| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346358
Identifier: 29346358
GI number: 29346358
Start: 1156970
End: 1157986
Strand: Reverse
Name: 29346358
Synonym: BT_0948
Alternate gene names: NA
Gene position: 1157986-1156970 (Counterclockwise)
Preceding gene: 29346359
Following gene: 29346357
Centisome position: 18.5
GC content: 38.15
Gene sequence:
>1017_bases ATGGAATCAACATTACAGATTATGCCAGTACAAAGAACTAGTAGAAACTTTGGTGAATATGCAGAAGAAGCGGTAATAAT TGAAGAGCCAATTATTAAGCAGAAACGACCTCTATTCATTGAAGCCAATACGATTGAAGCCAGTTTGGAACATCTAAGGA ATGATTGCATTATACCAGTATTCGCAAAGGACAATGAAGCTACATTATCTCATGTGGCTTTCATTGAAGCGGTACAGGAT GCAACCAATACATTCTTTAGCGGTGAACAAATTGAATCGCCAGATATTCGTGTTTCTCATGTAATCAAAGGTAGAATTCC CGAAGCAATACACAAACCTGCAAATCAGTTACTAGAGAGTGACAAGACTATCTACTACGAAAGGTGCGCTTTTGTTATTG AAGTTCCTACTATCTATGAGACAGTACACGGTAACAGGCTAACCCTTACTATTGGTGGTGTCAGAGCTTATAACCATACC AACCTTTATTCAAAGAAAGGTGCGGAGCGGTTTAAAGTGTTTATTGGCTTTACTTGTAAGGTTTGCACAAATCTATGTGT ATCTACAGACGGTTATCTTAGTTGCTTGGAAGTTACCAATACAAGGGATTTATATCAAGCGGTATTGGAAATGTTCCACA AATACGATGCAGCCAAACACATACATTTGATGCAGTCTTTAGGCAATACCAGTATGACGGAGCATCAGTTCTGCCAACTA CTTGGAAGAATGAGACTTTATCAGTCATTACCGCAAGGCTATCAGAAAGATATACCTAAAATGTTGCTTACTGATACACA GGTTAACAATGTGGCTAGGGCTTATATCAATGATGAGAACTTTGGTAGCTTGGGAAATGATTTGTCTATGTGGAAACTTT ACAACTTGCTCACAGGGGCAAATAAGAGTAGCTATATAGATTCATTCTTGGATAGAGCCTATAATGCTACAGAACTTGCA ACGGGTATATGTTCCGCTTTACATGGTGATAACAAATACCAATGGTTTCTTAGTTAA
Upstream 100 bases:
>100_bases CTTAATGCCACAGTTCTTTATTGGATTATTAATACTGATTGTGGCTTGCTTAGCTTTCAGACAGAGAAATTTCTAATATT AACTTAATAAATTACAGATT
Downstream 100 bases:
>100_bases TGGTATTTGAGAATACATAGGATTGTCAAATACTCAATATCTGAAACTATGAGGAGTTTGTTTTATCTACTTGCTGTGAT TGCTACGTTCTTTGTAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MESTLQIMPVQRTSRNFGEYAEEAVIIEEPIIKQKRPLFIEANTIEASLEHLRNDCIIPVFAKDNEATLSHVAFIEAVQD ATNTFFSGEQIESPDIRVSHVIKGRIPEAIHKPANQLLESDKTIYYERCAFVIEVPTIYETVHGNRLTLTIGGVRAYNHT NLYSKKGAERFKVFIGFTCKVCTNLCVSTDGYLSCLEVTNTRDLYQAVLEMFHKYDAAKHIHLMQSLGNTSMTEHQFCQL LGRMRLYQSLPQGYQKDIPKMLLTDTQVNNVARAYINDENFGSLGNDLSMWKLYNLLTGANKSSYIDSFLDRAYNATELA TGICSALHGDNKYQWFLS
Sequences:
>Translated_338_residues MESTLQIMPVQRTSRNFGEYAEEAVIIEEPIIKQKRPLFIEANTIEASLEHLRNDCIIPVFAKDNEATLSHVAFIEAVQD ATNTFFSGEQIESPDIRVSHVIKGRIPEAIHKPANQLLESDKTIYYERCAFVIEVPTIYETVHGNRLTLTIGGVRAYNHT NLYSKKGAERFKVFIGFTCKVCTNLCVSTDGYLSCLEVTNTRDLYQAVLEMFHKYDAAKHIHLMQSLGNTSMTEHQFCQL LGRMRLYQSLPQGYQKDIPKMLLTDTQVNNVARAYINDENFGSLGNDLSMWKLYNLLTGANKSSYIDSFLDRAYNATELA TGICSALHGDNKYQWFLS >Mature_338_residues MESTLQIMPVQRTSRNFGEYAEEAVIIEEPIIKQKRPLFIEANTIEASLEHLRNDCIIPVFAKDNEATLSHVAFIEAVQD ATNTFFSGEQIESPDIRVSHVIKGRIPEAIHKPANQLLESDKTIYYERCAFVIEVPTIYETVHGNRLTLTIGGVRAYNHT NLYSKKGAERFKVFIGFTCKVCTNLCVSTDGYLSCLEVTNTRDLYQAVLEMFHKYDAAKHIHLMQSLGNTSMTEHQFCQL LGRMRLYQSLPQGYQKDIPKMLLTDTQVNNVARAYINDENFGSLGNDLSMWKLYNLLTGANKSSYIDSFLDRAYNATELA TGICSALHGDNKYQWFLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38394; Mature: 38394
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTLQIMPVQRTSRNFGEYAEEAVIIEEPIIKQKRPLFIEANTIEASLEHLRNDCIIPV CCCCEEEEECHHHHHHHHHHHHCEEEECCCHHCCCCCEEEEECHHHHHHHHHCCCCEEEE FAKDNEATLSHVAFIEAVQDATNTFFSGEQIESPDIRVSHVIKGRIPEAIHKPANQLLES EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHC DKTIYYERCAFVIEVPTIYETVHGNRLTLTIGGVRAYNHTNLYSKKGAERFKVFIGFTCK CCEEEEEEEEEEEECCHHHHHHCCCEEEEEECCEEEECCCCCHHHCCHHHEEEEEEEHHH VCTNLCVSTDGYLSCLEVTNTRDLYQAVLEMFHKYDAAKHIHLMQSLGNTSMTEHQFCQL HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LGRMRLYQSLPQGYQKDIPKMLLTDTQVNNVARAYINDENFGSLGNDLSMWKLYNLLTGA HHHHHHHHHHCCHHHHHCHHHHHCCCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCC NKSSYIDSFLDRAYNATELATGICSALHGDNKYQWFLS CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MESTLQIMPVQRTSRNFGEYAEEAVIIEEPIIKQKRPLFIEANTIEASLEHLRNDCIIPV CCCCEEEEECHHHHHHHHHHHHCEEEECCCHHCCCCCEEEEECHHHHHHHHHCCCCEEEE FAKDNEATLSHVAFIEAVQDATNTFFSGEQIESPDIRVSHVIKGRIPEAIHKPANQLLES EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHC DKTIYYERCAFVIEVPTIYETVHGNRLTLTIGGVRAYNHTNLYSKKGAERFKVFIGFTCK CCEEEEEEEEEEEECCHHHHHHCCCEEEEEECCEEEECCCCCHHHCCHHHEEEEEEEHHH VCTNLCVSTDGYLSCLEVTNTRDLYQAVLEMFHKYDAAKHIHLMQSLGNTSMTEHQFCQL HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LGRMRLYQSLPQGYQKDIPKMLLTDTQVNNVARAYINDENFGSLGNDLSMWKLYNLLTGA HHHHHHHHHHCCHHHHHCHHHHHCCCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCC NKSSYIDSFLDRAYNATELATGICSALHGDNKYQWFLS CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA