| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346765
Identifier: 29346765
GI number: 29346765
Start: 1680631
End: 1681770
Strand: Reverse
Name: 29346765
Synonym: BT_1355
Alternate gene names: NA
Gene position: 1681770-1680631 (Counterclockwise)
Preceding gene: 29346766
Following gene: 29346764
Centisome position: 26.86
GC content: 35.35
Gene sequence:
>1140_bases ATGTCAGAACAACGACAGGATAAAAACTTGCTCTCTGAACCACACAAGACAGAAAGTGATGAGATAGAAATTGATTTGGT TGATATCTTTCGCAAGATTATTGCTATTCGTAGAAAATTATACAAAGCCATTGGAGTTGGTTTTATTATTGGAATGATTG TAGCAGTAAGTATTCCTAAACAGTATACAGTAAAGGTTACCCTTTCTCCAGAAATGGGGAGTTCCAAGGGTGGTAATGGT TTAGCGGGACTTGCAGCATCTTTTTTGGGAAGTTCAGCTACTACGGGTGAGGTCTCTGATGCTTTGAATGCTTCCCTTTC CTCTGACATTGTTTCGTCCACTCCTTTTCTTTTGGAATTATTAGATATGAAAGTTGCTTTATCGGATGAAAGAACAGATA TAACTTTAATGGATTATTTGGATAGGCAATCTTCTCCTTGGTGGAATTATGTTATAGGTTTGCCTGGAATGGTAATTGGT GGTGTGAAGTCTTTGTTCAATAGTGATGATAATGATAATTCACTTAATAAAGTGAAATCGGGTACTATTGAACTAACAAA AGAAGAAGGTATAAAAGTCAATGTTTTGAAAAAGAATATATCTGCTTCTGTTGATAAAAAAACGGCTATAACAAGTGTCT CTGTTACTTTGCAAGATCCTAAAGTAACTGCGGTTGTTGCAGATTCTGTAGTTCATAAATTGCAAGAATGTATCGTTGGT TATCGCATTTCTAAAGCGGAAGAAGATTGTATTTATTTGGAAAAACTATATAAAGAGCGCCAACAAGAGTATTATGTTGC TCAAAAGAAATATGCAGATTATGTGGATACACATGACAACCTCATACTTCAAAGCGTTCGTGCGGAACAGGAGCGATTGC AAAATGACATGAATTTAGCTTATCAGGTTTATAGTCAGGTTGCCAATCAGTTACAAGTAGCCAGAGCAAAAGTTCAGGAG GAGAAGCCTGTTTTTGCAGTGATAGAACCTGCGGTTGTACCTCAACATGCTTCTAGTATCGGATTAAGAATTTATGTTTT GTTATTTATATTTTTGTCTGTATGTTATACTATTAGCTGGAATTTATTAGGCAAAAAAATTAGGTATATTTTGAAGGGTA GTAAGGAGAATCAACAATAA
Upstream 100 bases:
>100_bases ACATAGCTAATATTTTAGGTTATGCTACTTCCTTCAGTTCTTTGGGAATGATGATTGCTTCTATTGCTAATCTTATAAAG AAATAATAGAATTTACTTTT
Downstream 100 bases:
>100_bases TCTTTTGATATTGATGAACGGAAATACTCGAACGAAGAGAAGTTTAAAAAATATGCAAACAGCATTGCTGTTTTATATTA TTAATTTAGTATTAGCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MSEQRQDKNLLSEPHKTESDEIEIDLVDIFRKIIAIRRKLYKAIGVGFIIGMIVAVSIPKQYTVKVTLSPEMGSSKGGNG LAGLAASFLGSSATTGEVSDALNASLSSDIVSSTPFLLELLDMKVALSDERTDITLMDYLDRQSSPWWNYVIGLPGMVIG GVKSLFNSDDNDNSLNKVKSGTIELTKEEGIKVNVLKKNISASVDKKTAITSVSVTLQDPKVTAVVADSVVHKLQECIVG YRISKAEEDCIYLEKLYKERQQEYYVAQKKYADYVDTHDNLILQSVRAEQERLQNDMNLAYQVYSQVANQLQVARAKVQE EKPVFAVIEPAVVPQHASSIGLRIYVLLFIFLSVCYTISWNLLGKKIRYILKGSKENQQ
Sequences:
>Translated_379_residues MSEQRQDKNLLSEPHKTESDEIEIDLVDIFRKIIAIRRKLYKAIGVGFIIGMIVAVSIPKQYTVKVTLSPEMGSSKGGNG LAGLAASFLGSSATTGEVSDALNASLSSDIVSSTPFLLELLDMKVALSDERTDITLMDYLDRQSSPWWNYVIGLPGMVIG GVKSLFNSDDNDNSLNKVKSGTIELTKEEGIKVNVLKKNISASVDKKTAITSVSVTLQDPKVTAVVADSVVHKLQECIVG YRISKAEEDCIYLEKLYKERQQEYYVAQKKYADYVDTHDNLILQSVRAEQERLQNDMNLAYQVYSQVANQLQVARAKVQE EKPVFAVIEPAVVPQHASSIGLRIYVLLFIFLSVCYTISWNLLGKKIRYILKGSKENQQ >Mature_378_residues SEQRQDKNLLSEPHKTESDEIEIDLVDIFRKIIAIRRKLYKAIGVGFIIGMIVAVSIPKQYTVKVTLSPEMGSSKGGNGL AGLAASFLGSSATTGEVSDALNASLSSDIVSSTPFLLELLDMKVALSDERTDITLMDYLDRQSSPWWNYVIGLPGMVIGG VKSLFNSDDNDNSLNKVKSGTIELTKEEGIKVNVLKKNISASVDKKTAITSVSVTLQDPKVTAVVADSVVHKLQECIVGY RISKAEEDCIYLEKLYKERQQEYYVAQKKYADYVDTHDNLILQSVRAEQERLQNDMNLAYQVYSQVANQLQVARAKVQEE KPVFAVIEPAVVPQHASSIGLRIYVLLFIFLSVCYTISWNLLGKKIRYILKGSKENQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42169; Mature: 42038
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQRQDKNLLSEPHKTESDEIEIDLVDIFRKIIAIRRKLYKAIGVGFIIGMIVAVSIPK CCCCHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QYTVKVTLSPEMGSSKGGNGLAGLAASFLGSSATTGEVSDALNASLSSDIVSSTPFLLEL CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH LDMKVALSDERTDITLMDYLDRQSSPWWNYVIGLPGMVIGGVKSLFNSDDNDNSLNKVKS HHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCC GTIELTKEEGIKVNVLKKNISASVDKKTAITSVSVTLQDPKVTAVVADSVVHKLQECIVG CCEEEECCCCCEEEEEHHCHHCCCCCHHEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHC YRISKAEEDCIYLEKLYKERQQEYYVAQKKYADYVDTHDNLILQSVRAEQERLQNDMNLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YQVYSQVANQLQVARAKVQEEKPVFAVIEPAVVPQHASSIGLRIYVLLFIFLSVCYTISW HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NLLGKKIRYILKGSKENQQ HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEQRQDKNLLSEPHKTESDEIEIDLVDIFRKIIAIRRKLYKAIGVGFIIGMIVAVSIPK CCCHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QYTVKVTLSPEMGSSKGGNGLAGLAASFLGSSATTGEVSDALNASLSSDIVSSTPFLLEL CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH LDMKVALSDERTDITLMDYLDRQSSPWWNYVIGLPGMVIGGVKSLFNSDDNDNSLNKVKS HHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCC GTIELTKEEGIKVNVLKKNISASVDKKTAITSVSVTLQDPKVTAVVADSVVHKLQECIVG CCEEEECCCCCEEEEEHHCHHCCCCCHHEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHC YRISKAEEDCIYLEKLYKERQQEYYVAQKKYADYVDTHDNLILQSVRAEQERLQNDMNLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YQVYSQVANQLQVARAKVQEEKPVFAVIEPAVVPQHASSIGLRIYVLLFIFLSVCYTISW HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NLLGKKIRYILKGSKENQQ HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA