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The map label for this gene is ccsA [H]

Identifier: 29346825

GI number: 29346825

Start: 1748290

End: 1749081

Strand: Reverse

Name: ccsA [H]

Synonym: BT_1415

Alternate gene names: 29346825

Gene position: 1749081-1748290 (Counterclockwise)

Preceding gene: 29346826

Following gene: 29346824

Centisome position: 27.94

GC content: 45.08

Gene sequence:

>792_bases
ATGAGTTGGGAACATTTTATATGGTTTGCGATAGCCGCATTGATTTGCTGGGGCTTGGGCGCGTTTGCTGCCTGGGAAGG
AAAGAAGCCGGTATGGGCTTATGGGTTTACCTTGTTGGGGCTGGCTATCTTTTTCAGTTTTATCCTCGGTATGTGGATTT
CTCTGGAACGTCCTCCGATGCGGACGATGGGAGAGACACGTCTGTGGTATTCTTTCTTCCTTCCATTGGCTGGTTTGATA
ACGTACGTGCGTTGGAAATATAAATGGATTCTTAGTTTCAGTTGCATTCTCTCACTGGTATTTATCTGTATCAATATCTT
TAAACCGGAGATTCACAATAAAACGCTGATGCCTGCTTTGCAAAGTCCGTGGTTTGCCCCTCATGTCATAGTGTATATGT
TTGCTTATGCGATGTTGGGAGCTGCGGTGGTCATGGCTGTCTATCTGCTTTGGTTCAAAAAGAAGGATATTGAACGGAAA
GAGATGGACTTATGCGATAACCTGACTTATGTGGGCTTGGCATTTATGACATTGGGAATGCTGACGGGAGCTATCTGGGC
GAAAGAAGCGTGGGGGCACTACTGGGCTTGGGACCCGAAAGAGACATGGGCGGCAGCTACTTGGTTCTCCTATCTGGTAT
ATATCCATTTCAGGCTGGGCAGACCGTTGAAGAGTCGTCCGGCATTAGTCATTCTGTTAGTATCATTTGTCTTATTACAA
ATGTGTTGGTATGGAATCAATTACCTTCCATCGGCACAAGGAGTTAGTGTACATACTTATAACTTAAATTGA

Upstream 100 bases:

>100_bases
ACCCGTGGTTGCCTGTAGTATATGCAGGGATCATCATGATGATGCTCGGAGCAATTTGTCTGTTTGTCAATGCACAAAAG
AGGAAAGAGGAGGATACGGA

Downstream 100 bases:

>100_bases
AATATCAATGAAAACATTTTATTGGTCATTCGTTCTTATGCTATTGCCAAGCATGGCATACACACAAACTACGGAGAAGG
AAAATGAATTTTCGATGTCT

Product: cytochrome c biogenesis protein CcsA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSWEHFIWFAIAALICWGLGAFAAWEGKKPVWAYGFTLLGLAIFFSFILGMWISLERPPMRTMGETRLWYSFFLPLAGLI
TYVRWKYKWILSFSCILSLVFICINIFKPEIHNKTLMPALQSPWFAPHVIVYMFAYAMLGAAVVMAVYLLWFKKKDIERK
EMDLCDNLTYVGLAFMTLGMLTGAIWAKEAWGHYWAWDPKETWAAATWFSYLVYIHFRLGRPLKSRPALVILLVSFVLLQ
MCWYGINYLPSAQGVSVHTYNLN

Sequences:

>Translated_263_residues
MSWEHFIWFAIAALICWGLGAFAAWEGKKPVWAYGFTLLGLAIFFSFILGMWISLERPPMRTMGETRLWYSFFLPLAGLI
TYVRWKYKWILSFSCILSLVFICINIFKPEIHNKTLMPALQSPWFAPHVIVYMFAYAMLGAAVVMAVYLLWFKKKDIERK
EMDLCDNLTYVGLAFMTLGMLTGAIWAKEAWGHYWAWDPKETWAAATWFSYLVYIHFRLGRPLKSRPALVILLVSFVLLQ
MCWYGINYLPSAQGVSVHTYNLN
>Mature_262_residues
SWEHFIWFAIAALICWGLGAFAAWEGKKPVWAYGFTLLGLAIFFSFILGMWISLERPPMRTMGETRLWYSFFLPLAGLIT
YVRWKYKWILSFSCILSLVFICINIFKPEIHNKTLMPALQSPWFAPHVIVYMFAYAMLGAAVVMAVYLLWFKKKDIERKE
MDLCDNLTYVGLAFMTLGMLTGAIWAKEAWGHYWAWDPKETWAAATWFSYLVYIHFRLGRPLKSRPALVILLVSFVLLQM
CWYGINYLPSAQGVSVHTYNLN

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 30626; Mature: 30495

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWEHFIWFAIAALICWGLGAFAAWEGKKPVWAYGFTLLGLAIFFSFILGMWISLERPPM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RTMGETRLWYSFFLPLAGLITYVRWKYKWILSFSCILSLVFICINIFKPEIHNKTLMPAL
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QSPWFAPHVIVYMFAYAMLGAAVVMAVYLLWFKKKDIERKEMDLCDNLTYVGLAFMTLGM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH
LTGAIWAKEAWGHYWAWDPKETWAAATWFSYLVYIHFRLGRPLKSRPALVILLVSFVLLQ
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
MCWYGINYLPSAQGVSVHTYNLN
HHHHCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SWEHFIWFAIAALICWGLGAFAAWEGKKPVWAYGFTLLGLAIFFSFILGMWISLERPPM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RTMGETRLWYSFFLPLAGLITYVRWKYKWILSFSCILSLVFICINIFKPEIHNKTLMPAL
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QSPWFAPHVIVYMFAYAMLGAAVVMAVYLLWFKKKDIERKEMDLCDNLTYVGLAFMTLGM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH
LTGAIWAKEAWGHYWAWDPKETWAAATWFSYLVYIHFRLGRPLKSRPALVILLVSFVLLQ
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
MCWYGINYLPSAQGVSVHTYNLN
HHHHCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]