Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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Identifier: 29346052

GI number:

Start: 790735

End: 791655

Strand: Reverse

Name: Not Available

Synonym: BT_0642

Alternate gene names: NA

Gene position: NA

Preceding gene: 29346053

Following gene: 29346050

Centisome position: NA

GC content: NA

Gene sequence:

>921_bases
ATGGAAAAAAGACCGAGAAGAACTCCTGCAGAAAAAGCACGTGCCCAATATACGAACTATGCAGTCAAAGAGCCCATGGA
ACTAATGGAGTTTCTGGCTGCCAAAATGCCGGACGCAAGCCGCACGAAACTGAAGTCATTACTGAGCAAACGGGTGGTAT
TGGTAGATAACGTAATCACCACTCAGTTCAACTTCCCGCTGCAACCCGGAATGAAAGTACAAATCAGCAAGGAAAAAGGA
AAGAAGGAATTTCATAACAGACTGCTGAAAATTGTATATGAGGACGCTTATATCATTGTAGTGGAAAAAATGCAAGGACT
CTTATCTGTCAATACCGAGCGACAAAAAGAGCGCACCGCTTATACGATTCTGAATGAATATGTACAGCGCTCGGGCAGAC
AGCACCGTGTGTTTATCGTACATCGTCTGGACAGGGATACATCAGGATTAATGATGTTCGCAAAAGACGAAAAAACACAA
CGGACATTACGTGACAACTGGCATGAAATAGTGACTGACCGCCGTTATGTAGCTGTTGTTGAGGGAACAATGGAGAAGGA
TTATGACACTGTGGTTTCCTGGCTGACGGATAAAACTCTTTATGTAAGTTCCAGCGATTACGATGATGGTGGTTCAAAAT
CCATCACACACTACAAGACAATCAAACGTGCTAACGGTTATTCACTGTTAGAACTTGATCTGGAAACAGGACGTAAGAAT
CAGATTCGTGTACATATGCAGGATTTAGGACATCCTATTATAGGTGACGGAAGATATGGAGGCGAAGAATCGCTTAACCC
GATCGGAAGACTGGCACTCCACGCCTTCAAACTTTGTTTCTATCATCCGGTGACGGGAGATTTAATGGAGTTTGAGACAC
CTTATCCGGGAGAGTTTAAGAAGTTGTTCCTGAAGAAATAA

Upstream 100 bases:

>100_bases
AACCTGTAGATATGTTCCCGCATACGCATCATGTGGAAAATGTAGTGTTGCTGGAGCTTCGATAATACGTTAGTTGAATT
GTTCGCAAAAGAAAAAAGAA

Downstream 100 bases:

>100_bases
AATAATAAAAATTCCCCTTATTTGCTGACAACTCTGTACATAGATTAGCCTTCAATAAGGGGAACTTTTATAAAAAATCG
ATATTTTTTCCAATTCCACA

Product: RNA pseudouridylate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>306_residues
MEKRPRRTPAEKARAQYTNYAVKEPMELMEFLAAKMPDASRTKLKSLLSKRVVLVDNVITTQFNFPLQPGMKVQISKEKG
KKEFHNRLLKIVYEDAYIIVVEKMQGLLSVNTERQKERTAYTILNEYVQRSGRQHRVFIVHRLDRDTSGLMMFAKDEKTQ
RTLRDNWHEIVTDRRYVAVVEGTMEKDYDTVVSWLTDKTLYVSSSDYDDGGSKSITHYKTIKRANGYSLLELDLETGRKN
QIRVHMQDLGHPIIGDGRYGGEESLNPIGRLALHAFKLCFYHPVTGDLMEFETPYPGEFKKLFLKK

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA