Click here to switch to the map view.

The map label for this gene is yjjP [H]

Identifier: 29346385

GI number: 29346385

Start: 1192543

End: 1193310

Strand: Reverse

Name: yjjP [H]

Synonym: BT_0975

Alternate gene names: 29346385

Gene position: 1193310-1192543 (Counterclockwise)

Preceding gene: 29346387

Following gene: 29346384

Centisome position: 19.06

GC content: 41.67

Gene sequence:

>768_bases
ATGAAGACAAGCGAATCTTTATTATCTATAGGTAAATTCATAGCCGAATATTCAGCCCATCTAATGGGAGCGGGGGTACA
TACCTCCCGTGTTGTACGCAATTCCAAACGTATCGGAGAAGCTTTTGGCTTAGATGTCAAACTGGGCGTATTTCATAAAA
ATATCATTCTTACTATCATCGATAAGGAGACAAGCGAAGCCTGCAACGAGGTTATAGATATTCCTGCACATCCCATCAGC
TTTGAGCATAACTCCGAACTAAGCGCTTTGAGTTGGGAAGCAGTAGACAAACAGTTATCGTTGGAAGAACTGAAAGAGAA
ATACAAAAAGATAGTCTCTGCTCCGATGATACATCCTCTGTTCGTTTTGATATTGGTAGGCTTTGCCAATGCGTCATTCT
GCAAACTGTTTGGCGGCGACTTAATCTCAATGGGAATCGTTTTCTCCGCCACTATTACAGGATTATACCTGAAACAGCAG
ATGCAAAAGAAGAAAATGAATCATTATATTATATTCATTGTTTCGGCCTTCGTCGCGTCCCTCTGTGCTTCTACCGCCTT
GATTTTCGACACAACTTCCGAGATCGCACTGGCAACCAGCGTCCTATATCTTGTACCCGGTGTTCCTTTGATTAATGGAG
TGATTGATGTTGTCGAAGGATACGTTTTGACAGGATTTGCCCGTTTGACGGAAGCCTCTTTGTTGATTGTCAGCATTGCC
ATCGGCCTTTCCTTTACATTATTAATGGTAAAAAACAGTTTAATTTGA

Upstream 100 bases:

>100_bases
ATTCTTTTTATGCAGGCAAAGGTATTTATTTTTTGTGTTTTACCTTTCCTGCTATTACTCTTTTTTGTACTTTTGCAGCC
GATTTAAAAATATCACATAC

Downstream 100 bases:

>100_bases
TATGGTAGCACTTGATATTCTTTCTGATGGTTTCTTTGCAGCGATAGCAGGTATCGGATTTGGCGCAATTTCCGATCCTC
CGTTGCGTGCGTTTAAAATG

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKTSESLLSIGKFIAEYSAHLMGAGVHTSRVVRNSKRIGEAFGLDVKLGVFHKNIILTIIDKETSEACNEVIDIPAHPIS
FEHNSELSALSWEAVDKQLSLEELKEKYKKIVSAPMIHPLFVLILVGFANASFCKLFGGDLISMGIVFSATITGLYLKQQ
MQKKKMNHYIIFIVSAFVASLCASTALIFDTTSEIALATSVLYLVPGVPLINGVIDVVEGYVLTGFARLTEASLLIVSIA
IGLSFTLLMVKNSLI

Sequences:

>Translated_255_residues
MKTSESLLSIGKFIAEYSAHLMGAGVHTSRVVRNSKRIGEAFGLDVKLGVFHKNIILTIIDKETSEACNEVIDIPAHPIS
FEHNSELSALSWEAVDKQLSLEELKEKYKKIVSAPMIHPLFVLILVGFANASFCKLFGGDLISMGIVFSATITGLYLKQQ
MQKKKMNHYIIFIVSAFVASLCASTALIFDTTSEIALATSVLYLVPGVPLINGVIDVVEGYVLTGFARLTEASLLIVSIA
IGLSFTLLMVKNSLI
>Mature_255_residues
MKTSESLLSIGKFIAEYSAHLMGAGVHTSRVVRNSKRIGEAFGLDVKLGVFHKNIILTIIDKETSEACNEVIDIPAHPIS
FEHNSELSALSWEAVDKQLSLEELKEKYKKIVSAPMIHPLFVLILVGFANASFCKLFGGDLISMGIVFSATITGLYLKQQ
MQKKKMNHYIIFIVSAFVASLCASTALIFDTTSEIALATSVLYLVPGVPLINGVIDVVEGYVLTGFARLTEASLLIVSIA
IGLSFTLLMVKNSLI

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=252, Percent_Identity=30.5555555555556, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27740; Mature: 27740

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSESLLSIGKFIAEYSAHLMGAGVHTSRVVRNSKRIGEAFGLDVKLGVFHKNIILTII
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEE
DKETSEACNEVIDIPAHPISFEHNSELSALSWEAVDKQLSLEELKEKYKKIVSAPMIHPL
ECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
FVLILVGFANASFCKLFGGDLISMGIVFSATITGLYLKQQMQKKKMNHYIIFIVSAFVAS
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCASTALIFDTTSEIALATSVLYLVPGVPLINGVIDVVEGYVLTGFARLTEASLLIVSIA
HHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLSFTLLMVKNSLI
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTSESLLSIGKFIAEYSAHLMGAGVHTSRVVRNSKRIGEAFGLDVKLGVFHKNIILTII
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEE
DKETSEACNEVIDIPAHPISFEHNSELSALSWEAVDKQLSLEELKEKYKKIVSAPMIHPL
ECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
FVLILVGFANASFCKLFGGDLISMGIVFSATITGLYLKQQMQKKKMNHYIIFIVSAFVAS
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCASTALIFDTTSEIALATSVLYLVPGVPLINGVIDVVEGYVLTGFARLTEASLLIVSIA
HHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLSFTLLMVKNSLI
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]