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The map label for this gene is ykrA [H]

Identifier: 29347076

GI number: 29347076

Start: 2058889

End: 2059665

Strand: Reverse

Name: ykrA [H]

Synonym: BT_1666

Alternate gene names: 29347076

Gene position: 2059665-2058889 (Counterclockwise)

Preceding gene: 29347077

Following gene: 29347075

Centisome position: 32.9

GC content: 42.86

Gene sequence:

>777_bases
ATGATAAAGGTATTATTGCTTGATGTAGATGGAACTTTGTTGAGTTTTGAAACTCATAAGGTGTCGCAATCCTCTATAGA
TGCTCTTAAAAAAGTACATGATAGTGGAATTAAGATTGTGATTGCTACCGGTAGAGCGGCAAGTGATCTTCATGAGATTG
ATGCTGTGCCGTATGATGGAGTTATTGCACTTAATGGAGCAGAGTGTGTATTGCGTGACGGAAGTGTGATAAGAAAAGTA
GCAATACCTGCACAGGATTTTAGAAAATCAATGGAGCTTGCACGGGAATTTGATTTTGCAGTCGCTCTCGAATTAAATGA
AGGTGTATTTGTCAATCGCCTTACCCCGACTGTCGAACAGATTGCCGGAATTGTTGAGCATCCGGTTCCGCCGGTTGTCG
ACATCGAAGAGATGTTTGAAAGAAAAGAATGCTGTCAACTTTGTTTTTATTTTGATGAGGAAGCAGAACAAAAAGTAATG
CCGCTTCTGTCTGGTCTTTCCGCAACACGCTGGCATCCTTTATTTGCTGATGTTAATGTTGCAGGGACAAGTAAGGCAAC
CGGCCTCTCGTTATTTGCCGATTACTACAGGGTTAAAGTTTCTGAAATAATGGCGTGCGGTGATGGCGGTAATGATATCC
CCATGCTGAAGGCCGCCGGAATAGGAGTGGCGATGGGAAATGCGTCCGAAAAAGTTCAGTCAGTTGCCGACTTTGTCACT
GATACGGTGGACAATAGTGGACTTTACAAGGCTTTGAAACATTTCGGGGTAATATAA

Upstream 100 bases:

>100_bases
TTATTGTATATATGATATCTTTTTTAACACGATCTCGTGCTTATCGTTGTAGGCCATGAGAAACTTTTCAGTAACTTTGT
AGCCCAAAAATATAGATAGT

Downstream 100 bases:

>100_bases
ATGTCTTAATGAAGCTTGGCTACAAAGCCAATCACAGGTTTAAAATAAAAAAAAGAGTAACTTATCATAAGTTACTCTTT
TCATTTTGTGGAGCGTATCG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSVIRKV
AIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVM
PLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVT
DTVDNSGLYKALKHFGVI

Sequences:

>Translated_258_residues
MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSVIRKV
AIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVM
PLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVT
DTVDNSGLYKALKHFGVI
>Mature_258_residues
MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSVIRKV
AIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVM
PLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVT
DTVDNSGLYKALKHFGVI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=273, Percent_Identity=29.3040293040293, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27948; Mature: 27948

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDG
CEEEEEEECCCCEEEEEHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCC
VIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQ
EEEECCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCHHHHH
IAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADVNV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEE
AGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVT
CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHH
DTVDNSGLYKALKHFGVI
HCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDG
CEEEEEEECCCCEEEEEHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCC
VIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQ
EEEECCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCHHHHH
IAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADVNV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEE
AGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVT
CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHH
DTVDNSGLYKALKHFGVI
HCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]