| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346188
Identifier: 29346188
GI number: 29346188
Start: 969603
End: 970490
Strand: Reverse
Name: 29346188
Synonym: BT_0778
Alternate gene names: NA
Gene position: 970490-969603 (Counterclockwise)
Preceding gene: 29346190
Following gene: 29346187
Centisome position: 15.5
GC content: 43.69
Gene sequence:
>888_bases ATGAAAAAAGAAGTCTTAAAAGAGCTTACAGCCAAACCGGGGAAGGAACATCATGTATCCGATTTCAATCCCTCATTTAC TGCTGATATGTCCAAACAGGATGCCAAAGAACAGTTAGCCCAAAATATCGAAAAGCTGTCAGAACTGCAAAGTATGCTTT ATGCACAAGACCGCTACTCGGTTCTGGTTATTTTTCAGGCAATGGATGCTGCCGGAAAAGACGGAACGATCAAGCATGTA ATGTCCGGCATCAATCCGCAAGGGTGTCAGGTGTACTCCTTTAAGCAACCTTCTGCCGAAGAACTGGATCATGACTACTT ATGGAGAATTAATCGTTCGCTCCCCGAACGGGGACGAATCGGAATCTTCAACCGTTCCCAATATGAAGATGTACTGATAG CCAAAGTGCATCCCGAAATCCTGTTATCCAACAAGCTACCCGGAATACTAAAAGCGAAAGATATAGACAACGAATTTTGG AAACGCCGCTACCGGCAGATTAATGATTTCGAACGTTATCTGACTGAAAACGGGACGGTCATCATCAAATTCTTCCTGAA CGTTTCAAAAGCCGAACAAAAGAAACGATTCATGGAGAGGCTGAACGATGAATCAAAGAACTGGAAATTCTCTTCTGCCG ACGTCAAGGAACGGCAATACTGGGACGACTACATGAAAGCCTACTCGGATGTACTGACAGAAACTTCAACAGAGATTGCC CCGTGGTATGTGATTCCGGCAGACAACAAATGGTTCATGCGATATGCCGTCGGGCAAATTATCTGTGAACGCATGGAAAA ACTGGACTTACATTATCCACAGTTATCCAAGGAGGCGCTGGAAAGACTTGAAGAATGCAAGAAAAACGTATCCGATATTA ATTTCTAA
Upstream 100 bases:
>100_bases GATACATAATTGGGGAATTACTATTCAACGCTCTTAATTTGGCAAGAACTGATTTCTTTATTCAACTGTTATATACCTAT AACAACCTAATTATACAACA
Downstream 100 bases:
>100_bases ACAGGATACTTTCTCAGAGTTTAACGGGTTATTTCTGTCAGGACTTGACAAAGCCCTTTTAATGTTGTATATTTGTAAGC AGAACAATAATAAACCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYSVLVIFQAMDAAGKDGTIKHV MSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRIGIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFW KRRYRQINDFERYLTENGTVIIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF
Sequences:
>Translated_295_residues MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYSVLVIFQAMDAAGKDGTIKHV MSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRIGIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFW KRRYRQINDFERYLTENGTVIIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF >Mature_295_residues MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYSVLVIFQAMDAAGKDGTIKHV MSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRIGIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFW KRRYRQINDFERYLTENGTVIIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 34716; Mature: 34716
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYS CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VLVIFQAMDAAGKDGTIKHVMSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRI EEEEEEHHCCCCCCCCHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHHHCCCCCCCCCE GIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFWKRRYRQINDFERYLTENGTV ECCCCCCHHCEEEEECCHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCE IIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA EEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYS CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VLVIFQAMDAAGKDGTIKHVMSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRI EEEEEEHHCCCCCCCCHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHHHCCCCCCCCCE GIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFWKRRYRQINDFERYLTENGTV ECCCCCCHHCEEEEECCHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCE IIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA EEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]