| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346102
Identifier: 29346102
GI number: 29346102
Start: 860396
End: 861199
Strand: Reverse
Name: 29346102
Synonym: BT_0692
Alternate gene names: NA
Gene position: 861199-860396 (Counterclockwise)
Preceding gene: 29346106
Following gene: 29346101
Centisome position: 13.76
GC content: 44.4
Gene sequence:
>804_bases ATGGTAAACAAGAATTTATACACTCTCCTGGTCTGCCTGCTTCTGGCCGGATGCGATCTGATAGACTACCACCCCTACGA TGTACGTATCAGTGGAGAGACAGACGTAAATGCTCATAACATTGAACAAATAGAAGCTAAGTGCAAAGGAAAGACAACCA TCCGTTTTATCACGATGGGCGATTCGCAGCGATGGTATGATGAGACAGAAGACTTTGTAAAAGAGGTCAATAAGAGAGAT GATATCGATTTCGTCATTCACGGAGGAGATATGAGTGACTTCGGGCTGACCAAAGAGTTTCTTTGGCAGCGGGACATCAT GAACGGACTGAAAGTGCCTTATGTCGTCCTTATCGGGAATCATGACTGTCTGGGTACCGGAGCAGAAACTTATCAGGCTG TTTTCGGACCTACCAACTTCTCATTCATTGCGGGCAATGTGAAATTCGTCTGCCTTAATACCAATGCGCTGGAATATGAT TATTCGGAGCCTATTCCCAATTTCGGTTTTATGGAACAGGAACTGACGGACAGGGCGGATGAGTTTGAAAAAACCGTAGT CAGCATGCATGCACATCCTTTTGCAGATGTGTTCAATGATAATGTGGCGAAGCCGTTCCAGTACTACATCACCCAATATC CGGGACTACAGTTCTGCACGGCCGCCCATAATCACGGATTCGATGACAGAATCCTTTTTGATGACGATGTGCATTATATT GTCAGCGACTGCATGAAAAGTCGCAGTTATCTGGTATTTACTATAACCCCGGAAAAATACGAATATGAACTGGTTGAATA CTAA
Upstream 100 bases:
>100_bases TATTGTTCCATTTTTCTTATTTCGCCCAAGCAATCGCCCATATCTCAACTGAAAACTCTATCTTCGCATCAAGTTTTCAA TTAAATAAATTATTCTATTT
Downstream 100 bases:
>100_bases ATATATGATCCGCGCAGGAGTACTGACTATGCTTCTACTCTTCCCCAGCCTGCTTTCGGCTACTTGCAAGCCAGATACCA TTATCAGGAACTATAAACCC
Product: calcineurin superfamily phosphohydrolase
Products: NA
Alternate protein names: Calcineurin Superfamily Phosphohydrolase; Phosphohydrolase; Lipoprotein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MVNKNLYTLLVCLLLAGCDLIDYHPYDVRISGETDVNAHNIEQIEAKCKGKTTIRFITMGDSQRWYDETEDFVKEVNKRD DIDFVIHGGDMSDFGLTKEFLWQRDIMNGLKVPYVVLIGNHDCLGTGAETYQAVFGPTNFSFIAGNVKFVCLNTNALEYD YSEPIPNFGFMEQELTDRADEFEKTVVSMHAHPFADVFNDNVAKPFQYYITQYPGLQFCTAAHNHGFDDRILFDDDVHYI VSDCMKSRSYLVFTITPEKYEYELVEY
Sequences:
>Translated_267_residues MVNKNLYTLLVCLLLAGCDLIDYHPYDVRISGETDVNAHNIEQIEAKCKGKTTIRFITMGDSQRWYDETEDFVKEVNKRD DIDFVIHGGDMSDFGLTKEFLWQRDIMNGLKVPYVVLIGNHDCLGTGAETYQAVFGPTNFSFIAGNVKFVCLNTNALEYD YSEPIPNFGFMEQELTDRADEFEKTVVSMHAHPFADVFNDNVAKPFQYYITQYPGLQFCTAAHNHGFDDRILFDDDVHYI VSDCMKSRSYLVFTITPEKYEYELVEY >Mature_267_residues MVNKNLYTLLVCLLLAGCDLIDYHPYDVRISGETDVNAHNIEQIEAKCKGKTTIRFITMGDSQRWYDETEDFVKEVNKRD DIDFVIHGGDMSDFGLTKEFLWQRDIMNGLKVPYVVLIGNHDCLGTGAETYQAVFGPTNFSFIAGNVKFVCLNTNALEYD YSEPIPNFGFMEQELTDRADEFEKTVVSMHAHPFADVFNDNVAKPFQYYITQYPGLQFCTAAHNHGFDDRILFDDDVHYI VSDCMKSRSYLVFTITPEKYEYELVEY
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30782; Mature: 30782
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKNLYTLLVCLLLAGCDLIDYHPYDVRISGETDVNAHNIEQIEAKCKGKTTIRFITMG CCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEC DSQRWYDETEDFVKEVNKRDDIDFVIHGGDMSDFGLTKEFLWQRDIMNGLKVPYVVLIGN CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEC HDCLGTGAETYQAVFGPTNFSFIAGNVKFVCLNTNALEYDYSEPIPNFGFMEQELTDRAD CCCCCCCHHHHHEEECCCCCEEEECCEEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHH EFEKTVVSMHAHPFADVFNDNVAKPFQYYITQYPGLQFCTAAHNHGFDDRILFDDDVHYI HHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCEEEHHHCCCCCCCCEEECCCHHHH VSDCMKSRSYLVFTITPEKYEYELVEY HHHHHCCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure MVNKNLYTLLVCLLLAGCDLIDYHPYDVRISGETDVNAHNIEQIEAKCKGKTTIRFITMG CCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEC DSQRWYDETEDFVKEVNKRDDIDFVIHGGDMSDFGLTKEFLWQRDIMNGLKVPYVVLIGN CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEC HDCLGTGAETYQAVFGPTNFSFIAGNVKFVCLNTNALEYDYSEPIPNFGFMEQELTDRAD CCCCCCCHHHHHEEECCCCCEEEECCEEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHH EFEKTVVSMHAHPFADVFNDNVAKPFQYYITQYPGLQFCTAAHNHGFDDRILFDDDVHYI HHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCEEEHHHCCCCCCCCEEECCCHHHH VSDCMKSRSYLVFTITPEKYEYELVEY HHHHHCCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA