| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is tal
Identifier: 29347068
GI number: 29347068
Start: 2049450
End: 2050106
Strand: Reverse
Name: tal
Synonym: BT_1658
Alternate gene names: 29347068
Gene position: 2050106-2049450 (Counterclockwise)
Preceding gene: 29347069
Following gene: 29347067
Centisome position: 32.75
GC content: 44.9
Gene sequence:
>657_bases ATGAAGTTTTTTATTGACACAGCCAATTTGGAGCAGATTCAGGAGGCGTATGACCTCGGAGTACTTGACGGAGTGACTAC CAATCCTTCGCTGATGGCGAAAGAAGGCATTAAAGGTACGGAGAATCAACGTGAACATTACATTAAAATATGTAAGATTG TCAATGCTGACGTAAGTGCGGAAGTAATAGCAACGGATTATGAAGGGATGATCCGCGAAGGGGAAGAGCTTGCCGCACTC AATCCGCATATCGTTGTCAAGGTGCCTTGCATTGCCGATGGTATCAAAGCTATCAAGTACTTTACAGAAAAAGGAATCCG GACCAATTGTACATTGGTATTTTCCGTCGGACAGGCATTGCTGGCTGCAAAAGCCGGAGCGACTTACGTTTCGCCTTTTG TCGGACGTCTGGATGATATTTGCGAAGACGGGGTAGGACTTGTTGGTGATATTGTACGTATGTATCGCACCTATGATTAC AAGACTCAGGTATTGGCGGCTTCTATCCGCAATACGAAGCACATCATCGAGTGTGTGGAGGTGGGAGCAGATGTGGCTAC CTGTCCGTTGAGTGCTATCAAAGGGTTGTTGAATCATCCGCTGACTGATTCGGGATTGAAGAAATTTTTGGAAGATTATA AAAAGGTAAATGGATAA
Upstream 100 bases:
>100_bases GTCTACCTCGATCCGGCAATAACCATTGCCTGATCTAGGAAAGATGAGAAATAATTCTTATCTTTGACTACCAGATAGTT AACCATTAAAAAATAGAATT
Downstream 100 bases:
>100_bases TCGGATTTGAGAAACTAAGTTTTCTTCAAAGTTATATTGATAGAGGCTTCTGACATAAATGTATGTTAGAAGCCTTTTTT AGTTATTTTAATAATGTCAA
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKFFIDTANLEQIQEAYDLGVLDGVTTNPSLMAKEGIKGTENQREHYIKICKIVNADVSAEVIATDYEGMIREGEELAAL NPHIVVKVPCIADGIKAIKYFTEKGIRTNCTLVFSVGQALLAAKAGATYVSPFVGRLDDICEDGVGLVGDIVRMYRTYDY KTQVLAASIRNTKHIIECVEVGADVATCPLSAIKGLLNHPLTDSGLKKFLEDYKKVNG
Sequences:
>Translated_218_residues MKFFIDTANLEQIQEAYDLGVLDGVTTNPSLMAKEGIKGTENQREHYIKICKIVNADVSAEVIATDYEGMIREGEELAAL NPHIVVKVPCIADGIKAIKYFTEKGIRTNCTLVFSVGQALLAAKAGATYVSPFVGRLDDICEDGVGLVGDIVRMYRTYDY KTQVLAASIRNTKHIIECVEVGADVATCPLSAIKGLLNHPLTDSGLKKFLEDYKKVNG >Mature_218_residues MKFFIDTANLEQIQEAYDLGVLDGVTTNPSLMAKEGIKGTENQREHYIKICKIVNADVSAEVIATDYEGMIREGEELAAL NPHIVVKVPCIADGIKAIKYFTEKGIRTNCTLVFSVGQALLAAKAGATYVSPFVGRLDDICEDGVGLVGDIVRMYRTYDY KTQVLAASIRNTKHIIECVEVGADVATCPLSAIKGLLNHPLTDSGLKKFLEDYKKVNG
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily
Homologues:
Organism=Homo sapiens, GI5803187, Length=151, Percent_Identity=35.7615894039735, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI87081788, Length=220, Percent_Identity=31.8181818181818, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1790382, Length=220, Percent_Identity=33.1818181818182, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1786189, Length=172, Percent_Identity=33.1395348837209, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788807, Length=222, Percent_Identity=29.2792792792793, Blast_Score=74, Evalue=9e-15, Organism=Caenorhabditis elegans, GI25153750, Length=142, Percent_Identity=37.3239436619718, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6321480, Length=171, Percent_Identity=30.4093567251462, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI45549185, Length=175, Percent_Identity=32, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAL_BACTN (Q8A767)
Other databases:
- EMBL: AE015928 - RefSeq: NP_810571.1 - ProteinModelPortal: Q8A767 - SMR: Q8A767 - GeneID: 1075635 - GenomeReviews: AE015928_GR - KEGG: bth:BT_1658 - NMPDR: fig|226186.1.peg.1658 - HOGENOM: HBG533000 - OMA: IHKNIVI - PhylomeDB: Q8A767 - ProtClustDB: PRK01362 - BioCyc: BTHE226186:BT_1658-MONOMER - BRENDA: 2.2.1.2 - GO: GO:0005737 - HAMAP: MF_00494 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - TIGRFAMs: TIGR00875
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 23776; Mature: 23776
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 87-87
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFIDTANLEQIQEAYDLGVLDGVTTNPSLMAKEGIKGTENQREHYIKICKIVNADVSA CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC EVIATDYEGMIREGEELAALNPHIVVKVPCIADGIKAIKYFTEKGIRTNCTLVFSVGQAL EEEECCHHHHHHCCCHHEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LAAKAGATYVSPFVGRLDDICEDGVGLVGDIVRMYRTYDYKTQVLAASIRNTKHIIECVE HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VGADVATCPLSAIKGLLNHPLTDSGLKKFLEDYKKVNG HCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFFIDTANLEQIQEAYDLGVLDGVTTNPSLMAKEGIKGTENQREHYIKICKIVNADVSA CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC EVIATDYEGMIREGEELAALNPHIVVKVPCIADGIKAIKYFTEKGIRTNCTLVFSVGQAL EEEECCHHHHHHCCCHHEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LAAKAGATYVSPFVGRLDDICEDGVGLVGDIVRMYRTYDYKTQVLAASIRNTKHIIECVE HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VGADVATCPLSAIKGLLNHPLTDSGLKKFLEDYKKVNG HCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928