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The map label for this gene is kdsC [H]

Identifier: 29347087

GI number: 29347087

Start: 2070593

End: 2071114

Strand: Reverse

Name: kdsC [H]

Synonym: BT_1677

Alternate gene names: 29347087

Gene position: 2071114-2070593 (Counterclockwise)

Preceding gene: 29347088

Following gene: 29347086

Centisome position: 33.08

GC content: 47.32

Gene sequence:

>522_bases
ATGAGCACCATCAATTATGATCTATCCCGCATCAAAGCACTGGCTTTTGATGTTGACGGAGTATTGAGTTCGACAACAGT
CCCGTTGCATCCTTCCGGAGAACCGATGCGTACGGTGAATATTAAAGACGGTTATGCCATTCAGTTGGCAGTAAAGAAAG
GACTCCATATTGCTATCATTACCGGTGGACGGACAGAAGCGGTACGTATCCGGTTTGCAGCATTGGGTGTGAAGGATCTG
TATATGGGGTCTGCAGTGAAAATTCATGATTACCGTAATTTCCGCGATAAATACGGTCTGTCTGATGACGAAATTCTGTA
TATGGGCGATGATGTGCCTGATATAGAAGTGATGCGTGAGTGCGGGTTGCCTTGTTGTCCCAAAGATGCTGTTCCGGAAG
TTAAGTCGGTCGCGAAGTATATATCTTATGCCGATGGCGGTCGTGGCTGTGGACGTGATGTGGTGGAACAAGTATTGAAA
GCTCATGGCAAGTGGATGGCGGAAGATGCTTTCGGCTGGTGA

Upstream 100 bases:

>100_bases
GCTGTACGCTATGACGAGAATGTGATGAATAAGCATCTTTCTATGCTGGCAGACAGTCAGGCATTGCAGGAAATTTATAA
ATTAATGAGTAAAAGTATCC

Downstream 100 bases:

>100_bases
GTTGTAAATCACTTAATAATAAATAAAATTATGCTTGGAAATTTAGATAAATATCAGATTATATTAGCCTCCAATTCTCC
CCGCCGGAAAGAACTGATGT

Product: putative hydrolase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSTINYDLSRIKALAFDVDGVLSSTTVPLHPSGEPMRTVNIKDGYAIQLAVKKGLHIAIITGGRTEAVRIRFAALGVKDL
YMGSAVKIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRECGLPCCPKDAVPEVKSVAKYISYADGGRGCGRDVVEQVLK
AHGKWMAEDAFGW

Sequences:

>Translated_173_residues
MSTINYDLSRIKALAFDVDGVLSSTTVPLHPSGEPMRTVNIKDGYAIQLAVKKGLHIAIITGGRTEAVRIRFAALGVKDL
YMGSAVKIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRECGLPCCPKDAVPEVKSVAKYISYADGGRGCGRDVVEQVLK
AHGKWMAEDAFGW
>Mature_172_residues
STINYDLSRIKALAFDVDGVLSSTTVPLHPSGEPMRTVNIKDGYAIQLAVKKGLHIAIITGGRTEAVRIRFAALGVKDLY
MGSAVKIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRECGLPCCPKDAVPEVKSVAKYISYADGGRGCGRDVVEQVLKA
HGKWMAEDAFGW

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Escherichia coli, GI2367202, Length=155, Percent_Identity=36.1290322580645, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 19014; Mature: 18883

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTINYDLSRIKALAFDVDGVLSSTTVPLHPSGEPMRTVNIKDGYAIQLAVKKGLHIAII
CCCCCHHHHHHHHHHHCCCCHHCCCEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEE
TGGRTEAVRIRFAALGVKDLYMGSAVKIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRE
ECCCCEEEEEEEEHHCHHHHHCCCEEEEECCCCHHHHCCCCCCCEEEECCCCCHHHHHHH
CGLPCCPKDAVPEVKSVAKYISYADGGRGCGRDVVEQVLKAHGKWMAEDAFGW
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
STINYDLSRIKALAFDVDGVLSSTTVPLHPSGEPMRTVNIKDGYAIQLAVKKGLHIAII
CCCCHHHHHHHHHHHCCCCHHCCCEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEE
TGGRTEAVRIRFAALGVKDLYMGSAVKIHDYRNFRDKYGLSDDEILYMGDDVPDIEVMRE
ECCCCEEEEEEEEHHCHHHHHCCCEEEEECCCCHHHHCCCCCCCEEEECCCCCHHHHHHH
CGLPCCPKDAVPEVKSVAKYISYADGGRGCGRDVVEQVLKAHGKWMAEDAFGW
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]