Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346251

Identifier: 29346251

GI number: 29346251

Start: 1036185

End: 1036886

Strand: Reverse

Name: 29346251

Synonym: BT_0841

Alternate gene names: NA

Gene position: 1036886-1036185 (Counterclockwise)

Preceding gene: 29346252

Following gene: 29346250

Centisome position: 16.56

GC content: 29.49

Gene sequence:

>702_bases
ATGGAAGCTGATTGGCTAGGCATATTAGTCGGTATCCTTGCATTGTCTACTACTATATTGCTTGGATGGCAAATCATTAG
TTATATAGGATTTAAAGATGAAGTTAAAAAGGAGATGGAAAAGACTAAAGCAGAACTCAAAGAAACAACGGATAACATAG
ATAATATGATTCAACAAAAGATAAATGAAACTCAAAATATTATCTACAAAAAGAATGAATTATATATACAAGGAAGCATA
GCTTACTTAGAAGCTTATGCTAAAATTCTTAAAGACGACGCAACGTCTGACAATTACAGTTTCGCTTATGGAAGTTTAGT
TAACTCTCTTAATTGTTATTGTAAATATGGTTGCGCCGCTGAAGTAAATATAGATAAGTGTTTATCGGCATTAAAACGTA
TAATTTCAGATTTCGACAATTTACAGAAACAAAGACATGGAGACAATCCTTTCAATCAATATATACAAAAGAATTTTTCT
GATTTAGAATTCTCTAGAGATAATTTATTTGCAAAATTAAAAGCGGGAATTTTAGAGTCGAATAAGACCGGCATCCCTCA
AAAATACATAGATGAATTCCTTGAAATTGAAGAAGAAAGAAAAAGAATAATAGAACAAAATAAATTAAGTATTGCCAAGT
GGGAAACAAAAATGAAATTAGATAATCAAAACAAGAATAAAGCTCCTGATAATAAAGAATAA

Upstream 100 bases:

>100_bases
GTGAGAGAAGATGAAAAATAAAATATCCATTTGGCTATCATCAATTGCCTTATTTTTCGCTTTACTGGCTGCAGGATTTA
CATTTTTTAGAACCACTCCG

Downstream 100 bases:

>100_bases
ATATTATTGATTGAACAATTAAATAGTTTAAATATGTCTTTAATAGTAACTGCATATACACAGGAAGGTATTGTAATAGG
TGCCGATAGTTGTATTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEADWLGILVGILALSTTILLGWQIISYIGFKDEVKKEMEKTKAELKETTDNIDNMIQQKINETQNIIYKKNELYIQGSI
AYLEAYAKILKDDATSDNYSFAYGSLVNSLNCYCKYGCAAEVNIDKCLSALKRIISDFDNLQKQRHGDNPFNQYIQKNFS
DLEFSRDNLFAKLKAGILESNKTGIPQKYIDEFLEIEEERKRIIEQNKLSIAKWETKMKLDNQNKNKAPDNKE

Sequences:

>Translated_233_residues
MEADWLGILVGILALSTTILLGWQIISYIGFKDEVKKEMEKTKAELKETTDNIDNMIQQKINETQNIIYKKNELYIQGSI
AYLEAYAKILKDDATSDNYSFAYGSLVNSLNCYCKYGCAAEVNIDKCLSALKRIISDFDNLQKQRHGDNPFNQYIQKNFS
DLEFSRDNLFAKLKAGILESNKTGIPQKYIDEFLEIEEERKRIIEQNKLSIAKWETKMKLDNQNKNKAPDNKE
>Mature_233_residues
MEADWLGILVGILALSTTILLGWQIISYIGFKDEVKKEMEKTKAELKETTDNIDNMIQQKINETQNIIYKKNELYIQGSI
AYLEAYAKILKDDATSDNYSFAYGSLVNSLNCYCKYGCAAEVNIDKCLSALKRIISDFDNLQKQRHGDNPFNQYIQKNFS
DLEFSRDNLFAKLKAGILESNKTGIPQKYIDEFLEIEEERKRIIEQNKLSIAKWETKMKLDNQNKNKAPDNKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26922; Mature: 26922

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEADWLGILVGILALSTTILLGWQIISYIGFKDEVKKEMEKTKAELKETTDNIDNMIQQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INETQNIIYKKNELYIQGSIAYLEAYAKILKDDATSDNYSFAYGSLVNSLNCYCKYGCAA
HHHHHHHEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
EVNIDKCLSALKRIISDFDNLQKQRHGDNPFNQYIQKNFSDLEFSRDNLFAKLKAGILES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
NKTGIPQKYIDEFLEIEEERKRIIEQNKLSIAKWETKMKLDNQNKNKAPDNKE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEADWLGILVGILALSTTILLGWQIISYIGFKDEVKKEMEKTKAELKETTDNIDNMIQQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INETQNIIYKKNELYIQGSIAYLEAYAKILKDDATSDNYSFAYGSLVNSLNCYCKYGCAA
HHHHHHHEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
EVNIDKCLSALKRIISDFDNLQKQRHGDNPFNQYIQKNFSDLEFSRDNLFAKLKAGILES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
NKTGIPQKYIDEFLEIEEERKRIIEQNKLSIAKWETKMKLDNQNKNKAPDNKE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA