Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346355

Identifier: 29346355

GI number: 29346355

Start: 1153770

End: 1154243

Strand: Reverse

Name: 29346355

Synonym: BT_0945

Alternate gene names: NA

Gene position: 1154243-1153770 (Counterclockwise)

Preceding gene: 29346357

Following gene: 29346354

Centisome position: 18.44

GC content: 32.49

Gene sequence:

>474_bases
ATGTATCGCAAATTAATGGTAACTTTAAAAGGAAGTGACATAATAATCAATCTGGAAGAGGGAAATGTAATAGACAGTGT
CATAACATCACGTTTCAGACATCCAGACTTTCTGCCACAACAAAATATATTAATTGGCATACCGCATACCAATACCCAAG
AATTTATAACAGATATTAGTCAGCAAGTTACTTTCTTAAATGAGAAGCAAGGAGATGTAACTGCCATGACTATTTTGGAT
GCAATATTTAATTCATGCCAAAAGCATATAAGGCAATATTATAGGCTTATAGATACGGATATGTACACCTATATTGATGC
CGCTATGCACATTATGGATGCTTGTCACTTCTTTAATGAGAAACAAATGCAAGAATATTATCAATTCTGTGCTTCCCAAA
CTATTAATAGATTTTCTTATGCCTTATGGCTTAATACTGGTGACGAATTAGTAAAATTAACTGATTTGAAGTAA

Upstream 100 bases:

>100_bases
GTAGTGTGGCATTACATATAATAGTCATACTTGTTATTGCAGGTTTCTTCTTATATGCCTACATAAAGAATAAATAGGAC
AAACATAAATAAATGGAATT

Downstream 100 bases:

>100_bases
CTATAATCGTAAATGAATGAGAGTATGAATCGTTTACAAACATTTATTATCAATTTCAAGCAGAAATGTTTGGAGCATGG
CGTTGAATATAAGCCAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MYRKLMVTLKGSDIIINLEEGNVIDSVITSRFRHPDFLPQQNILIGIPHTNTQEFITDISQQVTFLNEKQGDVTAMTILD
AIFNSCQKHIRQYYRLIDTDMYTYIDAAMHIMDACHFFNEKQMQEYYQFCASQTINRFSYALWLNTGDELVKLTDLK

Sequences:

>Translated_157_residues
MYRKLMVTLKGSDIIINLEEGNVIDSVITSRFRHPDFLPQQNILIGIPHTNTQEFITDISQQVTFLNEKQGDVTAMTILD
AIFNSCQKHIRQYYRLIDTDMYTYIDAAMHIMDACHFFNEKQMQEYYQFCASQTINRFSYALWLNTGDELVKLTDLK
>Mature_157_residues
MYRKLMVTLKGSDIIINLEEGNVIDSVITSRFRHPDFLPQQNILIGIPHTNTQEFITDISQQVTFLNEKQGDVTAMTILD
AIFNSCQKHIRQYYRLIDTDMYTYIDAAMHIMDACHFFNEKQMQEYYQFCASQTINRFSYALWLNTGDELVKLTDLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18419; Mature: 18419

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKLMVTLKGSDIIINLEEGNVIDSVITSRFRHPDFLPQQNILIGIPHTNTQEFITDIS
CCCEEEEEEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHH
QQVTFLNEKQGDVTAMTILDAIFNSCQKHIRQYYRLIDTDMYTYIDAAMHIMDACHFFNE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KQMQEYYQFCASQTINRFSYALWLNTGDELVKLTDLK
HHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MYRKLMVTLKGSDIIINLEEGNVIDSVITSRFRHPDFLPQQNILIGIPHTNTQEFITDIS
CCCEEEEEEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHH
QQVTFLNEKQGDVTAMTILDAIFNSCQKHIRQYYRLIDTDMYTYIDAAMHIMDACHFFNE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KQMQEYYQFCASQTINRFSYALWLNTGDELVKLTDLK
HHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA