| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346412
Identifier: 29346412
GI number: 29346412
Start: 1247645
End: 1249504
Strand: Reverse
Name: 29346412
Synonym: BT_1002
Alternate gene names: NA
Gene position: 1249504-1247645 (Counterclockwise)
Preceding gene: 29346413
Following gene: 29346411
Centisome position: 19.96
GC content: 49.46
Gene sequence:
>1860_bases ATGAAAAAGTTATTGGTAACAACTATATGCCTGCTGGGTGCACATCTGCTGTCAGCAGGTGAAATCTGGATTTCGCCGCA GGGGAATGATCTCAATGACGGTACACGTCCATCTCCGAAAGCGACGTTGACTTCTGCTTTGCGTCAGGCACGCGAATGGC GCCGGACAGATGATGAACGGGTGCGGGGAGGAATTACGATCTGTATGGAAGGCGGTACGTATGCACTCTATGAACCGGTG TTTATTCGTCCGGAAGACAGCGGGACGGAGGATTCTCCCACGGTGATCCGCCCGGTAGCTGATGAAAAAGTGGTATTGAG TGGCGGCATCCGGATCGGTGGATGGAAGAAGCAGGGAAAACTCTGGGTAGCGGATGTGCCCATGTTCAACGGGCGGCCAC TGGATTTCCGTCAGTTATGGGTGAATGGTAAGAAAGCTGTCCGTGCCCGTGACGTAGAGGATTTTGAGAAGATGAACCGC ATTTGCAGTGTGGACGAGAAGAATGAGATTCTTTATGTTCCTGCGGTTGCCATACGCAGACTGGTAGACGGAAAAGGGGC TTTGAAGGCCAAATATGCAGAGATGGTATTGCATCAGATGTGGTGTGTGGCCAATCTTCGTATTCGTTCTGTCGAACTGG CTGGAGACAGTGCCGCAATACGTTTTCATCAGCCGGAGAGCCGGATTCAGTTTGAGCATCCCTGGCCACGTCCGATGGTA ACGACAGATGGGCATAATTCTGCTTTTTATCTGACGAATGCCCGTGAACTACTGGATGTAGCGGGAGAATGGTATCACGA CATAGATGCCCGTAAAGTCTATTATTATCCTCGGGAAGGAGAGAAGTTGCAGGATGCCGGCACGGAAGTGATAGTGCCTG CCATAGAGACATTGATACAAGTAAAAGGGACGTTCGACCGTCCTGTTTCACATATCCGTTTTGAGAAAATCACGTTCTCT CATACGACTTGGATGCGTCCGTCTGAGAAAGGCCATGTTCCTCTTCAGGCGGGAATGTATCTGACAGACGGTTATCGTAT TGACCCGAAAATGGAACGGGACTATCTGAATCATCCCTTGGATAATCAAGGATGGCTGGGACGTCCTGCCGCGGCTGTAA GCGTGGCTGCTGCCAATCAGATCGACTTTGAGCGCTGTCGGTTCGATCATTTAGGCTCAACCGGGCTGGATTATGAAGAA GCCGTGCAGGGCGGTGTCGTTCGTGGCTGTCTTTTCCGTGATATTGCGGGGAACGGACTGGTGGTCGGCAGTTTCTCTCC GGCTGCCCATGAAACACATTTACCTTATGACCCTACCGACCTTCGGGAAGTATGCGCGCATCAACAAATCAGTAATTGCT ACTTTACCGAAGTGGGTAATGAAGATTGGGGATGTCTTGCAATCCTTGCGGGCTATGTGAAAGATATTAATATAGAACAC AATGAAATCTGCGAAGTTCCTTATAGCGGCATCAGCCTTGGCTGGGGCTGGACGCAGACAGTGAACTGTATGCGTAACAA CAGAGTGCACGCGAATCTGATTCATCACTATGCAAAGCATATGTATGACGTAGCCGGAGTTTATACACTGGGCTCGCAGC CGAAAAGTTATGTAACTGAGAATTGCGTACATAGCATTTATAAGCCAGGTTATGTACACGATCCCAATCATTGGTTTTAT CTCTATACGGACGAAGGCTCTTCTTTTATCACTGTACGCGATAACTGGACGGAAGGGGAGAAGTATCTGCAAAATGCGAA CGGTCCCGGAAATGTATGGGAGAACAATGGTCCGCAGGTAGATACAGTCATTCGTGAACGTGCAGGGTTGGAAGCCGAAT ATAGGGACTTGAAGAAATAA
Upstream 100 bases:
>100_bases GATATTCGTCTGATTCCTTATTATGCATGGGGAAACAGAGGTAAAGGAGAGATGACAGTCTGGATGCCGCTAGCAAGATA ACCCATTGTAAAAAAGAAAA
Downstream 100 bases:
>100_bases GAAAAATGAAAAAGAAATGCATGATACTTTTGGGTGCCTTGTCATTGGCAAGCAGCACCTTTGCCCAAACTTGGATATGG TATCCGGGGGACTATGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPV FIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNR ICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFS HTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEE AVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFY LYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLKK
Sequences:
>Translated_619_residues MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPV FIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNR ICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFS HTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEE AVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFY LYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLKK >Mature_619_residues MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPV FIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNR ICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFS HTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEE AVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFY LYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69984; Mature: 69984
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDER CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH VRGGITICMEGGTYALYEPVFIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGK HCCCEEEEEECCEEEEECCEEEECCCCCCCCCCEEEEECCCCEEEEECCEEECCEECCCC LWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDEKNEILYVPAVAIRR EEEEECCCCCCCCCCHHHHEECCCHHHHHCCHHHHHHHHHHCCCCCCCCEEEECHHHHHH LVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV HHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCEE TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQ EECCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCEEEHHHHHHHHH VKGTFDRPVSHIRFEKITFSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPL HCCCCCCCHHHEEEEEEEECCCEECCCCCCCCCEEECCEEEECCEEECCCHHHHHHCCCC DNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIAGNGL CCCCCCCCCHHHEEEHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCE VVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCH NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTE HHEECCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHH NCVHSIYKPGYVHDPNHWFYLYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQV HHHHHHCCCCEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCH DTVIRERAGLEAEYRDLKK HHHHHHHCCCCHHHHHHCC >Mature Secondary Structure MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDER CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH VRGGITICMEGGTYALYEPVFIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGK HCCCEEEEEECCEEEEECCEEEECCCCCCCCCCEEEEECCCCEEEEECCEEECCEECCCC LWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDEKNEILYVPAVAIRR EEEEECCCCCCCCCCHHHHEECCCHHHHHCCHHHHHHHHHHCCCCCCCCEEEECHHHHHH LVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV HHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCEE TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQ EECCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCEEEHHHHHHHHH VKGTFDRPVSHIRFEKITFSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPL HCCCCCCCHHHEEEEEEEECCCEECCCCCCCCCEEECCEEEECCEEECCCHHHHHHCCCC DNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIAGNGL CCCCCCCCCHHHEEEHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCE VVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCH NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTE HHEECCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHH NCVHSIYKPGYVHDPNHWFYLYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQV HHHHHHCCCCEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCH DTVIRERAGLEAEYRDLKK HHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA