Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346916

Identifier: 29346916

GI number: 29346916

Start: 1857727

End: 1858218

Strand: Reverse

Name: 29346916

Synonym: BT_1506

Alternate gene names: NA

Gene position: 1858218-1857727 (Counterclockwise)

Preceding gene: 29346917

Following gene: 29346915

Centisome position: 29.68

GC content: 37.8

Gene sequence:

>492_bases
ATGAAAAAGAAAGATCTGTTATATATATGTGTGTTGGTTGCCGTTTCTTGTTTCTTGTTCTCATGCGGAGAAAAAAAGAA
GCAGCTCACTCCCAAAGAAGAATTCTTAATGGGGTTGACAGCTGAAGATACGGTGCAAGTACTTACCATATCACGCAGTT
GCATGGATACATTGAAAGCCGGAAATATAGATGAAGCGCTGAAGATGCTTTTTATCTTGCGCGATGGAAAAGCGATACCT
CTTCCCGCTGAGAAGGAACAACAACTGAGGAAAAAATTCAAGTATTTTCCTGTTGTAGATTATAAATTGGATTATTATTC
TTTTTCAAGTACGGATAATAACGATGTGAAGTTTCAGATAGAGTTTTTCAAGCACACTAGTTCGGATGATCATACGCCAA
ATACAATTGGATTTATGTTTAATCCGGTGAAAATAGACGGAGTTTGGTATCTTGCCGTTAAAGAGGCTACCAAGGAAGCT
ACTGATAAGTAG

Upstream 100 bases:

>100_bases
CAATGGGTAACTAATAGTAAAGGTTTCATTACTAAACACTGATAAGGAGGGTGCGCCGATCATTGGTGCACCCTCCTTCA
CAATAAGAATTGAAGGCGGA

Downstream 100 bases:

>100_bases
TAGATGAATGGTGACGAGTACTGTTGTCATTGGTTTTTAGACTTTTAAACAGGTTTTGATTATGAATATAAAAAAAATAT
TAGTTGCTGTATATGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKKKDLLYICVLVAVSCFLFSCGEKKKQLTPKEEFLMGLTAEDTVQVLTISRSCMDTLKAGNIDEALKMLFILRDGKAIP
LPAEKEQQLRKKFKYFPVVDYKLDYYSFSSTDNNDVKFQIEFFKHTSSDDHTPNTIGFMFNPVKIDGVWYLAVKEATKEA
TDK

Sequences:

>Translated_163_residues
MKKKDLLYICVLVAVSCFLFSCGEKKKQLTPKEEFLMGLTAEDTVQVLTISRSCMDTLKAGNIDEALKMLFILRDGKAIP
LPAEKEQQLRKKFKYFPVVDYKLDYYSFSSTDNNDVKFQIEFFKHTSSDDHTPNTIGFMFNPVKIDGVWYLAVKEATKEA
TDK
>Mature_163_residues
MKKKDLLYICVLVAVSCFLFSCGEKKKQLTPKEEFLMGLTAEDTVQVLTISRSCMDTLKAGNIDEALKMLFILRDGKAIP
LPAEKEQQLRKKFKYFPVVDYKLDYYSFSSTDNNDVKFQIEFFKHTSSDDHTPNTIGFMFNPVKIDGVWYLAVKEATKEA
TDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18718; Mature: 18718

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKDLLYICVLVAVSCFLFSCGEKKKQLTPKEEFLMGLTAEDTVQVLTISRSCMDTLKA
CCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHCCCCCCCCEEEEEECHHHHHHHCC
GNIDEALKMLFILRDGKAIPLPAEKEQQLRKKFKYFPVVDYKLDYYSFSSTDNNDVKFQI
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEE
EFFKHTSSDDHTPNTIGFMFNPVKIDGVWYLAVKEATKEATDK
EEEECCCCCCCCCCEEEEEECCEEECCEEEEEEEHHHHHCCCC
>Mature Secondary Structure
MKKKDLLYICVLVAVSCFLFSCGEKKKQLTPKEEFLMGLTAEDTVQVLTISRSCMDTLKA
CCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHCCCCCCCCEEEEEECHHHHHHHCC
GNIDEALKMLFILRDGKAIPLPAEKEQQLRKKFKYFPVVDYKLDYYSFSSTDNNDVKFQI
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEE
EFFKHTSSDDHTPNTIGFMFNPVKIDGVWYLAVKEATKEATDK
EEEECCCCCCCCCCEEEEEECCEEECCEEEEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA