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The map label for this gene is 29346878

Identifier: 29346878

GI number: 29346878

Start: 1808516

End: 1809757

Strand: Reverse

Name: 29346878

Synonym: BT_1468

Alternate gene names: NA

Gene position: 1809757-1808516 (Counterclockwise)

Preceding gene: 29346883

Following gene: 29346877

Centisome position: 28.91

GC content: 45.25

Gene sequence:

>1242_bases
ATGACTTTGGATGAGTGCATTCGTCTGGCATGGAAGCAGAATCCTTCTGTGCGGAACAGTGTGATAGATATAAAGGAGGC
ACGGGCAGATTATATGGCTGCTGTCGGTGCTTTTCTTCCCCGTGCAGCGGTTAATGCAGAAACAGGGAAACGCTTCGGGC
GTTCTATCGATCCGGATACGAACGGATATACCAACGAAACTTTTGAAGAAGGGACTGTGGGGCTTGATATGACTCTTTCT
CTTTTTGAAGGCTTTTCACGCATTCATCAGGTACGCTTCCGGAAGATGAATAAGGAACGTAGCGAATGGGCATTGAAAAA
TAGGCAGAATGAACTGGCATATCAAGTGACGGATGCTTATTATAAACTGATTCTGGAGAGAAAACTGCTGAATCTTGCTT
TAGAACAAAGCCGGTTGAGTGAGCGGTATCTGAAACAAACCGAAGCCTTTGTTGAGTTGGGATTGAAATCCGCTTCCGAT
TTGCAGGAAGTCAAGGCCCGCAGAGAAGGGGATATCTATCGTTATAAATCTCGTGAGAATACTTGCCGGTTGGCCTTATT
GCATCTGGAACAGCTAATGAATTTCCAACCCGGTGATACACTCGTTATTCAGGATACTATTGTGGAAGCGAATCAGTTGC
CCTTGCTTTCTGTTCCGTCTACGGAAACACTTTATGCCCAATCACTGGAAATACTTCCCGTCATGCGTATGATTGATTTG
AAACGAAAGGCTGCCCGTAAAGAGTATGCGATGGCTGGCGGAACTTTTTCTCCTTCTGTCTATGCCCGCTTTACGGTTGG
TTCCAATTTTTACAATACAGTTTTTTCTGCCAGACAGTTGCGGGACAATATAGGAAAATATGTCGGCATCGGTATTTCGT
TTCCTTTGCTGAGCGGATTGGAACGTCTGACTCATCAACGGAAGCAGAAACTAAACCTGTATCGCTTGAAGAATGAAGAA
GAACTGGAAAAGCAACAGCTATATACCGATATAGAGCAAACACTTCTTTCCCTACATGCCGGATTTAGTGAACATCAACA
GGCATTGCAACAGCTTGAAGCAGAAGCTCTCGTACTGAAAGAGTCTGAACGTAAATGGGAGGAAGGGCTCATTTCCGTCT
TTCAGCTGATGGAAGCCCGTAACCGTTTTATCTCCGCCAAGGCAGAACTGGTTCGTGTACGCCTGCAAGTGGAAATGATG
AGGAAACTGGAGAAATACTATCGGGAGGGGACTTTCCTGTAA

Upstream 100 bases:

>100_bases
TAATCATCGTAACACACAATCGCATATATTATAAAGAATGAAAAACTTTTTCTTTTTGTCCTTATTCTTATTGCCGCATT
TTGTGCAGGCCCAGTCCGGC

Downstream 100 bases:

>100_bases
AACGGAGTCTGTGCCATCGGAACAATCATTTAATAACAACCCTATTTTGAATATACCTTTATGGATACACCTGTTGAACG
CAAACCCGGCATAAATCGCA

Product: putative outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Transport/Efflux Protein; HlyD Family Secretion Protein; Outer Membrane Protein

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTLDECIRLAWKQNPSVRNSVIDIKEARADYMAAVGAFLPRAAVNAETGKRFGRSIDPDTNGYTNETFEEGTVGLDMTLS
LFEGFSRIHQVRFRKMNKERSEWALKNRQNELAYQVTDAYYKLILERKLLNLALEQSRLSERYLKQTEAFVELGLKSASD
LQEVKARREGDIYRYKSRENTCRLALLHLEQLMNFQPGDTLVIQDTIVEANQLPLLSVPSTETLYAQSLEILPVMRMIDL
KRKAARKEYAMAGGTFSPSVYARFTVGSNFYNTVFSARQLRDNIGKYVGIGISFPLLSGLERLTHQRKQKLNLYRLKNEE
ELEKQQLYTDIEQTLLSLHAGFSEHQQALQQLEAEALVLKESERKWEEGLISVFQLMEARNRFISAKAELVRVRLQVEMM
RKLEKYYREGTFL

Sequences:

>Translated_413_residues
MTLDECIRLAWKQNPSVRNSVIDIKEARADYMAAVGAFLPRAAVNAETGKRFGRSIDPDTNGYTNETFEEGTVGLDMTLS
LFEGFSRIHQVRFRKMNKERSEWALKNRQNELAYQVTDAYYKLILERKLLNLALEQSRLSERYLKQTEAFVELGLKSASD
LQEVKARREGDIYRYKSRENTCRLALLHLEQLMNFQPGDTLVIQDTIVEANQLPLLSVPSTETLYAQSLEILPVMRMIDL
KRKAARKEYAMAGGTFSPSVYARFTVGSNFYNTVFSARQLRDNIGKYVGIGISFPLLSGLERLTHQRKQKLNLYRLKNEE
ELEKQQLYTDIEQTLLSLHAGFSEHQQALQQLEAEALVLKESERKWEEGLISVFQLMEARNRFISAKAELVRVRLQVEMM
RKLEKYYREGTFL
>Mature_412_residues
TLDECIRLAWKQNPSVRNSVIDIKEARADYMAAVGAFLPRAAVNAETGKRFGRSIDPDTNGYTNETFEEGTVGLDMTLSL
FEGFSRIHQVRFRKMNKERSEWALKNRQNELAYQVTDAYYKLILERKLLNLALEQSRLSERYLKQTEAFVELGLKSASDL
QEVKARREGDIYRYKSRENTCRLALLHLEQLMNFQPGDTLVIQDTIVEANQLPLLSVPSTETLYAQSLEILPVMRMIDLK
RKAARKEYAMAGGTFSPSVYARFTVGSNFYNTVFSARQLRDNIGKYVGIGISFPLLSGLERLTHQRKQKLNLYRLKNEEE
LEKQQLYTDIEQTLLSLHAGFSEHQQALQQLEAEALVLKESERKWEEGLISVFQLMEARNRFISAKAELVRVRLQVEMMR
KLEKYYREGTFL

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47812; Mature: 47680

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDECIRLAWKQNPSVRNSVIDIKEARADYMAAVGAFLPRAAVNAETGKRFGRSIDPDT
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
NGYTNETFEEGTVGLDMTLSLFEGFSRIHQVRFRKMNKERSEWALKNRQNELAYQVTDAY
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH
YKLILERKLLNLALEQSRLSERYLKQTEAFVELGLKSASDLQEVKARREGDIYRYKSREN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCC
TCRLALLHLEQLMNFQPGDTLVIQDTIVEANQLPLLSVPSTETLYAQSLEILPVMRMIDL
HHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
KRKAARKEYAMAGGTFSPSVYARFTVGSNFYNTVFSARQLRDNIGKYVGIGISFPLLSGL
HHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH
ERLTHQRKQKLNLYRLKNEEELEKQQLYTDIEQTLLSLHAGFSEHQQALQQLEAEALVLK
HHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ESERKWEEGLISVFQLMEARNRFISAKAELVRVRLQVEMMRKLEKYYREGTFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLDECIRLAWKQNPSVRNSVIDIKEARADYMAAVGAFLPRAAVNAETGKRFGRSIDPDT
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
NGYTNETFEEGTVGLDMTLSLFEGFSRIHQVRFRKMNKERSEWALKNRQNELAYQVTDAY
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH
YKLILERKLLNLALEQSRLSERYLKQTEAFVELGLKSASDLQEVKARREGDIYRYKSREN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCC
TCRLALLHLEQLMNFQPGDTLVIQDTIVEANQLPLLSVPSTETLYAQSLEILPVMRMIDL
HHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
KRKAARKEYAMAGGTFSPSVYARFTVGSNFYNTVFSARQLRDNIGKYVGIGISFPLLSGL
HHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH
ERLTHQRKQKLNLYRLKNEEELEKQQLYTDIEQTLLSLHAGFSEHQQALQQLEAEALVLK
HHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ESERKWEEGLISVFQLMEARNRFISAKAELVRVRLQVEMMRKLEKYYREGTFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA