| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347040
Identifier: 29347040
GI number: 29347040
Start: 2012204
End: 2013979
Strand: Reverse
Name: 29347040
Synonym: BT_1630
Alternate gene names: NA
Gene position: 2013979-2012204 (Counterclockwise)
Preceding gene: 29347041
Following gene: 29347039
Centisome position: 32.17
GC content: 44.93
Gene sequence:
>1776_bases ATGATGTCGGCATGTTCGGACTTCCTGGACAGAGAGCCTTTGACAACACCCAATAGTGAGACATTCCTTTCCAATGCAAG TGCCGTGAACAACTATATCAACGGTTTGTATATAGCACTTCCTTCTTTCGGGACTTACGATATGGGAGTTCGTGGAGAAG AGAAGAACAGTGATAATATCGTTGCGGAGGTTTATGACAAACGTCTGAACGGAGAATTGCAGGAAAACGGAGGAGGTACT ACGGAATGGCAGAAAGGATATCAGAACCTGCGTAATGTGAATTATTTCTTTGAATACTATAAAGTGCCGGAAACAGAAGA GACGAAAGATGTACTTTCAATGAAAGGTGAGGCTTATTTTTTCCGTGCATACTGGCATTTTTATTTGCTGACCAGATTTG GAAGTATTCCTGTGATGGATAGATTCTGGGACGGCAATGCAACTGTCGGCGGTTTGCAGATTCCTCCGCGTGACCGTTCC GCAGTGGCGCAGTTTATTCTTGACGATCTGAATACAGCTAAGGGATTACTTCACTCGCGTAGCCAGTATAAAGGTTTGAG AGTGTGTAAGGAGGCCGCTATTATTATGGCTATGAGAGTGGCCCTTTATGAAGGTACCTGGGAGAAATATCACAAAGGAA CAGACTTTGCCGCTGCTGAAGATAAATCGGCAGACTTACTGGGACAGGTGCTGACACTGGGCGATGAACTGTTTGGTATG GGACTTGCTTTGAACACAAAAGCTACCGATAAGAATGCAGTGAATATAGAAGATGCTTATGCGCATATATTCAACTCGAA AGACCTGTCGGATATGACAGAGGTTGTATTTTGGAAGAAATATTCGATAGCAGATGGTGTGATTCATAATCTGAGCAGTA ATCTGGGAGCGGGTTATGTAGATAACAGCGGACCGGCAGGTTTATCTCAGTCGTTGGTTGATAATTACTTGAATGCTGAC GGAACACCTATCAATCCTGCTGACGGCATTTTTAAAGATTTCAATTTGACTTTTAAAGGCCGTGACGGACGTTTGCTGGC GACGGTTATGCATTCAAATTGTAAGTTTAAGTCAACCTCACCGGAATCAAAATCGAAAGCGATGCTGGTAGAGGAATATT CGGAAGAGAACAAACAGATAGTTCGTCCCCCTTATCTGACTGAAGGCGGTCCTGCGCGTAATGCTACCGGTTATCACATC CGTATGAGTATCGATACTACATATGTAAGCGGTCAGGGCGAGACGTCTCTTCCGGTGATCCGTTATGCGGAAGCTCTGCT GGCTTATGCGGAAGCTGCGGAAGAATTGGGAAAATGTACTCCTGCTGTTTTGGAAAAAACTTTAAAACCATTGCGAGAGC GCGCTGGGGTGACGTACAAAGACCCGTCTGAAATCGATCCTAATTTCACCGATTTTGGTTATACCATTTCTGCCAATTTG CAGGAAATCCGTAGGGAAAGACGTGCAGAACTAGCTTTGCAAGGTTTTCGTCTTGATGATTTGATGCGTTGGAGAGCTCA TAAACTGATTCAGGGAAAACGTGGAACCGGTGCTTATTTTGGTACAGACGGTGTATTGTACAAAGCATTCGATCCTAAAA ACGCAGCGGACTTGAAAACGATTCTGACTACAGACGGCTGGCTCGACCCACAGAAGGAACTTCTTCCGAGAGGCTATCAG TTTGATGCTAACCGCGATTACCTGTTGCCGGTACCTCCGAGTGAGATATCGTTGAATCATGAGTTGAAACAGAATCCGGG CTGGCAACGGAAATAG
Upstream 100 bases:
>100_bases CCGATGAACCGTAACTTCGTATTCGGACTTGATTTCACCTTTTAATTAGAGAATGACGATGAAAAAAATATATGTATTAT TAGTGGTTGGGGCAAGTTTC
Downstream 100 bases:
>100_bases GAGAATGGAACAAGATTCATTTATGATAATTAGATAGATAAAGATATGAAGAACATATTATATAAAATACTTCCGGTATG TTTGTTGACCATCGGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MMSACSDFLDREPLTTPNSETFLSNASAVNNYINGLYIALPSFGTYDMGVRGEEKNSDNIVAEVYDKRLNGELQENGGGT TEWQKGYQNLRNVNYFFEYYKVPETEETKDVLSMKGEAYFFRAYWHFYLLTRFGSIPVMDRFWDGNATVGGLQIPPRDRS AVAQFILDDLNTAKGLLHSRSQYKGLRVCKEAAIIMAMRVALYEGTWEKYHKGTDFAAAEDKSADLLGQVLTLGDELFGM GLALNTKATDKNAVNIEDAYAHIFNSKDLSDMTEVVFWKKYSIADGVIHNLSSNLGAGYVDNSGPAGLSQSLVDNYLNAD GTPINPADGIFKDFNLTFKGRDGRLLATVMHSNCKFKSTSPESKSKAMLVEEYSEENKQIVRPPYLTEGGPARNATGYHI RMSIDTTYVSGQGETSLPVIRYAEALLAYAEAAEELGKCTPAVLEKTLKPLRERAGVTYKDPSEIDPNFTDFGYTISANL QEIRRERRAELALQGFRLDDLMRWRAHKLIQGKRGTGAYFGTDGVLYKAFDPKNAADLKTILTTDGWLDPQKELLPRGYQ FDANRDYLLPVPPSEISLNHELKQNPGWQRK
Sequences:
>Translated_591_residues MMSACSDFLDREPLTTPNSETFLSNASAVNNYINGLYIALPSFGTYDMGVRGEEKNSDNIVAEVYDKRLNGELQENGGGT TEWQKGYQNLRNVNYFFEYYKVPETEETKDVLSMKGEAYFFRAYWHFYLLTRFGSIPVMDRFWDGNATVGGLQIPPRDRS AVAQFILDDLNTAKGLLHSRSQYKGLRVCKEAAIIMAMRVALYEGTWEKYHKGTDFAAAEDKSADLLGQVLTLGDELFGM GLALNTKATDKNAVNIEDAYAHIFNSKDLSDMTEVVFWKKYSIADGVIHNLSSNLGAGYVDNSGPAGLSQSLVDNYLNAD GTPINPADGIFKDFNLTFKGRDGRLLATVMHSNCKFKSTSPESKSKAMLVEEYSEENKQIVRPPYLTEGGPARNATGYHI RMSIDTTYVSGQGETSLPVIRYAEALLAYAEAAEELGKCTPAVLEKTLKPLRERAGVTYKDPSEIDPNFTDFGYTISANL QEIRRERRAELALQGFRLDDLMRWRAHKLIQGKRGTGAYFGTDGVLYKAFDPKNAADLKTILTTDGWLDPQKELLPRGYQ FDANRDYLLPVPPSEISLNHELKQNPGWQRK >Mature_591_residues MMSACSDFLDREPLTTPNSETFLSNASAVNNYINGLYIALPSFGTYDMGVRGEEKNSDNIVAEVYDKRLNGELQENGGGT TEWQKGYQNLRNVNYFFEYYKVPETEETKDVLSMKGEAYFFRAYWHFYLLTRFGSIPVMDRFWDGNATVGGLQIPPRDRS AVAQFILDDLNTAKGLLHSRSQYKGLRVCKEAAIIMAMRVALYEGTWEKYHKGTDFAAAEDKSADLLGQVLTLGDELFGM GLALNTKATDKNAVNIEDAYAHIFNSKDLSDMTEVVFWKKYSIADGVIHNLSSNLGAGYVDNSGPAGLSQSLVDNYLNAD GTPINPADGIFKDFNLTFKGRDGRLLATVMHSNCKFKSTSPESKSKAMLVEEYSEENKQIVRPPYLTEGGPARNATGYHI RMSIDTTYVSGQGETSLPVIRYAEALLAYAEAAEELGKCTPAVLEKTLKPLRERAGVTYKDPSEIDPNFTDFGYTISANL QEIRRERRAELALQGFRLDDLMRWRAHKLIQGKRGTGAYFGTDGVLYKAFDPKNAADLKTILTTDGWLDPQKELLPRGYQ FDANRDYLLPVPPSEISLNHELKQNPGWQRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66188; Mature: 66188
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSACSDFLDREPLTTPNSETFLSNASAVNNYINGLYIALPSFGTYDMGVRGEEKNSDNI CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCH VAEVYDKRLNGELQENGGGTTEWQKGYQNLRNVNYFFEYYKVPETEETKDVLSMKGEAYF HHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCEEE FRAYWHFYLLTRFGSIPVMDRFWDGNATVGGLQIPPRDRSAVAQFILDDLNTAKGLLHSR HHHHHHHHHHHHCCCCCCCCEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SQYKGLRVCKEAAIIMAMRVALYEGTWEKYHKGTDFAAAEDKSADLLGQVLTLGDELFGM HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GLALNTKATDKNAVNIEDAYAHIFNSKDLSDMTEVVFWKKYSIADGVIHNLSSNLGAGYV CEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DNSGPAGLSQSLVDNYLNADGTPINPADGIFKDFNLTFKGRDGRLLATVMHSNCKFKSTS CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCC PESKSKAMLVEEYSEENKQIVRPPYLTEGGPARNATGYHIRMSIDTTYVSGQGETSLPVI CCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCHHH RYAEALLAYAEAAEELGKCTPAVLEKTLKPLRERAGVTYKDPSEIDPNFTDFGYTISANL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCH QEIRRERRAELALQGFRLDDLMRWRAHKLIQGKRGTGAYFGTDGVLYKAFDPKNAADLKT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCHHHHHH ILTTDGWLDPQKELLPRGYQFDANRDYLLPVPPSEISLNHELKQNPGWQRK HEECCCCCCCHHHHCCCCCEECCCCCEEEECCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MMSACSDFLDREPLTTPNSETFLSNASAVNNYINGLYIALPSFGTYDMGVRGEEKNSDNI CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCH VAEVYDKRLNGELQENGGGTTEWQKGYQNLRNVNYFFEYYKVPETEETKDVLSMKGEAYF HHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCEEE FRAYWHFYLLTRFGSIPVMDRFWDGNATVGGLQIPPRDRSAVAQFILDDLNTAKGLLHSR HHHHHHHHHHHHCCCCCCCCEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SQYKGLRVCKEAAIIMAMRVALYEGTWEKYHKGTDFAAAEDKSADLLGQVLTLGDELFGM HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GLALNTKATDKNAVNIEDAYAHIFNSKDLSDMTEVVFWKKYSIADGVIHNLSSNLGAGYV CEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DNSGPAGLSQSLVDNYLNADGTPINPADGIFKDFNLTFKGRDGRLLATVMHSNCKFKSTS CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCC PESKSKAMLVEEYSEENKQIVRPPYLTEGGPARNATGYHIRMSIDTTYVSGQGETSLPVI CCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCHHH RYAEALLAYAEAAEELGKCTPAVLEKTLKPLRERAGVTYKDPSEIDPNFTDFGYTISANL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCH QEIRRERRAELALQGFRLDDLMRWRAHKLIQGKRGTGAYFGTDGVLYKAFDPKNAADLKT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCHHHHHH ILTTDGWLDPQKELLPRGYQFDANRDYLLPVPPSEISLNHELKQNPGWQRK HEECCCCCCCHHHHCCCCCEECCCCCEEEECCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA