| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yhhQ [C]
Identifier: 29346977
GI number: 29346977
Start: 1931321
End: 1932001
Strand: Reverse
Name: yhhQ [C]
Synonym: BT_1567
Alternate gene names: 29346977
Gene position: 1932001-1931321 (Counterclockwise)
Preceding gene: 29346978
Following gene: 29346976
Centisome position: 30.86
GC content: 43.91
Gene sequence:
>681_bases ATGAAAGAAAAAGTATCAGTACCTTTTATGTTGCTGGGCATTCTCTTCAATGTATGCCTCATTGCAGCCAATCTTCTTGA AACGAAAGTAATTCAGGTCGGCAGCCTGACTGTCACAGCCGGATTATTGGTTTTTCCTATTTCTTATATCATTAATGATT GTATCGCCGAAGTTTGGGGATTCAAGAAAGCACGTCTTATTATCTGGAGTGGTTTTGCTATGAACTTCTTTGTGGTAGGG CTTGGCTTGATAGCTGTTGCGATACCTGCTGCTCCGTTCTGGGAAGGCGAAGAGCATTTCGATTTTGTATTCGGTATGGC TCCCCGCATCGTAGCAGCCAGTTTGATGGCTTTCCTTGTCGGTTCATTCCTGAATGCGTATGTGATGAGTAAGATGAAGA TTGCCAGTCAGGGGCGGAACTTCTCTGCCCGGGCTATTCTCTCAACGATTGTCGGCGAGACTGCCGATTCGTTGATTTTC TTCCCGATAGCTTTCGGAGGCATCATTGCCTGGAAAGAGCTGCTTATCATGATGGGACTTCAGATCGTACTGAAATCTAT GTACGAAGTTATCATCCTTCCGGTGACTATCCGCGTAGTGAAAGTGATTAAGAAGGTAGACGGCAGTGACGTGTACGATA CTAATATTTCTTATAACGTACTGAAAGTCAAAGATATTTAA
Upstream 100 bases:
>100_bases CTTTTTTCTTCTACCTTTGCACCCCGAAACAAGTAAAAAGATGTATGATGCCGTGAATAGCGGTCGTGTATTCTAGAACA CCACGTAAAAAACAGGAGTT
Downstream 100 bases:
>100_bases TGAAACGACTTCTTCCGGCCTGCTTCGAGGGCTGAGAATATAAAGAGAATTTTATGATGAACAGAGAGACTGCATTGGTT GTGTTCAGTGGCGGACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKEKVSVPFMLLGILFNVCLIAANLLETKVIQVGSLTVTAGLLVFPISYIINDCIAEVWGFKKARLIIWSGFAMNFFVVG LGLIAVAIPAAPFWEGEEHFDFVFGMAPRIVAASLMAFLVGSFLNAYVMSKMKIASQGRNFSARAILSTIVGETADSLIF FPIAFGGIIAWKELLIMMGLQIVLKSMYEVIILPVTIRVVKVIKKVDGSDVYDTNISYNVLKVKDI
Sequences:
>Translated_226_residues MKEKVSVPFMLLGILFNVCLIAANLLETKVIQVGSLTVTAGLLVFPISYIINDCIAEVWGFKKARLIIWSGFAMNFFVVG LGLIAVAIPAAPFWEGEEHFDFVFGMAPRIVAASLMAFLVGSFLNAYVMSKMKIASQGRNFSARAILSTIVGETADSLIF FPIAFGGIIAWKELLIMMGLQIVLKSMYEVIILPVTIRVVKVIKKVDGSDVYDTNISYNVLKVKDI >Mature_226_residues MKEKVSVPFMLLGILFNVCLIAANLLETKVIQVGSLTVTAGLLVFPISYIINDCIAEVWGFKKARLIIWSGFAMNFFVVG LGLIAVAIPAAPFWEGEEHFDFVFGMAPRIVAASLMAFLVGSFLNAYVMSKMKIASQGRNFSARAILSTIVGETADSLIF FPIAFGGIIAWKELLIMMGLQIVLKSMYEVIILPVTIRVVKVIKKVDGSDVYDTNISYNVLKVKDI
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24824; Mature: 24824
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKVSVPFMLLGILFNVCLIAANLLETKVIQVGSLTVTAGLLVFPISYIINDCIAEVWG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FKKARLIIWSGFAMNFFVVGLGLIAVAIPAAPFWEGEEHFDFVFGMAPRIVAASLMAFLV CCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GSFLNAYVMSKMKIASQGRNFSARAILSTIVGETADSLIFFPIAFGGIIAWKELLIMMGL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QIVLKSMYEVIILPVTIRVVKVIKKVDGSDVYDTNISYNVLKVKDI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECC >Mature Secondary Structure MKEKVSVPFMLLGILFNVCLIAANLLETKVIQVGSLTVTAGLLVFPISYIINDCIAEVWG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FKKARLIIWSGFAMNFFVVGLGLIAVAIPAAPFWEGEEHFDFVFGMAPRIVAASLMAFLV CCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GSFLNAYVMSKMKIASQGRNFSARAILSTIVGETADSLIFFPIAFGGIIAWKELLIMMGL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QIVLKSMYEVIILPVTIRVVKVIKKVDGSDVYDTNISYNVLKVKDI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA