Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346350

Identifier: 29346350

GI number: 29346350

Start: 1149936

End: 1150400

Strand: Reverse

Name: 29346350

Synonym: BT_0940

Alternate gene names: NA

Gene position: 1150400-1149936 (Counterclockwise)

Preceding gene: 29346351

Following gene: 29346349

Centisome position: 18.38

GC content: 31.4

Gene sequence:

>465_bases
ATGGATTTAATGGAAGAAATGTGGATAAGCAGACCACAAAGAAGAATGACTAAACTGTCTGATTTATCAGACGGAAGTAT
TGCACGTATAAAGTTCTATAATGCGAATAAGGAATATACTGTAGATAGCTTTAAAATAATGTTTGCTGAATATCAGAAGT
CTATATACTGCAATCAAGAAGTTATAGGAGTATGCCATTCTATTAGTGATTATAGCTACATAGTAGATTATATTAATAAT
TCCCATTTCAGAAACGAATTAGATATATTTACTCCAGAATTTGATAAGAAGCGTACTCACCACATAACATCTCATAAATC
AGACAAAGACACGTTACAAGTGAGAGTAATTTCTAATGAAGGAGTTATTAAGAGCTATGATATGTCTGCGATAGAAATTA
CATTTGAGAAGATGTATCACATTATAGATAAGGAACGTAATGGTTATCGAAGTGGTCAACTATGA

Upstream 100 bases:

>100_bases
AGACCCTAAAGCATTTATTGACAAGTTGGACAATCAGGCAGCAAAGCTTATGCTAGCATTCTATATGGGATTATAATACA
TTAAATCGGAGGAACAATTT

Downstream 100 bases:

>100_bases
TTGGCACTCCGGTAATTTTAAATAAAACCAATGATTATGTTACTAAAGACACTGAATAGGACATTAGAAGAATATAATAT
TCCCAAAGAGGAGTTTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDLMEEMWISRPQRRMTKLSDLSDGSIARIKFYNANKEYTVDSFKIMFAEYQKSIYCNQEVIGVCHSISDYSYIVDYINN
SHFRNELDIFTPEFDKKRTHHITSHKSDKDTLQVRVISNEGVIKSYDMSAIEITFEKMYHIIDKERNGYRSGQL

Sequences:

>Translated_154_residues
MDLMEEMWISRPQRRMTKLSDLSDGSIARIKFYNANKEYTVDSFKIMFAEYQKSIYCNQEVIGVCHSISDYSYIVDYINN
SHFRNELDIFTPEFDKKRTHHITSHKSDKDTLQVRVISNEGVIKSYDMSAIEITFEKMYHIIDKERNGYRSGQL
>Mature_154_residues
MDLMEEMWISRPQRRMTKLSDLSDGSIARIKFYNANKEYTVDSFKIMFAEYQKSIYCNQEVIGVCHSISDYSYIVDYINN
SHFRNELDIFTPEFDKKRTHHITSHKSDKDTLQVRVISNEGVIKSYDMSAIEITFEKMYHIIDKERNGYRSGQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18274; Mature: 18274

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLMEEMWISRPQRRMTKLSDLSDGSIARIKFYNANKEYTVDSFKIMFAEYQKSIYCNQE
CCHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCHH
VIGVCHSISDYSYIVDYINNSHFRNELDIFTPEFDKKRTHHITSHKSDKDTLQVRVISNE
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCC
GVIKSYDMSAIEITFEKMYHIIDKERNGYRSGQL
CEEEECCCHHEEHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDLMEEMWISRPQRRMTKLSDLSDGSIARIKFYNANKEYTVDSFKIMFAEYQKSIYCNQE
CCHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCHH
VIGVCHSISDYSYIVDYINNSHFRNELDIFTPEFDKKRTHHITSHKSDKDTLQVRVISNE
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCC
GVIKSYDMSAIEITFEKMYHIIDKERNGYRSGQL
CEEEECCCHHEEHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA