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The map label for this gene is ybjE [H]

Identifier: 29346132

GI number: 29346132

Start: 897605

End: 898225

Strand: Reverse

Name: ybjE [H]

Synonym: BT_0722

Alternate gene names: 29346132

Gene position: 898225-897605 (Counterclockwise)

Preceding gene: 29346133

Following gene: 29346120

Centisome position: 14.35

GC content: 42.19

Gene sequence:

>621_bases
ATGAAAGGAAGTCTCATCGTTATCGTATTTTTCTGTGTAGGCTGTATCATGGGAGTTTTTAATAAATTCCAGTTCGACAC
ACATACTGTTTCCATGTATATACTATATGCGTTGATGCTGCAAGTAGGAATCAGCATCGGTTCCAATAAGAACCTGAAAG
CGATCATCTCACATTTGCACCCGAAAATGCTGCTGATTCCATTGGGTACCATTACCGGCACATTGTTGTTTTCTGCCTTG
GCAAGCATTTTGCTAAGTCAATGGAGTGTATTCGACTGTATGGCAGTAGGAAGCGGATTCGCCTATTATTCGCTGTCTTC
CATCCTGATCACTCAGTTCAAGGAACCGACCATCGGAATACAGTTGGCTACAGAGCTGGGTACCATTGCCCTGCTGACTA
ATATCTTTCGCGAAATGATGGCACTTTTGGGTACACCGCTTATCAAGAAGTATTTCGGGAAACTTGCTCCCATTTCAGCG
GCAGGAGTCAACTCAATGGATGTATTATTACCTTCCATCAGCAGATATTCGGGAAAAGAAATGATTCCTATCGCTATTTT
GCATGGTATTCTGATCGATATCAGCGTGCCTGTATTCGTTTCTTTCTTCTGTAACTTATAA

Upstream 100 bases:

>100_bases
TTGGATGGCAGGCGATCATTCTTGCCGTATCCGGCGTATTAGGGAGCTTGTTGGCTGCCCGGCTTGTGTTACAACTATTT
TTCAAGAAAGGAGGTAAACA

Downstream 100 bases:

>100_bases
CTCTGTACCCCATCATACCATAATGTCCGAAAAGCATATCTGACCTATCATTCTGTCAGTAGCTTTTCGGACATTATTTT
TTTATTAAAATGAGTTTTTT

Product: putative surface protein, function unknown

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKGSLIVIVFFCVGCIMGVFNKFQFDTHTVSMYILYALMLQVGISIGSNKNLKAIISHLHPKMLLIPLGTITGTLLFSAL
ASILLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPTIGIQLATELGTIALLTNIFREMMALLGTPLIKKYFGKLAPISA
AGVNSMDVLLPSISRYSGKEMIPIAILHGILIDISVPVFVSFFCNL

Sequences:

>Translated_206_residues
MKGSLIVIVFFCVGCIMGVFNKFQFDTHTVSMYILYALMLQVGISIGSNKNLKAIISHLHPKMLLIPLGTITGTLLFSAL
ASILLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPTIGIQLATELGTIALLTNIFREMMALLGTPLIKKYFGKLAPISA
AGVNSMDVLLPSISRYSGKEMIPIAILHGILIDISVPVFVSFFCNL
>Mature_206_residues
MKGSLIVIVFFCVGCIMGVFNKFQFDTHTVSMYILYALMLQVGISIGSNKNLKAIISHLHPKMLLIPLGTITGTLLFSAL
ASILLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPTIGIQLATELGTIALLTNIFREMMALLGTPLIKKYFGKLAPISA
AGVNSMDVLLPSISRYSGKEMIPIAILHGILIDISVPVFVSFFCNL

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=202, Percent_Identity=28.7128712871287, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 22393; Mature: 22393

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSLIVIVFFCVGCIMGVFNKFQFDTHTVSMYILYALMLQVGISIGSNKNLKAIISHLH
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
PKMLLIPLGTITGTLLFSALASILLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPTIGI
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCE
QLATELGTIALLTNIFREMMALLGTPLIKKYFGKLAPISAAGVNSMDVLLPSISRYSGKE
EEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
MIPIAILHGILIDISVPVFVSFFCNL
CHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSLIVIVFFCVGCIMGVFNKFQFDTHTVSMYILYALMLQVGISIGSNKNLKAIISHLH
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
PKMLLIPLGTITGTLLFSALASILLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPTIGI
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCE
QLATELGTIALLTNIFREMMALLGTPLIKKYFGKLAPISAAGVNSMDVLLPSISRYSGKE
EEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
MIPIAILHGILIDISVPVFVSFFCNL
CHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]