Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345932

Identifier: 29345932

GI number: 29345932

Start: 644318

End: 645232

Strand: Reverse

Name: 29345932

Synonym: BT_0522

Alternate gene names: NA

Gene position: 645232-644318 (Counterclockwise)

Preceding gene: 29345933

Following gene: 29345931

Centisome position: 10.31

GC content: 38.69

Gene sequence:

>915_bases
ATGGACAACTTTATCTACATAGCAGACGATTTCTTCTTTTTGTGTATAGGGCTTTTGCTCCTATACCTTTTCATATTGGC
TGTTGCCTCACATTTCAAACATTCCAATTATCCCAAAGCCAGAAAACAATATCAGTGTGCCATATTAGTTCCTTACGGAA
GCCTCCTTCCTTCAATATACCAACAGGAAGCATATGAATTCATCACATATAAAGATCTGCTGGAAGCAATTGATTCATTA
GATAAAGAACGATACGAATTAGTCATCCTTCTTTCTGATAAAGCCAGTGCTTTATCACCCCATTTTCTGGAAAAGATTTA
TAATGCCTACGATGCCGGAATACAGGCAATGCAGTTACACACGATCATTAATAATCGTAAGGGAGTACGGAAACGTTTCC
ATGCTCTATCCGAAGAAATCAATAACAGTCTTTTCAGATCGGGGAATACTCAGATCGGCTTTTCTTCAAGTCTTTTCGGA
ACCAATATGGCTTTCGACTTAGAATGGCTACAGAAGAATCAAAGAACTGCCAAAACAAATCTCGAACGGAAGTTATTCAA
ACAGAATATATATATTGAATATCTGCCGGATGTGATTGTACATTGTGACTCAGCCCCTGTTTATCCCTATCGCAGGCGCA
TACGGAAGACCCTCTCTTATCTATTGCCGTCTTTATTAGAAGGCAACTGGAATTTCTGCAACCGTATAGCCCAGCAGCTG
ATACCTTCTCCGATGAAATTATGTACCTTCGTCAGTATCTGGACTTTATTGATAACAGGATACCACTGGACCTCGTCACT
CAAATGGTGGATATTGCTTTTAGGATTGGCAATCACATACAGTCTGGCAATACCGAATTATTTAGTAGAAGATAAAAAGA
AACAAAAATATTCAATATGGAGAAAAGGACACTGA

Upstream 100 bases:

>100_bases
ATATGCAAAAAACTTCTCTTTCGGACTGGACATAAAAATCATTCTGAAAACAGTTACTGCATTCGTTCAAAAAGAGAACG
TATAACTCTTTCACTGCAGA

Downstream 100 bases:

>100_bases
AACAGCGAATCAAACAGAATCCGGCTTTGAAACAAGCCGTACATCGTTTTATTATGCATCCCGTAAAGACACGTCCCAAC
TGGTGGATACGCCTTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDNFIYIADDFFFLCIGLLLLYLFILAVASHFKHSNYPKARKQYQCAILVPYGSLLPSIYQQEAYEFITYKDLLEAIDSL
DKERYELVILLSDKASALSPHFLEKIYNAYDAGIQAMQLHTIINNRKGVRKRFHALSEEINNSLFRSGNTQIGFSSSLFG
TNMAFDLEWLQKNQRTAKTNLERKLFKQNIYIEYLPDVIVHCDSAPVYPYRRRIRKTLSYLLPSLLEGNWNFCNRIAQQL
IPSPMKLCTFVSIWTLLITGYHWTSSLKWWILLLGLAITYSLAIPNYLVEDKKKQKYSIWRKGH

Sequences:

>Translated_304_residues
MDNFIYIADDFFFLCIGLLLLYLFILAVASHFKHSNYPKARKQYQCAILVPYGSLLPSIYQQEAYEFITYKDLLEAIDSL
DKERYELVILLSDKASALSPHFLEKIYNAYDAGIQAMQLHTIINNRKGVRKRFHALSEEINNSLFRSGNTQIGFSSSLFG
TNMAFDLEWLQKNQRTAKTNLERKLFKQNIYIEYLPDVIVHCDSAPVYPYRRRIRKTLSYLLPSLLEGNWNFCNRIAQQL
IPSPMKLCTFVSIWTLLITGYHWTSSLKWWILLLGLAITYSLAIPNYLVEDKKKQKYSIWRKGH
>Mature_304_residues
MDNFIYIADDFFFLCIGLLLLYLFILAVASHFKHSNYPKARKQYQCAILVPYGSLLPSIYQQEAYEFITYKDLLEAIDSL
DKERYELVILLSDKASALSPHFLEKIYNAYDAGIQAMQLHTIINNRKGVRKRFHALSEEINNSLFRSGNTQIGFSSSLFG
TNMAFDLEWLQKNQRTAKTNLERKLFKQNIYIEYLPDVIVHCDSAPVYPYRRRIRKTLSYLLPSLLEGNWNFCNRIAQQL
IPSPMKLCTFVSIWTLLITGYHWTSSLKWWILLLGLAITYSLAIPNYLVEDKKKQKYSIWRKGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35583; Mature: 35583

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFIYIADDFFFLCIGLLLLYLFILAVASHFKHSNYPKARKQYQCAILVPYGSLLPSIY
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCHHHHHHHH
QQEAYEFITYKDLLEAIDSLDKERYELVILLSDKASALSPHFLEKIYNAYDAGIQAMQLH
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TIINNRKGVRKRFHALSEEINNSLFRSGNTQIGFSSSLFGTNMAFDLEWLQKNQRTAKTN
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
LERKLFKQNIYIEYLPDVIVHCDSAPVYPYRRRIRKTLSYLLPSLLEGNWNFCNRIAQQL
HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IPSPMKLCTFVSIWTLLITGYHWTSSLKWWILLLGLAITYSLAIPNYLVEDKKKQKYSIW
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHC
RKGH
CCCC
>Mature Secondary Structure
MDNFIYIADDFFFLCIGLLLLYLFILAVASHFKHSNYPKARKQYQCAILVPYGSLLPSIY
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCHHHHHHHH
QQEAYEFITYKDLLEAIDSLDKERYELVILLSDKASALSPHFLEKIYNAYDAGIQAMQLH
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TIINNRKGVRKRFHALSEEINNSLFRSGNTQIGFSSSLFGTNMAFDLEWLQKNQRTAKTN
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
LERKLFKQNIYIEYLPDVIVHCDSAPVYPYRRRIRKTLSYLLPSLLEGNWNFCNRIAQQL
HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IPSPMKLCTFVSIWTLLITGYHWTSSLKWWILLLGLAITYSLAIPNYLVEDKKKQKYSIW
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHC
RKGH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA