Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346188

Identifier: 29346188

GI number: 29346188

Start: 969603

End: 970490

Strand: Reverse

Name: 29346188

Synonym: BT_0778

Alternate gene names: NA

Gene position: 970490-969603 (Counterclockwise)

Preceding gene: 29346190

Following gene: 29346187

Centisome position: 15.5

GC content: 43.69

Gene sequence:

>888_bases
ATGAAAAAAGAAGTCTTAAAAGAGCTTACAGCCAAACCGGGGAAGGAACATCATGTATCCGATTTCAATCCCTCATTTAC
TGCTGATATGTCCAAACAGGATGCCAAAGAACAGTTAGCCCAAAATATCGAAAAGCTGTCAGAACTGCAAAGTATGCTTT
ATGCACAAGACCGCTACTCGGTTCTGGTTATTTTTCAGGCAATGGATGCTGCCGGAAAAGACGGAACGATCAAGCATGTA
ATGTCCGGCATCAATCCGCAAGGGTGTCAGGTGTACTCCTTTAAGCAACCTTCTGCCGAAGAACTGGATCATGACTACTT
ATGGAGAATTAATCGTTCGCTCCCCGAACGGGGACGAATCGGAATCTTCAACCGTTCCCAATATGAAGATGTACTGATAG
CCAAAGTGCATCCCGAAATCCTGTTATCCAACAAGCTACCCGGAATACTAAAAGCGAAAGATATAGACAACGAATTTTGG
AAACGCCGCTACCGGCAGATTAATGATTTCGAACGTTATCTGACTGAAAACGGGACGGTCATCATCAAATTCTTCCTGAA
CGTTTCAAAAGCCGAACAAAAGAAACGATTCATGGAGAGGCTGAACGATGAATCAAAGAACTGGAAATTCTCTTCTGCCG
ACGTCAAGGAACGGCAATACTGGGACGACTACATGAAAGCCTACTCGGATGTACTGACAGAAACTTCAACAGAGATTGCC
CCGTGGTATGTGATTCCGGCAGACAACAAATGGTTCATGCGATATGCCGTCGGGCAAATTATCTGTGAACGCATGGAAAA
ACTGGACTTACATTATCCACAGTTATCCAAGGAGGCGCTGGAAAGACTTGAAGAATGCAAGAAAAACGTATCCGATATTA
ATTTCTAA

Upstream 100 bases:

>100_bases
GATACATAATTGGGGAATTACTATTCAACGCTCTTAATTTGGCAAGAACTGATTTCTTTATTCAACTGTTATATACCTAT
AACAACCTAATTATACAACA

Downstream 100 bases:

>100_bases
ACAGGATACTTTCTCAGAGTTTAACGGGTTATTTCTGTCAGGACTTGACAAAGCCCTTTTAATGTTGTATATTTGTAAGC
AGAACAATAATAAACCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYSVLVIFQAMDAAGKDGTIKHV
MSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRIGIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFW
KRRYRQINDFERYLTENGTVIIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA
PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF

Sequences:

>Translated_295_residues
MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYSVLVIFQAMDAAGKDGTIKHV
MSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRIGIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFW
KRRYRQINDFERYLTENGTVIIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA
PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF
>Mature_295_residues
MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYSVLVIFQAMDAAGKDGTIKHV
MSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRIGIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFW
KRRYRQINDFERYLTENGTVIIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA
PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 34716; Mature: 34716

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYS
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VLVIFQAMDAAGKDGTIKHVMSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRI
EEEEEEHHCCCCCCCCHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHHHCCCCCCCCCE
GIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFWKRRYRQINDFERYLTENGTV
ECCCCCCHHCEEEEECCHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCE
IIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA
EEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF
CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKEVLKELTAKPGKEHHVSDFNPSFTADMSKQDAKEQLAQNIEKLSELQSMLYAQDRYS
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VLVIFQAMDAAGKDGTIKHVMSGINPQGCQVYSFKQPSAEELDHDYLWRINRSLPERGRI
EEEEEEHHCCCCCCCCHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHHHCCCCCCCCCE
GIFNRSQYEDVLIAKVHPEILLSNKLPGILKAKDIDNEFWKRRYRQINDFERYLTENGTV
ECCCCCCHHCEEEEECCHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCE
IIKFFLNVSKAEQKKRFMERLNDESKNWKFSSADVKERQYWDDYMKAYSDVLTETSTEIA
EEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PWYVIPADNKWFMRYAVGQIICERMEKLDLHYPQLSKEALERLEECKKNVSDINF
CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]