Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347092

Identifier: 29347092

GI number: 29347092

Start: 2073899

End: 2075854

Strand: Reverse

Name: 29347092

Synonym: BT_1682

Alternate gene names: NA

Gene position: 2075854-2073899 (Counterclockwise)

Preceding gene: 29347093

Following gene: 29347091

Centisome position: 33.16

GC content: 42.18

Gene sequence:

>1956_bases
ATGAAAAAGATATATAGTTTAGTTCTACTTGTTGCCGGTGTTTTTTCTTGGGGCTCTTGCAGTCTTGATGAAGTGAACCC
CAACAACTCGGGTCAGTTCTCCGATGGTTCTTATACATTGGAAACTTATAAGGCATTCACCAACTCGTGCTATACAGCCT
TGATCAACAACATCTATCAGAGTAGTGACTATCTGGTTTGTACGGAAGCGGGTACTGATATTTGGGAAGAACCTAAATCG
GGCTCCAGCTATCAGCGTTATCATAGTTATAACGGTATGAAAACCGATGATAGCTATTATTATAAAGTGTGGCAATATTC
TTATCTGTGTATCAACAGCTGTAATATTGTGATTGACGGAGCTGAGAATGTGACAGGGGATGAGACTGAAATTAATGAAT
GTGTGGCACAGGCCAGATGTCTGCGTGCTTACTATTATATGAATCTGGTGGAGCAGTTTGGAAATGTCGATTTGCAGTTG
AAGGCTGCCGATAGCGAGAATATTTCTTTTGATGCTCACCGTTCTACCGTTCCCGAAATTTATGCTGCCATTATCGAAGA
CCTGAAGTTTGCCGTAGAGAATCTGCCTGTAAGTTTCAGTGATTACTATAGCCGCGTTACAAAGAAATCGGCGATGGGAT
TATTGGCACGTGCATATATTAATGGTGCCGGTTATGATCTGAAAGATACCGATGGTGTCAGCTTTCTGGAAAAAGCCTAT
GATACGGCGACAACCATGATTAATAATAAAGCGATTTATGAGTGGTATATGCATCCTGCTTTTGCCGATGTATTCAACGA
AAATAATAATCGTAACAATGAAGAAGCTCTGTTCATTGCTGCGGGTGCCGAAAGAAATTCGGACGCTTACACCAATGGTA
ACTACTCACAAAGTGAAATGTTCCGTCACTTCTTACCTTCGTTGGGAACATATACGGATCTGGGTTTGGTAGACAAGACT
TCAAACTTCGTTTACGGTCGTCCGAACAGTAATATCTTCCTGCCATCCAAATATCTGATGGACTGTTTTGCTGCTGATAT
GAACGACTCTCGTTTTCGTTATTCATTTATTTCAGCTTACTCGTCTTATTCTATACCGGCATGGGGGGCGACTTATGAAT
ATGGAGGTTCAGCGTGTGCCAAAGAAATCACAAGCACACTTGCTACTAAATTTGGTATTCCCGCATCTAATATAGGTAAG
AAAGTTTATCCTCATTTTAACTTGGAATCCAATAGTACAGCCGATGCTAATTACTGCCAGCTGGCTATCTGGAATGCAGA
TGGAACAGCGAAGACTACTCAGGATAAAACAGATGGTAATATTCTTCATCCTGCTATGCCTTTAGATCCGGCAGAAGCTC
ATCAATATGCCGTTTATTGTTCTTTGAAGACGCTGACAGAAGAGGAAAAAGCTCAATATCCGGGGTTGGTTCTTAATGTT
TTCGATCTTTACGATGAGAATGGAACAGCCAGGGCTACCTATGACAAGCCTAGTGCTGCCAGTGCTTTGTGGTTATCTAT
TTATCCGGCTCTTTCTAAATTCAATATGCCGGGTAATAAGTTTGTCGGCAGAGACGTTCAGAGAAAAACTGTGGATGTGA
TGATCATGCGTATGGCGGAAGTTTACCTGATTGCTGCTGAAGCATCGGTACGCTTGAACAAGGGAGATGCTGCCAAATAT
ATTAATGTACTCCGTACGCGTGCCGGTGCCGGTACGGTCAGTGAGTCGCAAGTGGATCTGAATTATATTTTCGATGAATA
TGCCCGTGAACTTTGTGGCGAATGTGCCCGCTGGTATTTGCTGAAACGTAATGCTGCTTTTGAGACTCGTTTGGCTGCTT
ATAATAAGCGTGCTGCTGAGCACTTTAAGAAAGAATTCTATTTGCGTCCTATTCCTACGAAATATCTGGATGCGATCAAT
AATCCGGCAGAATTCGGACAAAACGCCGGTTATTAA

Upstream 100 bases:

>100_bases
ATGTGAAGAATTACGATCCGGAAATGAACGGAAGCATCAACTTCCCATTGTCTCGTGATTGCATATTTGGTCTTAATTTA
ACTTTCTAAAAAATAGCAAT

Downstream 100 bases:

>100_bases
TCAGTTAATTAATAATCAAGCATAATTAATAGGAGCCGGGCAGGAGATTTCTCTTGTCCGGCTCTTTGTTTCCATACCTG
TATCCTGCGTAAAAGTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Family Protein; SusD/RagB Family Protein

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MKKIYSLVLLVAGVFSWGSCSLDEVNPNNSGQFSDGSYTLETYKAFTNSCYTALINNIYQSSDYLVCTEAGTDIWEEPKS
GSSYQRYHSYNGMKTDDSYYYKVWQYSYLCINSCNIVIDGAENVTGDETEINECVAQARCLRAYYYMNLVEQFGNVDLQL
KAADSENISFDAHRSTVPEIYAAIIEDLKFAVENLPVSFSDYYSRVTKKSAMGLLARAYINGAGYDLKDTDGVSFLEKAY
DTATTMINNKAIYEWYMHPAFADVFNENNNRNNEEALFIAAGAERNSDAYTNGNYSQSEMFRHFLPSLGTYTDLGLVDKT
SNFVYGRPNSNIFLPSKYLMDCFAADMNDSRFRYSFISAYSSYSIPAWGATYEYGGSACAKEITSTLATKFGIPASNIGK
KVYPHFNLESNSTADANYCQLAIWNADGTAKTTQDKTDGNILHPAMPLDPAEAHQYAVYCSLKTLTEEEKAQYPGLVLNV
FDLYDENGTARATYDKPSAASALWLSIYPALSKFNMPGNKFVGRDVQRKTVDVMIMRMAEVYLIAAEASVRLNKGDAAKY
INVLRTRAGAGTVSESQVDLNYIFDEYARELCGECARWYLLKRNAAFETRLAAYNKRAAEHFKKEFYLRPIPTKYLDAIN
NPAEFGQNAGY

Sequences:

>Translated_651_residues
MKKIYSLVLLVAGVFSWGSCSLDEVNPNNSGQFSDGSYTLETYKAFTNSCYTALINNIYQSSDYLVCTEAGTDIWEEPKS
GSSYQRYHSYNGMKTDDSYYYKVWQYSYLCINSCNIVIDGAENVTGDETEINECVAQARCLRAYYYMNLVEQFGNVDLQL
KAADSENISFDAHRSTVPEIYAAIIEDLKFAVENLPVSFSDYYSRVTKKSAMGLLARAYINGAGYDLKDTDGVSFLEKAY
DTATTMINNKAIYEWYMHPAFADVFNENNNRNNEEALFIAAGAERNSDAYTNGNYSQSEMFRHFLPSLGTYTDLGLVDKT
SNFVYGRPNSNIFLPSKYLMDCFAADMNDSRFRYSFISAYSSYSIPAWGATYEYGGSACAKEITSTLATKFGIPASNIGK
KVYPHFNLESNSTADANYCQLAIWNADGTAKTTQDKTDGNILHPAMPLDPAEAHQYAVYCSLKTLTEEEKAQYPGLVLNV
FDLYDENGTARATYDKPSAASALWLSIYPALSKFNMPGNKFVGRDVQRKTVDVMIMRMAEVYLIAAEASVRLNKGDAAKY
INVLRTRAGAGTVSESQVDLNYIFDEYARELCGECARWYLLKRNAAFETRLAAYNKRAAEHFKKEFYLRPIPTKYLDAIN
NPAEFGQNAGY
>Mature_651_residues
MKKIYSLVLLVAGVFSWGSCSLDEVNPNNSGQFSDGSYTLETYKAFTNSCYTALINNIYQSSDYLVCTEAGTDIWEEPKS
GSSYQRYHSYNGMKTDDSYYYKVWQYSYLCINSCNIVIDGAENVTGDETEINECVAQARCLRAYYYMNLVEQFGNVDLQL
KAADSENISFDAHRSTVPEIYAAIIEDLKFAVENLPVSFSDYYSRVTKKSAMGLLARAYINGAGYDLKDTDGVSFLEKAY
DTATTMINNKAIYEWYMHPAFADVFNENNNRNNEEALFIAAGAERNSDAYTNGNYSQSEMFRHFLPSLGTYTDLGLVDKT
SNFVYGRPNSNIFLPSKYLMDCFAADMNDSRFRYSFISAYSSYSIPAWGATYEYGGSACAKEITSTLATKFGIPASNIGK
KVYPHFNLESNSTADANYCQLAIWNADGTAKTTQDKTDGNILHPAMPLDPAEAHQYAVYCSLKTLTEEEKAQYPGLVLNV
FDLYDENGTARATYDKPSAASALWLSIYPALSKFNMPGNKFVGRDVQRKTVDVMIMRMAEVYLIAAEASVRLNKGDAAKY
INVLRTRAGAGTVSESQVDLNYIFDEYARELCGECARWYLLKRNAAFETRLAAYNKRAAEHFKKEFYLRPIPTKYLDAIN
NPAEFGQNAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73078; Mature: 73078

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYSLVLLVAGVFSWGSCSLDEVNPNNSGQFSDGSYTLETYKAFTNSCYTALINNIYQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHC
SSDYLVCTEAGTDIWEEPKSGSSYQRYHSYNGMKTDDSYYYKVWQYSYLCINSCNIVIDG
CCCEEEEECCCCCHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCEEEEEC
AENVTGDETEINECVAQARCLRAYYYMNLVEQFGNVDLQLKAADSENISFDAHRSTVPEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCHHCHHHHH
YAAIIEDLKFAVENLPVSFSDYYSRVTKKSAMGLLARAYINGAGYDLKDTDGVSFLEKAY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
DTATTMINNKAIYEWYMHPAFADVFNENNNRNNEEALFIAAGAERNSDAYTNGNYSQSEM
HHHHHHCCCCEEEEEHHCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
FRHFLPSLGTYTDLGLVDKTSNFVYGRPNSNIFLPSKYLMDCFAADMNDSRFRYSFISAY
HHHHHHCCCCCCCCCCEECCCCEEEECCCCCEECCHHHHHHHHHCCCCCCCEEHHHHHHH
SSYSIPAWGATYEYGGSACAKEITSTLATKFGIPASNIGKKVYPHFNLESNSTADANYCQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEE
LAIWNADGTAKTTQDKTDGNILHPAMPLDPAEAHQYAVYCSLKTLTEEEKAQYPGLVLNV
EEEECCCCCCCCCCCCCCCCEECCCCCCCHHHCCCEEEEEEEHHHCCHHHHCCCCEEEEE
FDLYDENGTARATYDKPSAASALWLSIYPALSKFNMPGNKFVGRDVQRKTVDVMIMRMAE
EEHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VYLIAAEASVRLNKGDAAKYINVLRTRAGAGTVSESQVDLNYIFDEYARELCGECARWYL
HEEEEECCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKRNAAFETRLAAYNKRAAEHFKKEFYLRPIPTKYLDAINNPAEFGQNAGY
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure
MKKIYSLVLLVAGVFSWGSCSLDEVNPNNSGQFSDGSYTLETYKAFTNSCYTALINNIYQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHC
SSDYLVCTEAGTDIWEEPKSGSSYQRYHSYNGMKTDDSYYYKVWQYSYLCINSCNIVIDG
CCCEEEEECCCCCHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCEEEEEC
AENVTGDETEINECVAQARCLRAYYYMNLVEQFGNVDLQLKAADSENISFDAHRSTVPEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCHHCHHHHH
YAAIIEDLKFAVENLPVSFSDYYSRVTKKSAMGLLARAYINGAGYDLKDTDGVSFLEKAY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
DTATTMINNKAIYEWYMHPAFADVFNENNNRNNEEALFIAAGAERNSDAYTNGNYSQSEM
HHHHHHCCCCEEEEEHHCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
FRHFLPSLGTYTDLGLVDKTSNFVYGRPNSNIFLPSKYLMDCFAADMNDSRFRYSFISAY
HHHHHHCCCCCCCCCCEECCCCEEEECCCCCEECCHHHHHHHHHCCCCCCCEEHHHHHHH
SSYSIPAWGATYEYGGSACAKEITSTLATKFGIPASNIGKKVYPHFNLESNSTADANYCQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEE
LAIWNADGTAKTTQDKTDGNILHPAMPLDPAEAHQYAVYCSLKTLTEEEKAQYPGLVLNV
EEEECCCCCCCCCCCCCCCCEECCCCCCCHHHCCCEEEEEEEHHHCCHHHHCCCCEEEEE
FDLYDENGTARATYDKPSAASALWLSIYPALSKFNMPGNKFVGRDVQRKTVDVMIMRMAE
EEHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VYLIAAEASVRLNKGDAAKYINVLRTRAGAGTVSESQVDLNYIFDEYARELCGECARWYL
HEEEEECCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKRNAAFETRLAAYNKRAAEHFKKEFYLRPIPTKYLDAINNPAEFGQNAGY
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA