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The map label for this gene is spoVD [H]

Identifier: 29346353

GI number: 29346353

Start: 1152317

End: 1153219

Strand: Reverse

Name: spoVD [H]

Synonym: BT_0943

Alternate gene names: 29346353

Gene position: 1153219-1152317 (Counterclockwise)

Preceding gene: 29346354

Following gene: 29346352

Centisome position: 18.42

GC content: 37.32

Gene sequence:

>903_bases
ATGGAAGTTCAATCAGGGCAAATAAAAGCTCTGGTTGGACTTACTAGGAAAGACAGTACGAACTACCAATCATGTGAGAA
CTTCTCTGTATGGCAGTCTACTGGTCTGATGCACCCAATATCGCTATTGGCAGCTTTAGAAACTGGTAAGGTGAAGTTGA
GTGATAAGGTTGATACTGGAAATGGTATCTACCAAATTCATGGCAGAGAGCTTAAAGACCATAATTGGCATAGAGGGGGA
TATGGTGAGCTTACAGTACAGGAAGGATTGGCAGCTAGTTCCAATATTGCTATTTATAAGACTATGGAGAAAGCATTTGC
TAATAATCCCCAAGCATACTTTGATTTATTAGCTAATATGAGCTATGGTAAACCGGATAGTATCAATGGAATAGCCAATC
TAAAGCCTGCACACTTTGTAACTCCTAAAGATAACAACTGGACTAAGACAGCCTTTGTATGGTCTAGTATCGGTTACAAT
CAACATGTATCGCCAATTCAAATACTAACCTTCTATAATGCTATCGCCAATAATGGGAAGATGATACAGCCTCAACTATA
TAAGGATAGTGTAGTAGTTATTAATCCCCAAATAGCTAGTAGGGCTAGTATTGATAGTTTGAAGAAAGCTCTAGTATTTA
ATATTACTGACGGATTAGGTCAACCTGCCAAGTCTGATAAGGTAGTAGTTGCAGGTATACAGGGAACTAGTTCGTTATCT
ACTAATGAGGATAGTACTAAGGATATGTATGCGGTAGAGTTCTGTGGTTACTTCCCTACTGATAATCCTAAGTATAGTAT
CATTGTATCTATTAATAAGGCTGGATTACCTGCAAGTGGTGGACTAATGACAGGTGATGTATTTAAGAAGATTATTGATA
ACATTATATCTTATAAAGAATAA

Upstream 100 bases:

>100_bases
ACCTATTTCCACCATAGACAGTACATTACAAACTAATGTTACTGCCATATTGGAAAGCAAGTTGTCAGAGATAAATGCCC
AATCTGGGCAGGTTATAGTA

Downstream 100 bases:

>100_bases
TCTGGAATAAGAAACATCCATTAAAGGTTACTAATTCATTGGTTACTAAAGAAGAAAGTACTCATATTCTATCGCAGAAC
TAAATGTAATCAGGGAAGTA

Product: penicillin-binding protein 2B

Products: NA

Alternate protein names: Sporulation-specific penicillin-binding protein [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEVQSGQIKALVGLTRKDSTNYQSCENFSVWQSTGLMHPISLLAALETGKVKLSDKVDTGNGIYQIHGRELKDHNWHRGG
YGELTVQEGLAASSNIAIYKTMEKAFANNPQAYFDLLANMSYGKPDSINGIANLKPAHFVTPKDNNWTKTAFVWSSIGYN
QHVSPIQILTFYNAIANNGKMIQPQLYKDSVVVINPQIASRASIDSLKKALVFNITDGLGQPAKSDKVVVAGIQGTSSLS
TNEDSTKDMYAVEFCGYFPTDNPKYSIIVSINKAGLPASGGLMTGDVFKKIIDNIISYKE

Sequences:

>Translated_300_residues
MEVQSGQIKALVGLTRKDSTNYQSCENFSVWQSTGLMHPISLLAALETGKVKLSDKVDTGNGIYQIHGRELKDHNWHRGG
YGELTVQEGLAASSNIAIYKTMEKAFANNPQAYFDLLANMSYGKPDSINGIANLKPAHFVTPKDNNWTKTAFVWSSIGYN
QHVSPIQILTFYNAIANNGKMIQPQLYKDSVVVINPQIASRASIDSLKKALVFNITDGLGQPAKSDKVVVAGIQGTSSLS
TNEDSTKDMYAVEFCGYFPTDNPKYSIIVSINKAGLPASGGLMTGDVFKKIIDNIISYKE
>Mature_300_residues
MEVQSGQIKALVGLTRKDSTNYQSCENFSVWQSTGLMHPISLLAALETGKVKLSDKVDTGNGIYQIHGRELKDHNWHRGG
YGELTVQEGLAASSNIAIYKTMEKAFANNPQAYFDLLANMSYGKPDSINGIANLKPAHFVTPKDNNWTKTAFVWSSIGYN
QHVSPIQILTFYNAIANNGKMIQPQLYKDSVVVINPQIASRASIDSLKKALVFNITDGLGQPAKSDKVVVAGIQGTSSLS
TNEDSTKDMYAVEFCGYFPTDNPKYSIIVSINKAGLPASGGLMTGDVFKKIIDNIISYKE

Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PASTA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005543
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR011927 [H]

Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 32770; Mature: 32770

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQSGQIKALVGLTRKDSTNYQSCENFSVWQSTGLMHPISLLAALETGKVKLSDKVDTG
CCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCC
NGIYQIHGRELKDHNWHRGGYGELTVQEGLAASSNIAIYKTMEKAFANNPQAYFDLLANM
CCEEEECCCCCCCCCCCCCCCCEEEHHCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHCC
SYGKPDSINGIANLKPAHFVTPKDNNWTKTAFVWSSIGYNQHVSPIQILTFYNAIANNGK
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
MIQPQLYKDSVVVINPQIASRASIDSLKKALVFNITDGLGQPAKSDKVVVAGIQGTSSLS
EECCEECCCCEEEECCCHHCHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECCCCCCCC
TNEDSTKDMYAVEFCGYFPTDNPKYSIIVSINKAGLPASGGLMTGDVFKKIIDNIISYKE
CCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEVQSGQIKALVGLTRKDSTNYQSCENFSVWQSTGLMHPISLLAALETGKVKLSDKVDTG
CCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCC
NGIYQIHGRELKDHNWHRGGYGELTVQEGLAASSNIAIYKTMEKAFANNPQAYFDLLANM
CCEEEECCCCCCCCCCCCCCCCEEEHHCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHCC
SYGKPDSINGIANLKPAHFVTPKDNNWTKTAFVWSSIGYNQHVSPIQILTFYNAIANNGK
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
MIQPQLYKDSVVVINPQIASRASIDSLKKALVFNITDGLGQPAKSDKVVVAGIQGTSSLS
EECCEECCCCEEEECCCHHCHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECCCCCCCC
TNEDSTKDMYAVEFCGYFPTDNPKYSIIVSINKAGLPASGGLMTGDVFKKIIDNIISYKE
CCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8289242; 9384377; 8244929; 8436954 [H]