Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346799

Identifier: 29346799

GI number: 29346799

Start: 1716171

End: 1716734

Strand: Reverse

Name: 29346799

Synonym: BT_1389

Alternate gene names: NA

Gene position: 1716734-1716171 (Counterclockwise)

Preceding gene: 29346800

Following gene: 29346798

Centisome position: 27.42

GC content: 41.13

Gene sequence:

>564_bases
ATGGATATAAATGATATCATAGACTCTATTTACAAGTTGCCGGATGCCTCAAAGGAGGCTTTACTGAGTGATGCTCCCGA
AGTAGCCTATCCTAAAGGCTTCCATCTGTTCCGGGCAAATCATAAAAACTCTAAGTTCTATCTGATGAAGAAAGGGATGC
TGCATGCCTATACCTATCAGTCGGATAAGAAGGTTACCTTCTGGTTCGGGAAAGAAGGGGATGCAATCTTCCCTCTGCAA
ACTCTTCATGATAATCGGGCAGGATATGAGAATATTGAACTTTTGGAAGACAGTGTCCTGTATGAACTCAGTGTCGATAA
ATTGCACAATCTCTATCTGGAAGATATACATATAGCCAACTGGGGACGGAAGTTTTCCGAGAGAGAATGCATCAAATCGG
AAAAGTTGTTTATATCAAGGCAATTCAAAACTTCATTGGAGAGGTATCAGGAACTGATATCCGAATATCCCGATATACTT
CAACGTGTGCCATTGGGTATTATAGCTTCCTATTTAGGCATCTCACAGGTCAATCTAAGCAGAATCCGTGCGAAGATAAG
ATGA

Upstream 100 bases:

>100_bases
GACTGGGCCGGTTGTACTTCTTCTTTATTCGTCCTTTTCATAAAGTCATCATCCGTTCTATGCTGAAAAGGGTAGCAAAA
CGATTGAAATAAAACAGCTT

Downstream 100 bases:

>100_bases
TTTTTTAAACTTTGTAAAATCCCTTTTTTACAAATGTAAAATGAAGGGCGCCGGAAATTCATGACCTTTGCAATCAAAAA
AAAGAAGTGTTATGAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDINDIIDSIYKLPDASKEALLSDAPEVAYPKGFHLFRANHKNSKFYLMKKGMLHAYTYQSDKKVTFWFGKEGDAIFPLQ
TLHDNRAGYENIELLEDSVLYELSVDKLHNLYLEDIHIANWGRKFSERECIKSEKLFISRQFKTSLERYQELISEYPDIL
QRVPLGIIASYLGISQVNLSRIRAKIR

Sequences:

>Translated_187_residues
MDINDIIDSIYKLPDASKEALLSDAPEVAYPKGFHLFRANHKNSKFYLMKKGMLHAYTYQSDKKVTFWFGKEGDAIFPLQ
TLHDNRAGYENIELLEDSVLYELSVDKLHNLYLEDIHIANWGRKFSERECIKSEKLFISRQFKTSLERYQELISEYPDIL
QRVPLGIIASYLGISQVNLSRIRAKIR
>Mature_187_residues
MDINDIIDSIYKLPDASKEALLSDAPEVAYPKGFHLFRANHKNSKFYLMKKGMLHAYTYQSDKKVTFWFGKEGDAIFPLQ
TLHDNRAGYENIELLEDSVLYELSVDKLHNLYLEDIHIANWGRKFSERECIKSEKLFISRQFKTSLERYQELISEYPDIL
QRVPLGIIASYLGISQVNLSRIRAKIR

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21852; Mature: 21852

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINDIIDSIYKLPDASKEALLSDAPEVAYPKGFHLFRANHKNSKFYLMKKGMLHAYTYQ
CCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
SDKKVTFWFGKEGDAIFPLQTLHDNRAGYENIELLEDSVLYELSVDKLHNLYLEDIHIAN
CCCEEEEEECCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHEECHHHHHHHHHHHEEECH
WGRKFSERECIKSEKLFISRQFKTSLERYQELISEYPDILQRVPLGIIASYLGISQVNLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RIRAKIR
HHHHHCC
>Mature Secondary Structure
MDINDIIDSIYKLPDASKEALLSDAPEVAYPKGFHLFRANHKNSKFYLMKKGMLHAYTYQ
CCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
SDKKVTFWFGKEGDAIFPLQTLHDNRAGYENIELLEDSVLYELSVDKLHNLYLEDIHIAN
CCCEEEEEECCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHEECHHHHHHHHHHHEEECH
WGRKFSERECIKSEKLFISRQFKTSLERYQELISEYPDILQRVPLGIIASYLGISQVNLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RIRAKIR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA