| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346314
Identifier: 29346314
GI number: 29346314
Start: 1114298
End: 1116124
Strand: Reverse
Name: 29346314
Synonym: BT_0904
Alternate gene names: NA
Gene position: 1116124-1114298 (Counterclockwise)
Preceding gene: 29346315
Following gene: 29346313
Centisome position: 17.83
GC content: 39.52
Gene sequence:
>1827_bases ATGAAAAAACTGATTGTTATATTGATGGCATTGATAGCATATAGCACCCAAGCGCTTGCCGACAAGGTGTCATTCACTGC TTCCGCTCCCGATGTAGTGGTTGTAGGGGATCAATTCAGGCTATCTTATACAGTAACCACACAAAAAGTTAAAGACTTTC AGGCACCGGCTATCAAAGGATTCGACGTCCTGATGGGGCCAAGCCGTTCTCAGCAAAGTAGTACACAGATAATGAATGGT AATGTCACCTCTACAAGTAGTATTACATTCACTTATATATTGATGGCAAATACTGCCGGTGAATATACAATCCCCGGAGC TTCTATTGTAGCTGATGGCAACCAGATGGTTTCAAACTCCGTAAAGGTGAAGGTTTTGCCACAAGACCAAGCTAGTAATG GAGGACAAAATGACGGTAGCTCATCTGCACGCTCTTCATCCGGTACAAGTGTATCTAACCAGGATTTGTTTATCACAGCA ACTGCCAGTAAAACGAATGTATACGAGCAGGAAGCATTTGTCTTAACCTATAAAATATACACCAGAGAACATGACTTGCA ATTGAATAATGCCAAACTGCCTGACTTTAAAGGATTTCATTCTCAAGAAATTGAAATGAATGCAAATGCAAGATGGACAC AGGAGCATTATAAAGGACGTAACTATAATACGACAATCTATCGCCAATTCGTATTATTTCCCCAGCAACCAGGTAAGTTA TTTATAGAACCGGCACAGTTCCAGATGACGGTAGGTAAAGCTGTACAATCTGACGATCCTTTTGATGCATTTTTCAATGG TGGAAGCAATGTAGTTAAAGTACCGAAATCTATCGTTACTCCTAAAATAGCAATTAATGTCAATCCGCTTCCTGCTGGTA AACCTGCAAACTTTTCAGGTGGAGTGGGAGAGTTCAACATTTCTTCTTCCATTAATAGCAAGGAGCTGAAAACTAATGAT GCTATCACCATTAAGTTGGTAATCTCCGGCACCGGAAACCTAAAGCTGATTTCTAATCCAGAAATTAAGTTCCCGGATGA CTTTGAAGTATATGATCCGAAGGTGGACAACCAAGTCAGATTAACTCAGGAAGGTCTTACAGGAAACAAAGTCATTGAAT ATCTGGCTATTCCAAGACATGCAGGCAATTATAAAATCCCGGGGGCATCTTTCAGCTATTTCGATATCCGTTCAAAATCT TACAAAACGTTGAAAACGGAAGACTACGTAATCAATGTTGAGAAAGGTGCAGGAAATGCTGATCAGGTGATTGCCAATTT CACCAATAAAGAAGACTTGAAAGTATTGGGTGAAGATATCCGTTACATTAAGCAAAATGAAGTTACTCTCCAACCTAAGG GTAGTTTCTTCTATGGCTCAATGACCTATTGGCTATTCTATATCATTCCTGCTTTAGCCTTCATCATCTTCTTTATCATC TACCGCAAACAAGCCGCTACAAATGCCAATGTTGCTAAGATGAAAACAAAGAAAGCTAATAAGGTAGCAACCAAGCGCAT GAAACTAGCCGGTAAGTTGCTCTCTGAAAACAAGAAAGATGCCTTCTATGATGAAGTACTGAAAGCATTGTGGGGATATA TCAGCGACAAACTCAGTATTCCGGTTTCCCGTTTGTCGAAAGACAATATTGAAGAGAAGCTGAGAAACCATGGAGTAAGT GAAGAACTAATTAAAGAATTCCTGAATGCATTGAATGATTGTGAATTTGCTCGTTTCGCTCCAGGTGATGAAAATCAGGC AATGGATAAAGTCTACTCTTCTTCAATAGAAGTGATAAGCAGAATGGAAAATTCAATAAAACATTAA
Upstream 100 bases:
>100_bases GTACAGGACAAAGTGAAGAAACAACAGAAAGTTATTCAGGGCGGTCGTCTGGAAAAAGATTGGTAATAATAAAAAGTTGA TGATATAAATTTCATAAGCA
Downstream 100 bases:
>100_bases CCCAGAAGAGATTGTGTCATGAAAAAAATATTGTTTTTTATATTATTATCAATGTCAGTTACTTGCTTCGGACAGGGAAC TCAGAGCATTGATTCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Aerotolerance-Related Exported Protein; Aerotolerance-Related Protein BatD; Aerotolerance-Related Cytoplasmic Membrane Protein BatD; TPR Repeat-Containing Protein; Aerotolerance-Like Exported Protein; BatD/BatE Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MKKLIVILMALIAYSTQALADKVSFTASAPDVVVVGDQFRLSYTVTTQKVKDFQAPAIKGFDVLMGPSRSQQSSTQIMNG NVTSTSSITFTYILMANTAGEYTIPGASIVADGNQMVSNSVKVKVLPQDQASNGGQNDGSSSARSSSGTSVSNQDLFITA TASKTNVYEQEAFVLTYKIYTREHDLQLNNAKLPDFKGFHSQEIEMNANARWTQEHYKGRNYNTTIYRQFVLFPQQPGKL FIEPAQFQMTVGKAVQSDDPFDAFFNGGSNVVKVPKSIVTPKIAINVNPLPAGKPANFSGGVGEFNISSSINSKELKTND AITIKLVISGTGNLKLISNPEIKFPDDFEVYDPKVDNQVRLTQEGLTGNKVIEYLAIPRHAGNYKIPGASFSYFDIRSKS YKTLKTEDYVINVEKGAGNADQVIANFTNKEDLKVLGEDIRYIKQNEVTLQPKGSFFYGSMTYWLFYIIPALAFIIFFII YRKQAATNANVAKMKTKKANKVATKRMKLAGKLLSENKKDAFYDEVLKALWGYISDKLSIPVSRLSKDNIEEKLRNHGVS EELIKEFLNALNDCEFARFAPGDENQAMDKVYSSSIEVISRMENSIKH
Sequences:
>Translated_608_residues MKKLIVILMALIAYSTQALADKVSFTASAPDVVVVGDQFRLSYTVTTQKVKDFQAPAIKGFDVLMGPSRSQQSSTQIMNG NVTSTSSITFTYILMANTAGEYTIPGASIVADGNQMVSNSVKVKVLPQDQASNGGQNDGSSSARSSSGTSVSNQDLFITA TASKTNVYEQEAFVLTYKIYTREHDLQLNNAKLPDFKGFHSQEIEMNANARWTQEHYKGRNYNTTIYRQFVLFPQQPGKL FIEPAQFQMTVGKAVQSDDPFDAFFNGGSNVVKVPKSIVTPKIAINVNPLPAGKPANFSGGVGEFNISSSINSKELKTND AITIKLVISGTGNLKLISNPEIKFPDDFEVYDPKVDNQVRLTQEGLTGNKVIEYLAIPRHAGNYKIPGASFSYFDIRSKS YKTLKTEDYVINVEKGAGNADQVIANFTNKEDLKVLGEDIRYIKQNEVTLQPKGSFFYGSMTYWLFYIIPALAFIIFFII YRKQAATNANVAKMKTKKANKVATKRMKLAGKLLSENKKDAFYDEVLKALWGYISDKLSIPVSRLSKDNIEEKLRNHGVS EELIKEFLNALNDCEFARFAPGDENQAMDKVYSSSIEVISRMENSIKH >Mature_608_residues MKKLIVILMALIAYSTQALADKVSFTASAPDVVVVGDQFRLSYTVTTQKVKDFQAPAIKGFDVLMGPSRSQQSSTQIMNG NVTSTSSITFTYILMANTAGEYTIPGASIVADGNQMVSNSVKVKVLPQDQASNGGQNDGSSSARSSSGTSVSNQDLFITA TASKTNVYEQEAFVLTYKIYTREHDLQLNNAKLPDFKGFHSQEIEMNANARWTQEHYKGRNYNTTIYRQFVLFPQQPGKL FIEPAQFQMTVGKAVQSDDPFDAFFNGGSNVVKVPKSIVTPKIAINVNPLPAGKPANFSGGVGEFNISSSINSKELKTND AITIKLVISGTGNLKLISNPEIKFPDDFEVYDPKVDNQVRLTQEGLTGNKVIEYLAIPRHAGNYKIPGASFSYFDIRSKS YKTLKTEDYVINVEKGAGNADQVIANFTNKEDLKVLGEDIRYIKQNEVTLQPKGSFFYGSMTYWLFYIIPALAFIIFFII YRKQAATNANVAKMKTKKANKVATKRMKLAGKLLSENKKDAFYDEVLKALWGYISDKLSIPVSRLSKDNIEEKLRNHGVS EELIKEFLNALNDCEFARFAPGDENQAMDKVYSSSIEVISRMENSIKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67438; Mature: 67438
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIVILMALIAYSTQALADKVSFTASAPDVVVVGDQFRLSYTVTTQKVKDFQAPAIKG CHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCEEEEEEEEHHHHHHCCCCCCCC FDVLMGPSRSQQSSTQIMNGNVTSTSSITFTYILMANTAGEYTIPGASIVADGNQMVSNS CEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCEECCCCEEEECCCHHHCCC VKVKVLPQDQASNGGQNDGSSSARSSSGTSVSNQDLFITATASKTNVYEQEAFVLTYKIY EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEE TREHDLQLNNAKLPDFKGFHSQEIEMNANARWTQEHYKGRNYNTTIYRQFVLFPQQPGKL ECCCCCEECCCCCCCCCCCCCCEEEECCCCEECHHHHCCCCCCCEEEEEEEEECCCCCCE FIEPAQFQMTVGKAVQSDDPFDAFFNGGSNVVKVPKSIVTPKIAINVNPLPAGKPANFSG EEECCCEEEEHHHHHCCCCCHHHHHCCCCCEEECCHHHCCCEEEEEECCCCCCCCCCCCC GVGEFNISSSINSKELKTNDAITIKLVISGTGNLKLISNPEIKFPDDFEVYDPKVDNQVR CCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEE LTQEGLTGNKVIEYLAIPRHAGNYKIPGASFSYFDIRSKSYKTLKTEDYVINVEKGAGNA EEECCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCEEECCCEEEEEECCCCCH DQVIANFTNKEDLKVLGEDIRYIKQNEVTLQPKGSFFYGSMTYWLFYIIPALAFIIFFII HHHHEECCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHH YRKQAATNANVAKMKTKKANKVATKRMKLAGKLLSENKKDAFYDEVLKALWGYISDKLSI HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC PVSRLSKDNIEEKLRNHGVSEELIKEFLNALNDCEFARFAPGDENQAMDKVYSSSIEVIS CHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH RMENSIKH HHHHHHCC >Mature Secondary Structure MKKLIVILMALIAYSTQALADKVSFTASAPDVVVVGDQFRLSYTVTTQKVKDFQAPAIKG CHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCEEEEEEEEHHHHHHCCCCCCCC FDVLMGPSRSQQSSTQIMNGNVTSTSSITFTYILMANTAGEYTIPGASIVADGNQMVSNS CEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCEECCCCEEEECCCHHHCCC VKVKVLPQDQASNGGQNDGSSSARSSSGTSVSNQDLFITATASKTNVYEQEAFVLTYKIY EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEE TREHDLQLNNAKLPDFKGFHSQEIEMNANARWTQEHYKGRNYNTTIYRQFVLFPQQPGKL ECCCCCEECCCCCCCCCCCCCCEEEECCCCEECHHHHCCCCCCCEEEEEEEEECCCCCCE FIEPAQFQMTVGKAVQSDDPFDAFFNGGSNVVKVPKSIVTPKIAINVNPLPAGKPANFSG EEECCCEEEEHHHHHCCCCCHHHHHCCCCCEEECCHHHCCCEEEEEECCCCCCCCCCCCC GVGEFNISSSINSKELKTNDAITIKLVISGTGNLKLISNPEIKFPDDFEVYDPKVDNQVR CCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEE LTQEGLTGNKVIEYLAIPRHAGNYKIPGASFSYFDIRSKSYKTLKTEDYVINVEKGAGNA EEECCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCEEECCCEEEEEECCCCCH DQVIANFTNKEDLKVLGEDIRYIKQNEVTLQPKGSFFYGSMTYWLFYIIPALAFIIFFII HHHHEECCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHH YRKQAATNANVAKMKTKKANKVATKRMKLAGKLLSENKKDAFYDEVLKALWGYISDKLSI HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC PVSRLSKDNIEEKLRNHGVSEELIKEFLNALNDCEFARFAPGDENQAMDKVYSSSIEVIS CHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH RMENSIKH HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA