| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346407
Identifier: 29346407
GI number: 29346407
Start: 1236402
End: 1239023
Strand: Reverse
Name: 29346407
Synonym: BT_0997
Alternate gene names: NA
Gene position: 1239023-1236402 (Counterclockwise)
Preceding gene: 29346410
Following gene: 29346406
Centisome position: 19.79
GC content: 46.26
Gene sequence:
>2622_bases ATGACTCCGCCGGATGCGTCAAACCGCGTTCTGTTCAGTGCGGAACAGTTACAGTCTACCCTGGATAAAGCCGGTTATCA GGTAATGATGCAACAAGGGGATACCACATTCTCCGATCCTGAAATAAAGACGATTCTGCTGACGGAAGTGAATGATACGA CGCTTAAGAAAGAAGGCTTTCATATTACGACTGCCGGTAATCTGACAAGAGTATGCGGCAGAGACGGAAGCGGAGTGATC TACGGAAGTCGCGAACTGATAGACCGTGTGAACGACTCTGATGGCAAGCTTGACTTTCCGGAAGAGTTGAAAGATGGTCC GGAAATGGTGCTCCGCGGTGCTTGTGTCGGTCTGCAGAAAATGACTTACCTGCCGGGACACGGTGTGTATGAGTATCCGT ATACTCCGGAAAGTTTCCCTTGGTTTTATGATAAGGAACAATGGATTAAATACCTCGATATGCTGGTAGCCAATCGCATG AATTCCCTGTATCTCTGGAATGGTCATCCGTTTGCATCGTTGGTCAAACTGGAAGATTATCCGTTTGCGCTGGAAGTAGA CGAAGAGACGTTCAAGAAGAATGAAGAGATGTTTTCTTTCCTTACGGAAGAAGCGGACAAACGTGGTATCTTCGTGATAC AGATGTTCTACAATATCATCCTTTCCAAACCATTTGCAGAGCATTATGGACTGAAAACGCAGGACCGTAACCGTCCCATC ACTCCTCTGATTGCAGACTATACCCGTAAAAGCATTGCCGCATTTATAGAGAAATATCCGAATGTGGGACTGCTGGTTTG TTTGGGTGAAGCCATGTGTACGGTAGAAGATGATGTGGAATGGTTCACAAAGACCATCATTCCGGGTGTAAAAGACGGAT TACAGGCATTGGGACGTACCGACGAACCGCCTCTTTTGCTGCGCGCACACGATACGGACTGCAAACTGGTAATGGATGCG GCATTGCCGATATATAAGAATCTTTATACGATGCATAAGTATAATGGTGAATCACTGACAACTTACGAGCCTCGTGGCCC CTGGTCGAAGATTCATACGGATTTGAGCTCTTTAGGATCTATTCATATCAGTAATGTACATATCCTGGCAAATCTGGAAC CATTCCGTTGGGGCTCTCCAGACTTCGTACAGAAGGCGGTACAAGCGATGCACAACGTGCACGGTGCCAATGCATTGCAC CTTTATCCGCAGGCTTCGTACTGGGATTGGCCATATACAGCCGATAAACTGCCAAATGACGAACGGGAATTCCAACTGGA CCGCGACTGGATCTGGTATCAGACCTGGGGACGTTATGCGTGGAACAGCCATCGGGATCGTGCTGACGAGATCGGTTACT GGAATCATCAACTGGGACAGTTCTACGGAACATCCGACGAGAATGCAGGCAATATTCGCATTGCTTATGAAGAAAGCGGA GAAATTGCCCCGAAGTTATTACGTCGTTTTGGTATCACAGAAGGAAACCGTCAGACGTTATTGTTGGGTATGTTTATGAG CCAGCTTGTCAATCCGTACAAATATACCATCTATCCGGGATTCTATGAAAGCTGCGGACCGGAAGGCGAAAAGCTGATCG AATTTGTAGAGAAAGAATGGAAGAATCAGCCTCATGTAGGTGAGATGCCGCTGGACATTGTCGCTCAGGTGATTGAACAC GGTGATAAGGCAATAGCAGCGATTGACAAGGCAGCCGGTTCCATCTCCTCTAACAAAGAAGAATTCGCACGTCTGCAGAA TGATATGCATTGTTACCGTGAGTTTGCCTATGCGTTTAATCTGAAAGTGAAAGCTGCGAAACTGGTATTGGACTATCAGT GGGGAAAAGACATGAAGAATCTGGAAGAAGCTATCCCTCTGATGGAACAAAGTCTGGAACATTACCGCAAACTAGTGGAA CTGACAGACGAGCATTATTTATATGCCAACAGTATGCAGACTGCCCAGCGCCGTATTCCTATCGGCGGGGACGATGGCCA TAATAAGACATGGAAAGAACTGCTGGTACACTACGAAAAAGAATTGGAGAACTTCAAGGCGAACCTTGCCATGCTGAAAG AAAAGCAAAATGGCAATGCGGTGACTGAAACGGTAGAGATCGCTGCCTGGGCTCCTGCGTATGTGAACTTAATATCGAAT TATCCGACAGTGAAACTGAATGAAGGAACTTCCTTGTTCACGGATCTTCCGGGCAAAATAGAAGCAATAGCTCCTGAACT GAAGGGAATGAAGGCATTCCGCTTTAATGGAAATGAACAACGGGAAAAAGGAACAAGCATTACTTTTGAAACAAATGCTC CAGTCAAACTATTAGTAGCCTACTTTAAAGACGATCAGAAGAAGTATGCCAAAGCTCCGAAACTGGAGATTGATGCATCT GCCAACGATTACGGTCAGGCGGAACCTGTACTGACCAATGCAATCCATATCAATGGAATGCCATTAGCGAATGTACACGC ATATAGCTTTCCGGCAGGAAAACATACGTTGATGTTGCCCAAAGGCTACCTTCAGGTTCTTGGATTTACGGCTGCGGATA TGAAAACTCGTAATGCCGGACTTGCCGGAGACGAAGAAACGATGGACTGGTTGTTTTACTAA
Upstream 100 bases:
>100_bases TTTTATAATATACATCAGAAGAATGAAAAATACCAAATTGTTCATGTTTGCGGCATGCACCCTTTTCTTAGCTGCGTGTG GTAAGCAAACCGTGAAAATA
Downstream 100 bases:
>100_bases TGAACGATTGCTGTAAGCCGCTATTTAGTTTCAAGGCTTGAAACTATTAGTTTCATGCCTTGAAACCATTTGTTCCAAAG CTTGAAACAAATAGCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 873; Mature: 872
Protein sequence:
>873_residues MTPPDASNRVLFSAEQLQSTLDKAGYQVMMQQGDTTFSDPEIKTILLTEVNDTTLKKEGFHITTAGNLTRVCGRDGSGVI YGSRELIDRVNDSDGKLDFPEELKDGPEMVLRGACVGLQKMTYLPGHGVYEYPYTPESFPWFYDKEQWIKYLDMLVANRM NSLYLWNGHPFASLVKLEDYPFALEVDEETFKKNEEMFSFLTEEADKRGIFVIQMFYNIILSKPFAEHYGLKTQDRNRPI TPLIADYTRKSIAAFIEKYPNVGLLVCLGEAMCTVEDDVEWFTKTIIPGVKDGLQALGRTDEPPLLLRAHDTDCKLVMDA ALPIYKNLYTMHKYNGESLTTYEPRGPWSKIHTDLSSLGSIHISNVHILANLEPFRWGSPDFVQKAVQAMHNVHGANALH LYPQASYWDWPYTADKLPNDEREFQLDRDWIWYQTWGRYAWNSHRDRADEIGYWNHQLGQFYGTSDENAGNIRIAYEESG EIAPKLLRRFGITEGNRQTLLLGMFMSQLVNPYKYTIYPGFYESCGPEGEKLIEFVEKEWKNQPHVGEMPLDIVAQVIEH GDKAIAAIDKAAGSISSNKEEFARLQNDMHCYREFAYAFNLKVKAAKLVLDYQWGKDMKNLEEAIPLMEQSLEHYRKLVE LTDEHYLYANSMQTAQRRIPIGGDDGHNKTWKELLVHYEKELENFKANLAMLKEKQNGNAVTETVEIAAWAPAYVNLISN YPTVKLNEGTSLFTDLPGKIEAIAPELKGMKAFRFNGNEQREKGTSITFETNAPVKLLVAYFKDDQKKYAKAPKLEIDAS ANDYGQAEPVLTNAIHINGMPLANVHAYSFPAGKHTLMLPKGYLQVLGFTAADMKTRNAGLAGDEETMDWLFY
Sequences:
>Translated_873_residues MTPPDASNRVLFSAEQLQSTLDKAGYQVMMQQGDTTFSDPEIKTILLTEVNDTTLKKEGFHITTAGNLTRVCGRDGSGVI YGSRELIDRVNDSDGKLDFPEELKDGPEMVLRGACVGLQKMTYLPGHGVYEYPYTPESFPWFYDKEQWIKYLDMLVANRM NSLYLWNGHPFASLVKLEDYPFALEVDEETFKKNEEMFSFLTEEADKRGIFVIQMFYNIILSKPFAEHYGLKTQDRNRPI TPLIADYTRKSIAAFIEKYPNVGLLVCLGEAMCTVEDDVEWFTKTIIPGVKDGLQALGRTDEPPLLLRAHDTDCKLVMDA ALPIYKNLYTMHKYNGESLTTYEPRGPWSKIHTDLSSLGSIHISNVHILANLEPFRWGSPDFVQKAVQAMHNVHGANALH LYPQASYWDWPYTADKLPNDEREFQLDRDWIWYQTWGRYAWNSHRDRADEIGYWNHQLGQFYGTSDENAGNIRIAYEESG EIAPKLLRRFGITEGNRQTLLLGMFMSQLVNPYKYTIYPGFYESCGPEGEKLIEFVEKEWKNQPHVGEMPLDIVAQVIEH GDKAIAAIDKAAGSISSNKEEFARLQNDMHCYREFAYAFNLKVKAAKLVLDYQWGKDMKNLEEAIPLMEQSLEHYRKLVE LTDEHYLYANSMQTAQRRIPIGGDDGHNKTWKELLVHYEKELENFKANLAMLKEKQNGNAVTETVEIAAWAPAYVNLISN YPTVKLNEGTSLFTDLPGKIEAIAPELKGMKAFRFNGNEQREKGTSITFETNAPVKLLVAYFKDDQKKYAKAPKLEIDAS ANDYGQAEPVLTNAIHINGMPLANVHAYSFPAGKHTLMLPKGYLQVLGFTAADMKTRNAGLAGDEETMDWLFY >Mature_872_residues TPPDASNRVLFSAEQLQSTLDKAGYQVMMQQGDTTFSDPEIKTILLTEVNDTTLKKEGFHITTAGNLTRVCGRDGSGVIY GSRELIDRVNDSDGKLDFPEELKDGPEMVLRGACVGLQKMTYLPGHGVYEYPYTPESFPWFYDKEQWIKYLDMLVANRMN SLYLWNGHPFASLVKLEDYPFALEVDEETFKKNEEMFSFLTEEADKRGIFVIQMFYNIILSKPFAEHYGLKTQDRNRPIT PLIADYTRKSIAAFIEKYPNVGLLVCLGEAMCTVEDDVEWFTKTIIPGVKDGLQALGRTDEPPLLLRAHDTDCKLVMDAA LPIYKNLYTMHKYNGESLTTYEPRGPWSKIHTDLSSLGSIHISNVHILANLEPFRWGSPDFVQKAVQAMHNVHGANALHL YPQASYWDWPYTADKLPNDEREFQLDRDWIWYQTWGRYAWNSHRDRADEIGYWNHQLGQFYGTSDENAGNIRIAYEESGE IAPKLLRRFGITEGNRQTLLLGMFMSQLVNPYKYTIYPGFYESCGPEGEKLIEFVEKEWKNQPHVGEMPLDIVAQVIEHG DKAIAAIDKAAGSISSNKEEFARLQNDMHCYREFAYAFNLKVKAAKLVLDYQWGKDMKNLEEAIPLMEQSLEHYRKLVEL TDEHYLYANSMQTAQRRIPIGGDDGHNKTWKELLVHYEKELENFKANLAMLKEKQNGNAVTETVEIAAWAPAYVNLISNY PTVKLNEGTSLFTDLPGKIEAIAPELKGMKAFRFNGNEQREKGTSITFETNAPVKLLVAYFKDDQKKYAKAPKLEIDASA NDYGQAEPVLTNAIHINGMPLANVHAYSFPAGKHTLMLPKGYLQVLGFTAADMKTRNAGLAGDEETMDWLFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99535; Mature: 99404
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPDASNRVLFSAEQLQSTLDKAGYQVMMQQGDTTFSDPEIKTILLTEVNDTTLKKEGF CCCCCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCEECCCCE HITTAGNLTRVCGRDGSGVIYGSRELIDRVNDSDGKLDFPEELKDGPEMVLRGACVGLQK EEEECCCCHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH MTYLPGHGVYEYPYTPESFPWFYDKEQWIKYLDMLVANRMNSLYLWNGHPFASLVKLEDY HEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHEEEECCC PFALEVDEETFKKNEEMFSFLTEEADKRGIFVIQMFYNIILSKPFAEHYGLKTQDRNRPI CEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHCCCCCCCCCCCC TPLIADYTRKSIAAFIEKYPNVGLLVCLGEAMCTVEDDVEWFTKTIIPGVKDGLQALGRT CHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHEEEHHHHHHHHHHHCCCHHHHHHHCCCC DEPPLLLRAHDTDCKLVMDAALPIYKNLYTMHKYNGESLTTYEPRGPWSKIHTDLSSLGS CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHHHHHHHCC IHISNVHILANLEPFRWGSPDFVQKAVQAMHNVHGANALHLYPQASYWDWPYTADKLPND EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC EREFQLDRDWIWYQTWGRYAWNSHRDRADEIGYWNHQLGQFYGTSDENAGNIRIAYEESG CHHEEECCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCC EIAPKLLRRFGITEGNRQTLLLGMFMSQLVNPYKYTIYPGFYESCGPEGEKLIEFVEKEW CHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHHHHHH KNQPHVGEMPLDIVAQVIEHGDKAIAAIDKAAGSISSNKEEFARLQNDMHCYREFAYAFN CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHE LKVKAAKLVLDYQWGKDMKNLEEAIPLMEQSLEHYRKLVELTDEHYLYANSMQTAQRRIP EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCC IGGDDGHNKTWKELLVHYEKELENFKANLAMLKEKQNGNAVTETVEIAAWAPAYVNLISN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHHCC YPTVKLNEGTSLFTDLPGKIEAIAPELKGMKAFRFNGNEQREKGTSITFETNAPVKLLVA CCEEEECCCCEEECCCCCCHHHHCHHHCCCEEEECCCCHHHCCCCEEEEECCCCHHHHHH YFKDDQKKYAKAPKLEIDASANDYGQAEPVLTNAIHINGMPLANVHAYSFPAGKHTLMLP HHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCEEEECC KGYLQVLGFTAADMKTRNAGLAGDEETMDWLFY HHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure TPPDASNRVLFSAEQLQSTLDKAGYQVMMQQGDTTFSDPEIKTILLTEVNDTTLKKEGF CCCCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCEECCCCE HITTAGNLTRVCGRDGSGVIYGSRELIDRVNDSDGKLDFPEELKDGPEMVLRGACVGLQK EEEECCCCHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH MTYLPGHGVYEYPYTPESFPWFYDKEQWIKYLDMLVANRMNSLYLWNGHPFASLVKLEDY HEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHEEEECCC PFALEVDEETFKKNEEMFSFLTEEADKRGIFVIQMFYNIILSKPFAEHYGLKTQDRNRPI CEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCHHHHCCCCCCCCCCCC TPLIADYTRKSIAAFIEKYPNVGLLVCLGEAMCTVEDDVEWFTKTIIPGVKDGLQALGRT CHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHEEEHHHHHHHHHHHCCCHHHHHHHCCCC DEPPLLLRAHDTDCKLVMDAALPIYKNLYTMHKYNGESLTTYEPRGPWSKIHTDLSSLGS CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHHHHHHHCC IHISNVHILANLEPFRWGSPDFVQKAVQAMHNVHGANALHLYPQASYWDWPYTADKLPND EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC EREFQLDRDWIWYQTWGRYAWNSHRDRADEIGYWNHQLGQFYGTSDENAGNIRIAYEESG CHHEEECCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCC EIAPKLLRRFGITEGNRQTLLLGMFMSQLVNPYKYTIYPGFYESCGPEGEKLIEFVEKEW CHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHHHHHH KNQPHVGEMPLDIVAQVIEHGDKAIAAIDKAAGSISSNKEEFARLQNDMHCYREFAYAFN CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHE LKVKAAKLVLDYQWGKDMKNLEEAIPLMEQSLEHYRKLVELTDEHYLYANSMQTAQRRIP EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCC IGGDDGHNKTWKELLVHYEKELENFKANLAMLKEKQNGNAVTETVEIAAWAPAYVNLISN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHHCC YPTVKLNEGTSLFTDLPGKIEAIAPELKGMKAFRFNGNEQREKGTSITFETNAPVKLLVA CCEEEECCCCEEECCCCCCHHHHCHHHCCCEEEECCCCHHHCCCCEEEEECCCCHHHHHH YFKDDQKKYAKAPKLEIDASANDYGQAEPVLTNAIHINGMPLANVHAYSFPAGKHTLMLP HHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCEEEECC KGYLQVLGFTAADMKTRNAGLAGDEETMDWLFY HHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA