| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346753
Identifier: 29346753
GI number: 29346753
Start: 1668653
End: 1669720
Strand: Reverse
Name: 29346753
Synonym: BT_1343
Alternate gene names: NA
Gene position: 1669720-1668653 (Counterclockwise)
Preceding gene: 29346754
Following gene: 29346752
Centisome position: 26.67
GC content: 29.59
Gene sequence:
>1068_bases ATGACTATTTTTTATTATTCCTTTATTATATTGGCGTTATTAGCTTGTTTAACGGTGAGTTTTCGTATAAAAAAACAACA ATATCTTATTTTATATTTATTTGTGATCGTATTGTTATCATTATTGGCTGGACTGAGATATGATAATGCAGATTATGAAA ATTATTTAGAGATATTTAAAAACCCGTGGGAAGTTTCTCCTGATAAGGGTTTTTCGGCATTTGTTTTGATTGTAAGGTGG TTTACAACATCTCCAATTTATATGTTTTTACCGGTAGCTATAATTGCCGTAAGTTTAAATATATCTTCCTATCGTAAATA TTCTCCATATCTATTTGTTTCTGTATTGTTTTATTTTGTACATTCTTTTCTTCTGAAAGAATATGTTCAAATTCGTGCTG GGCTATCGTGTGCTATATGCTTATATGCCATACGATACATCGAATATAAAAGTCTGTGGAAATATATAGCGTGTATGGTA ATTGCTATGTCTATACATATGTCCTCTATTATCTTCTTTCCAATGTTTTGGGTATATTATTTTATGAAAAACAAAAGTAA TAGTTGTTTGATGTATTTTCTTCTATTGTCTTTTATTATTGGAACATTATATCCATTTGGGCAGGTTATAAAGGCATATG TCCCTTTTCTTGATGAAACAAGTAGAATTGCAACTTATGCTAATTGGGACCAATTTAATAATGAGATAGGGATCTTGACT AATTTTACAACACTGAAACAGATTATTTTGTGTGTGTTGTGTTATATCTATTGGACTAGGTTAAAGGAGGTAATTTCGTG CTTTTCAGTTCTTTATCTGGCTTATGTGTTATCTACTTGTTGGTTGATGCTGTTTAATGATTTTGTGATAATAGGGGCAC GTATGGCAACTTTTCTTTCTGTAGGAGAACCCATTTTTTTTGCCGGATTTTTATGCTTATTCAATAAACAGAGTCGGATT TTAGTTACATTATTCTTTATAATTATTTCATGTATTATTATGGATGTAAATCTTCATACAAAGAATCTTGGTGAGTTCAA ATTATATCCATTAACTTCTTTGTTTTGA
Upstream 100 bases:
>100_bases AAGAAAAAAAAAGAGTTGTACGCGATATGGTGGAGACAAATTTTAGCAAATATGTCACGGCTAGAGCTTATGAAGACCAA TATATATCTTTGATTTCGGA
Downstream 100 bases:
>100_bases GATAGAGTTTTTATAGATAAATTTTATAATGAAAGTATTAGTTACAGGGGCTGCTGGATTTATTGGTAGTTTTACTTCAA AAAAGCTGTTAGAGCAAGGA
Product: putative capsule biosynthesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTIFYYSFIILALLACLTVSFRIKKQQYLILYLFVIVLLSLLAGLRYDNADYENYLEIFKNPWEVSPDKGFSAFVLIVRW FTTSPIYMFLPVAIIAVSLNISSYRKYSPYLFVSVLFYFVHSFLLKEYVQIRAGLSCAICLYAIRYIEYKSLWKYIACMV IAMSIHMSSIIFFPMFWVYYFMKNKSNSCLMYFLLLSFIIGTLYPFGQVIKAYVPFLDETSRIATYANWDQFNNEIGILT NFTTLKQIILCVLCYIYWTRLKEVISCFSVLYLAYVLSTCWLMLFNDFVIIGARMATFLSVGEPIFFAGFLCLFNKQSRI LVTLFFIIISCIIMDVNLHTKNLGEFKLYPLTSLF
Sequences:
>Translated_355_residues MTIFYYSFIILALLACLTVSFRIKKQQYLILYLFVIVLLSLLAGLRYDNADYENYLEIFKNPWEVSPDKGFSAFVLIVRW FTTSPIYMFLPVAIIAVSLNISSYRKYSPYLFVSVLFYFVHSFLLKEYVQIRAGLSCAICLYAIRYIEYKSLWKYIACMV IAMSIHMSSIIFFPMFWVYYFMKNKSNSCLMYFLLLSFIIGTLYPFGQVIKAYVPFLDETSRIATYANWDQFNNEIGILT NFTTLKQIILCVLCYIYWTRLKEVISCFSVLYLAYVLSTCWLMLFNDFVIIGARMATFLSVGEPIFFAGFLCLFNKQSRI LVTLFFIIISCIIMDVNLHTKNLGEFKLYPLTSLF >Mature_354_residues TIFYYSFIILALLACLTVSFRIKKQQYLILYLFVIVLLSLLAGLRYDNADYENYLEIFKNPWEVSPDKGFSAFVLIVRWF TTSPIYMFLPVAIIAVSLNISSYRKYSPYLFVSVLFYFVHSFLLKEYVQIRAGLSCAICLYAIRYIEYKSLWKYIACMVI AMSIHMSSIIFFPMFWVYYFMKNKSNSCLMYFLLLSFIIGTLYPFGQVIKAYVPFLDETSRIATYANWDQFNNEIGILTN FTTLKQIILCVLCYIYWTRLKEVISCFSVLYLAYVLSTCWLMLFNDFVIIGARMATFLSVGEPIFFAGFLCLFNKQSRIL VTLFFIIISCIIMDVNLHTKNLGEFKLYPLTSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41633; Mature: 41502
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFYYSFIILALLACLTVSFRIKKQQYLILYLFVIVLLSLLAGLRYDNADYENYLEIFK CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC NPWEVSPDKGFSAFVLIVRWFTTSPIYMFLPVAIIAVSLNISSYRKYSPYLFVSVLFYFV CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH HSFLLKEYVQIRAGLSCAICLYAIRYIEYKSLWKYIACMVIAMSIHMSSIIFFPMFWVYY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMKNKSNSCLMYFLLLSFIIGTLYPFGQVIKAYVPFLDETSRIATYANWDQFNNEIGILT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCEEEEE NFTTLKQIILCVLCYIYWTRLKEVISCFSVLYLAYVLSTCWLMLFNDFVIIGARMATFLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGEPIFFAGFLCLFNKQSRILVTLFFIIISCIIMDVNLHTKNLGEFKLYPLTSLF CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHCC >Mature Secondary Structure TIFYYSFIILALLACLTVSFRIKKQQYLILYLFVIVLLSLLAGLRYDNADYENYLEIFK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC NPWEVSPDKGFSAFVLIVRWFTTSPIYMFLPVAIIAVSLNISSYRKYSPYLFVSVLFYFV CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH HSFLLKEYVQIRAGLSCAICLYAIRYIEYKSLWKYIACMVIAMSIHMSSIIFFPMFWVYY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMKNKSNSCLMYFLLLSFIIGTLYPFGQVIKAYVPFLDETSRIATYANWDQFNNEIGILT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCEEEEE NFTTLKQIILCVLCYIYWTRLKEVISCFSVLYLAYVLSTCWLMLFNDFVIIGARMATFLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGEPIFFAGFLCLFNKQSRILVTLFFIIISCIIMDVNLHTKNLGEFKLYPLTSLF CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA