| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347110
Identifier: 29347110
GI number: 29347110
Start: 2098455
End: 2099654
Strand: Reverse
Name: 29347110
Synonym: BT_1700
Alternate gene names: NA
Gene position: 2099654-2098455 (Counterclockwise)
Preceding gene: 29347111
Following gene: 29347109
Centisome position: 33.54
GC content: 42.0
Gene sequence:
>1200_bases ATGGAAGATTTGCAGAGATTATATCCTATAGGGATACAGACATTTTCTAAGATTCGTGAGGGAAATTTCCTCTATGTAGA TAAGACAGAATACGTTTACCGGATGACGCATTCTGCTTCCAGTTATATGTTCCTGAGCCGTCCGCGTCGTTTTGGTAAAT CATTGTTAACCTCTACGTTGCATAGCTATTTCTCCGGTCGTGAAGAACTGTTTCGTGGATTGGCGATGGAGAAGCTGGAG AAAGAATGGATACAGTATCCGGTTCTGCACTTCGATATGAGTATGGCCAAGCACGTGGACAAAGATAAACTGATGAATCT TTTAGACTTCATGCTAACAGAACACGAACGTACACTAGGGATTGATGCAGCAGGTACAGACCCTAATTTGCGCCTGACTA ATCTGATAAAACGTGCTTATGAACAGACTGGCAGGAAGGTCGTGGTCCTTATTGATGAATATGACGCTCCTTTGCTGGAT GTGGTACACGAACGGGAGAACTTGGGGGTATTGCGTGACGTTATGCGTAACTTCTATAGTCCGTTGAAAGCCTGTGATCC TTATTTGCGCTATGTGTTTCTTACAGGTATCACTAAATTCTCACAGCTCAGCATTTTCAGTGAACTCAATAACATCAAAA ATATCAGCATGGATGAACCTTATGCTGCCATTTGTGGCATAACGGAGAATGAGATACTTACCCAAATGAAAGAAGATGTG GATAGGATGGCTGTCAAATTGAATATTACTGCGGAGGAAGTACTGGCTAAGTTGAAAGAGAATTATGACGGCTATCATTT CACTTATCCATCGCCCGACATCTATAATCCATTCAGTCTGCTCAATGCTTTTGCAGATGGGAAATTTAATTCTTATTGGT TTGGTAGCGGCACTCCTACCTATCTGATAAAGATGCTGGATAAGTTTGGAGTAGAGCCTTCTGAAATAGGAAATAAATTG GCGGCGGTCGAAGAATTTGATGCTCCCACTGAAACGATGAGTAGCATTACTCCATTGCTGTATCAAAGCGGCTATGTCAC TATCAAGGATTACGATAAGGAATTGGAACTATATACGTTGGATATTCCTAATAAAGAGGTGAGGGTGGGATTGATGCGAA GCTTGTTGCCTTATTATGTAACCAATGACACACGTGAGGCGACGAACATGGTGGCTTTTATTTCCCGTGATATCCGGTAA
Upstream 100 bases:
>100_bases AGTGAATGAGTGGGCAAAACTTTATATTCGATATAAGAAGGAGAAGAATGACATTTGAATATTGGAATTTTTTAGTAGCT TTGTGAAAAAGAAAGTTGTT
Downstream 100 bases:
>100_bases AGGTGATATGGACGCGGCATTACGGCGTTTGCAAACCTTTCTGTCTACTATACCTCAATGCGATCATACAAAGTACGAAG GTCATTACCAGCAGGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MEDLQRLYPIGIQTFSKIREGNFLYVDKTEYVYRMTHSASSYMFLSRPRRFGKSLLTSTLHSYFSGREELFRGLAMEKLE KEWIQYPVLHFDMSMAKHVDKDKLMNLLDFMLTEHERTLGIDAAGTDPNLRLTNLIKRAYEQTGRKVVVLIDEYDAPLLD VVHERENLGVLRDVMRNFYSPLKACDPYLRYVFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITENEILTQMKEDV DRMAVKLNITAEEVLAKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFGVEPSEIGNKL AAVEEFDAPTETMSSITPLLYQSGYVTIKDYDKELELYTLDIPNKEVRVGLMRSLLPYYVTNDTREATNMVAFISRDIR
Sequences:
>Translated_399_residues MEDLQRLYPIGIQTFSKIREGNFLYVDKTEYVYRMTHSASSYMFLSRPRRFGKSLLTSTLHSYFSGREELFRGLAMEKLE KEWIQYPVLHFDMSMAKHVDKDKLMNLLDFMLTEHERTLGIDAAGTDPNLRLTNLIKRAYEQTGRKVVVLIDEYDAPLLD VVHERENLGVLRDVMRNFYSPLKACDPYLRYVFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITENEILTQMKEDV DRMAVKLNITAEEVLAKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFGVEPSEIGNKL AAVEEFDAPTETMSSITPLLYQSGYVTIKDYDKELELYTLDIPNKEVRVGLMRSLLPYYVTNDTREATNMVAFISRDIR >Mature_399_residues MEDLQRLYPIGIQTFSKIREGNFLYVDKTEYVYRMTHSASSYMFLSRPRRFGKSLLTSTLHSYFSGREELFRGLAMEKLE KEWIQYPVLHFDMSMAKHVDKDKLMNLLDFMLTEHERTLGIDAAGTDPNLRLTNLIKRAYEQTGRKVVVLIDEYDAPLLD VVHERENLGVLRDVMRNFYSPLKACDPYLRYVFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITENEILTQMKEDV DRMAVKLNITAEEVLAKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPTYLIKMLDKFGVEPSEIGNKL AAVEEFDAPTETMSSITPLLYQSGYVTIKDYDKELELYTLDIPNKEVRVGLMRSLLPYYVTNDTREATNMVAFISRDIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 46203; Mature: 46203
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLQRLYPIGIQTFSKIREGNFLYVDKTEYVYRMTHSASSYMFLSRPRRFGKSLLTSTL CCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HSYFSGREELFRGLAMEKLEKEWIQYPVLHFDMSMAKHVDKDKLMNLLDFMLTEHERTLG HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCC IDAAGTDPNLRLTNLIKRAYEQTGRKVVVLIDEYDAPLLDVVHERENLGVLRDVMRNFYS CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHH PLKACDPYLRYVFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITENEILTQMKEDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHH DRMAVKLNITAEEVLAKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPT HHEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCHH YLIKMLDKFGVEPSEIGNKLAAVEEFDAPTETMSSITPLLYQSGYVTIKDYDKELELYTL HHHHHHHHHCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE DIPNKEVRVGLMRSLLPYYVTNDTREATNMVAFISRDIR ECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MEDLQRLYPIGIQTFSKIREGNFLYVDKTEYVYRMTHSASSYMFLSRPRRFGKSLLTSTL CCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HSYFSGREELFRGLAMEKLEKEWIQYPVLHFDMSMAKHVDKDKLMNLLDFMLTEHERTLG HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCC IDAAGTDPNLRLTNLIKRAYEQTGRKVVVLIDEYDAPLLDVVHERENLGVLRDVMRNFYS CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHH PLKACDPYLRYVFLTGITKFSQLSIFSELNNIKNISMDEPYAAICGITENEILTQMKEDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHH DRMAVKLNITAEEVLAKLKENYDGYHFTYPSPDIYNPFSLLNAFADGKFNSYWFGSGTPT HHEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCCCHH YLIKMLDKFGVEPSEIGNKLAAVEEFDAPTETMSSITPLLYQSGYVTIKDYDKELELYTL HHHHHHHHHCCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE DIPNKEVRVGLMRSLLPYYVTNDTREATNMVAFISRDIR ECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]