| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is pgsA1 [H]
Identifier: 29346933
GI number: 29346933
Start: 1878191
End: 1878859
Strand: Reverse
Name: pgsA1 [H]
Synonym: BT_1523
Alternate gene names: 29346933
Gene position: 1878859-1878191 (Counterclockwise)
Preceding gene: 29346934
Following gene: 29346932
Centisome position: 30.01
GC content: 45.14
Gene sequence:
>669_bases ATGAATTACAGAGATTACTTACAGCAACTGATTTATAAGATTATCAATCCTTTGATACATGGAATGATTAAAATAGGCAT CACCCCTAATTTTATCACTACTACCGGATTTATTCTGAATGTGGTAGCGGCAGGTATGTTTGTCTATGCCGGTATCTGTG GCGGACAGAATGATTTGTCCATTCTTGGATGGGCAGGAGGTGTGATCCTTTTTGCCGGATTGTTCGATATGATGGACGGG CGTGTGGCACGTCTGGGAAACATGAGTTCCAAATTCGGTGCCCTCTACGATTCTGTGCTTGATCGTTACAGTGAGTTGAT GACTTTCTTCGGTATCTGTTACTATTTGTCAGTCAAAGACTATTTCATTTACGCTATCATTGCGTTTGTTGCCCTGATCG GTTCGCTGATGGTGAGCTATGTGCGTGCCCGCGCCGAAGGTCTGGGCATTGAGTGCAAGGTTGGATTTATGCAACGCCCG GAGCGTGTGGTTCTGACAAGTCTCGGAGCCTTGTTCTGCGGTGTATTCAAGGATATTACCGCTTTTGATCCGATGCTGAT ATTGATGGTGCCTTTGACAATCGTCGCTGTGTTCGCCAATATCACAGCTTTCGCACGCGTGAGACATTGCTATAAGGTGA TGACAGCGAACGAAAAGAAGAATGACTAA
Upstream 100 bases:
>100_bases TATGCAGCGTTTCTTTGTTTACCGGAATATAGATATAAGAAGCTTGTTTAAAAGAAATTGAAAGAAAACAGAAGATTTAG ATAAAAACAGATTTAGGTAT
Downstream 100 bases:
>100_bases TTAAAATAACATCCTTAATGATAAAAACAATTCAAATGCCGTCGAAGAAAGAAACCCTGACCGTTATTGTCATCATGGCT CTTTTTCTTCTGCTGACAGC
Product: CDP-diacylglycerol-inositol 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylinositol synthase; PI synthase [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNYRDYLQQLIYKIINPLIHGMIKIGITPNFITTTGFILNVVAAGMFVYAGICGGQNDLSILGWAGGVILFAGLFDMMDG RVARLGNMSSKFGALYDSVLDRYSELMTFFGICYYLSVKDYFIYAIIAFVALIGSLMVSYVRARAEGLGIECKVGFMQRP ERVVLTSLGALFCGVFKDITAFDPMLILMVPLTIVAVFANITAFARVRHCYKVMTANEKKND
Sequences:
>Translated_222_residues MNYRDYLQQLIYKIINPLIHGMIKIGITPNFITTTGFILNVVAAGMFVYAGICGGQNDLSILGWAGGVILFAGLFDMMDG RVARLGNMSSKFGALYDSVLDRYSELMTFFGICYYLSVKDYFIYAIIAFVALIGSLMVSYVRARAEGLGIECKVGFMQRP ERVVLTSLGALFCGVFKDITAFDPMLILMVPLTIVAVFANITAFARVRHCYKVMTANEKKND >Mature_222_residues MNYRDYLQQLIYKIINPLIHGMIKIGITPNFITTTGFILNVVAAGMFVYAGICGGQNDLSILGWAGGVILFAGLFDMMDG RVARLGNMSSKFGALYDSVLDRYSELMTFFGICYYLSVKDYFIYAIIAFVALIGSLMVSYVRARAEGLGIECKVGFMQRP ERVVLTSLGALFCGVFKDITAFDPMLILMVPLTIVAVFANITAFARVRHCYKVMTANEKKND
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.11 [H]
Molecular weight: Translated: 24625; Mature: 24625
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRDYLQQLIYKIINPLIHGMIKIGITPNFITTTGFILNVVAAGMFVYAGICGGQNDLS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ILGWAGGVILFAGLFDMMDGRVARLGNMSSKFGALYDSVLDRYSELMTFFGICYYLSVKD HHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFIYAIIAFVALIGSLMVSYVRARAEGLGIECKVGFMQRPERVVLTSLGALFCGVFKDIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHH AFDPMLILMVPLTIVAVFANITAFARVRHCYKVMTANEKKND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNYRDYLQQLIYKIINPLIHGMIKIGITPNFITTTGFILNVVAAGMFVYAGICGGQNDLS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ILGWAGGVILFAGLFDMMDGRVARLGNMSSKFGALYDSVLDRYSELMTFFGICYYLSVKD HHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFIYAIIAFVALIGSLMVSYVRARAEGLGIECKVGFMQRPERVVLTSLGALFCGVFKDIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHH AFDPMLILMVPLTIVAVFANITAFARVRHCYKVMTANEKKND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036; 10889206 [H]