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The map label for this gene is 29346388

Identifier: 29346388

GI number: 29346388

Start: 1195110

End: 1195601

Strand: Reverse

Name: 29346388

Synonym: BT_0978

Alternate gene names: NA

Gene position: 1195601-1195110 (Counterclockwise)

Preceding gene: 29346389

Following gene: 29346387

Centisome position: 19.1

GC content: 37.8

Gene sequence:

>492_bases
ATGGCAGCTTTTTCGCAGCTATATGATTTGCACATCAACATTCTTTTTAATTACGGATTGAAGTTGACCATTGATAAAGA
GTTACTGAAAGATTGCATCCACGATATTTTCGTTAAGCTCTACACTAAAAAGGATGAATTAGGAACTATTGATAATTTGA
AGTCTTATTTGTTCATCTCCTTAAAGAACAAACTCTGCGATGAACTCCGCAAACGTATGTATATGTCTGATACAGCCATA
GAAGATGTAAATGCAGTAGCTCCCACAGACGTAGAAGATGACTATATGGAAGAAGAGCAACGCAAAAATGAGTTCTCGCT
GGTGAAGCGTTTACTGGACCAGCTTTCTCCCCGGCAGCGTGAAGCACTTACATTATATTATATAGAAGAAAAGAAATACG
AGGATATTTGTGAGATTATGAATATGAACTATCAGTCTGTACGCAACCTGATGCACCGTGGATTGACAAAATTGCGTAGT
CTGGCAAGTTAA

Upstream 100 bases:

>100_bases
CTGCTTAGCTTTGCAACATCAAATCAATCGAATTAATGCTATGATGGAACAGACTAATAATTCAACCGACACTTTACTCG
CTTCTTTTCAAGCGGGAAAT

Downstream 100 bases:

>100_bases
TTTTAGTAAAAAGGATATTTGGTTGAGTACATACACAGAGTAACAGCGTCCTATCTATGTAAACGCTTAAAAAGGATGCG
ATATGTGCTCTAAGGTAAAG

Product: ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase ECF-Type Sigma Factor; ECF-Type Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Region 4 Subfamily; Extracytoplasmic Function AlteRNAtive Sigma Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma; ECF-Type RNA Polymerase Sigma Factor

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAAFSQLYDLHINILFNYGLKLTIDKELLKDCIHDIFVKLYTKKDELGTIDNLKSYLFISLKNKLCDELRKRMYMSDTAI
EDVNAVAPTDVEDDYMEEEQRKNEFSLVKRLLDQLSPRQREALTLYYIEEKKYEDICEIMNMNYQSVRNLMHRGLTKLRS
LAS

Sequences:

>Translated_163_residues
MAAFSQLYDLHINILFNYGLKLTIDKELLKDCIHDIFVKLYTKKDELGTIDNLKSYLFISLKNKLCDELRKRMYMSDTAI
EDVNAVAPTDVEDDYMEEEQRKNEFSLVKRLLDQLSPRQREALTLYYIEEKKYEDICEIMNMNYQSVRNLMHRGLTKLRS
LAS
>Mature_162_residues
AAFSQLYDLHINILFNYGLKLTIDKELLKDCIHDIFVKLYTKKDELGTIDNLKSYLFISLKNKLCDELRKRMYMSDTAIE
DVNAVAPTDVEDDYMEEEQRKNEFSLVKRLLDQLSPRQREALTLYYIEEKKYEDICEIMNMNYQSVRNLMHRGLTKLRSL
AS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19350; Mature: 19218

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFSQLYDLHINILFNYGLKLTIDKELLKDCIHDIFVKLYTKKDELGTIDNLKSYLFIS
CCHHHHHHHHHHHHHEECCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LKNKLCDELRKRMYMSDTAIEDVNAVAPTDVEDDYMEEEQRKNEFSLVKRLLDQLSPRQR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EALTLYYIEEKKYEDICEIMNMNYQSVRNLMHRGLTKLRSLAS
HHEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAFSQLYDLHINILFNYGLKLTIDKELLKDCIHDIFVKLYTKKDELGTIDNLKSYLFIS
CHHHHHHHHHHHHHEECCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LKNKLCDELRKRMYMSDTAIEDVNAVAPTDVEDDYMEEEQRKNEFSLVKRLLDQLSPRQR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EALTLYYIEEKKYEDICEIMNMNYQSVRNLMHRGLTKLRSLAS
HHEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA