Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346412

Identifier: 29346412

GI number: 29346412

Start: 1247645

End: 1249504

Strand: Reverse

Name: 29346412

Synonym: BT_1002

Alternate gene names: NA

Gene position: 1249504-1247645 (Counterclockwise)

Preceding gene: 29346413

Following gene: 29346411

Centisome position: 19.96

GC content: 49.46

Gene sequence:

>1860_bases
ATGAAAAAGTTATTGGTAACAACTATATGCCTGCTGGGTGCACATCTGCTGTCAGCAGGTGAAATCTGGATTTCGCCGCA
GGGGAATGATCTCAATGACGGTACACGTCCATCTCCGAAAGCGACGTTGACTTCTGCTTTGCGTCAGGCACGCGAATGGC
GCCGGACAGATGATGAACGGGTGCGGGGAGGAATTACGATCTGTATGGAAGGCGGTACGTATGCACTCTATGAACCGGTG
TTTATTCGTCCGGAAGACAGCGGGACGGAGGATTCTCCCACGGTGATCCGCCCGGTAGCTGATGAAAAAGTGGTATTGAG
TGGCGGCATCCGGATCGGTGGATGGAAGAAGCAGGGAAAACTCTGGGTAGCGGATGTGCCCATGTTCAACGGGCGGCCAC
TGGATTTCCGTCAGTTATGGGTGAATGGTAAGAAAGCTGTCCGTGCCCGTGACGTAGAGGATTTTGAGAAGATGAACCGC
ATTTGCAGTGTGGACGAGAAGAATGAGATTCTTTATGTTCCTGCGGTTGCCATACGCAGACTGGTAGACGGAAAAGGGGC
TTTGAAGGCCAAATATGCAGAGATGGTATTGCATCAGATGTGGTGTGTGGCCAATCTTCGTATTCGTTCTGTCGAACTGG
CTGGAGACAGTGCCGCAATACGTTTTCATCAGCCGGAGAGCCGGATTCAGTTTGAGCATCCCTGGCCACGTCCGATGGTA
ACGACAGATGGGCATAATTCTGCTTTTTATCTGACGAATGCCCGTGAACTACTGGATGTAGCGGGAGAATGGTATCACGA
CATAGATGCCCGTAAAGTCTATTATTATCCTCGGGAAGGAGAGAAGTTGCAGGATGCCGGCACGGAAGTGATAGTGCCTG
CCATAGAGACATTGATACAAGTAAAAGGGACGTTCGACCGTCCTGTTTCACATATCCGTTTTGAGAAAATCACGTTCTCT
CATACGACTTGGATGCGTCCGTCTGAGAAAGGCCATGTTCCTCTTCAGGCGGGAATGTATCTGACAGACGGTTATCGTAT
TGACCCGAAAATGGAACGGGACTATCTGAATCATCCCTTGGATAATCAAGGATGGCTGGGACGTCCTGCCGCGGCTGTAA
GCGTGGCTGCTGCCAATCAGATCGACTTTGAGCGCTGTCGGTTCGATCATTTAGGCTCAACCGGGCTGGATTATGAAGAA
GCCGTGCAGGGCGGTGTCGTTCGTGGCTGTCTTTTCCGTGATATTGCGGGGAACGGACTGGTGGTCGGCAGTTTCTCTCC
GGCTGCCCATGAAACACATTTACCTTATGACCCTACCGACCTTCGGGAAGTATGCGCGCATCAACAAATCAGTAATTGCT
ACTTTACCGAAGTGGGTAATGAAGATTGGGGATGTCTTGCAATCCTTGCGGGCTATGTGAAAGATATTAATATAGAACAC
AATGAAATCTGCGAAGTTCCTTATAGCGGCATCAGCCTTGGCTGGGGCTGGACGCAGACAGTGAACTGTATGCGTAACAA
CAGAGTGCACGCGAATCTGATTCATCACTATGCAAAGCATATGTATGACGTAGCCGGAGTTTATACACTGGGCTCGCAGC
CGAAAAGTTATGTAACTGAGAATTGCGTACATAGCATTTATAAGCCAGGTTATGTACACGATCCCAATCATTGGTTTTAT
CTCTATACGGACGAAGGCTCTTCTTTTATCACTGTACGCGATAACTGGACGGAAGGGGAGAAGTATCTGCAAAATGCGAA
CGGTCCCGGAAATGTATGGGAGAACAATGGTCCGCAGGTAGATACAGTCATTCGTGAACGTGCAGGGTTGGAAGCCGAAT
ATAGGGACTTGAAGAAATAA

Upstream 100 bases:

>100_bases
GATATTCGTCTGATTCCTTATTATGCATGGGGAAACAGAGGTAAAGGAGAGATGACAGTCTGGATGCCGCTAGCAAGATA
ACCCATTGTAAAAAAGAAAA

Downstream 100 bases:

>100_bases
GAAAAATGAAAAAGAAATGCATGATACTTTTGGGTGCCTTGTCATTGGCAAGCAGCACCTTTGCCCAAACTTGGATATGG
TATCCGGGGGACTATGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPV
FIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNR
ICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV
TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFS
HTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEE
AVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH
NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFY
LYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLKK

Sequences:

>Translated_619_residues
MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPV
FIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNR
ICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV
TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFS
HTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEE
AVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH
NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFY
LYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLKK
>Mature_619_residues
MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITICMEGGTYALYEPV
FIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNR
ICSVDEKNEILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV
TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKITFS
HTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEE
AVQGGVVRGCLFRDIAGNGLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH
NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFY
LYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69984; Mature: 69984

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDER
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
VRGGITICMEGGTYALYEPVFIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGK
HCCCEEEEEECCEEEEECCEEEECCCCCCCCCCEEEEECCCCEEEEECCEEECCEECCCC
LWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDEKNEILYVPAVAIRR
EEEEECCCCCCCCCCHHHHEECCCHHHHHCCHHHHHHHHHHCCCCCCCCEEEECHHHHHH
LVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV
HHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCEE
TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQ
EECCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCEEEHHHHHHHHH
VKGTFDRPVSHIRFEKITFSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPL
HCCCCCCCHHHEEEEEEEECCCEECCCCCCCCCEEECCEEEECCEEECCCHHHHHHCCCC
DNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIAGNGL
CCCCCCCCCHHHEEEHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCE
VVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCH
NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTE
HHEECCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHH
NCVHSIYKPGYVHDPNHWFYLYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQV
HHHHHHCCCCEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCH
DTVIRERAGLEAEYRDLKK
HHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MKKLLVTTICLLGAHLLSAGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDER
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
VRGGITICMEGGTYALYEPVFIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQGK
HCCCEEEEEECCEEEEECCEEEECCCCCCCCCCEEEEECCCCEEEEECCEEECCEECCCC
LWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDEKNEILYVPAVAIRR
EEEEECCCCCCCCCCHHHHEECCCHHHHHCCHHHHHHHHHHCCCCCCCCEEEECHHHHHH
LVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSAAIRFHQPESRIQFEHPWPRPMV
HHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCEE
TTDGHNSAFYLTNARELLDVAGEWYHDIDARKVYYYPREGEKLQDAGTEVIVPAIETLIQ
EECCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCEEEHHHHHHHHH
VKGTFDRPVSHIRFEKITFSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPL
HCCCCCCCHHHEEEEEEEECCCEECCCCCCCCCEEECCEEEECCEEECCCHHHHHHCCCC
DNQGWLGRPAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIAGNGL
CCCCCCCCCHHHEEEHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCE
VVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAILAGYVKDINIEH
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCH
NEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYAKHMYDVAGVYTLGSQPKSYVTE
HHEECCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHH
NCVHSIYKPGYVHDPNHWFYLYTDEGSSFITVRDNWTEGEKYLQNANGPGNVWENNGPQV
HHHHHHCCCCEEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCH
DTVIRERAGLEAEYRDLKK
HHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA