNPNSEGIEWGGLRYAVSMDMNNFA
CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCEEEEEEECHHHHH
NGLNNTAMIEDDADENGVSARCEQLYSFFVNLTSRFCTNNDLYYTVDGKPMIVVWNADKL
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCE
YARDSEKLYNTIRERVRENVKDGNGNGLEIYILARQERWTPPARWHNFFLSGKVDAVYMD
ECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHEEEECCCEEEEEEC
NMYNQTDWFRPTCYPQCIDQNFKYNREYEWANYGVDFVPSVSPSFNQWIDGDGTQFYNFP
CCCCCCCCCCCCCCHHHHCCCCCCCCCEEHHCCCCCCCCCCCCCHHHCCCCCCCEEEECC
VVFKDEDMFRKMCNVAKMNLGKRPMVIIDSFNRWNVDQAIEPTDPNYGNGYGMKYLNIVK
EEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
EEFKVK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA