| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345863
Identifier: 29345863
GI number: 29345863
Start: 555562
End: 556725
Strand: Reverse
Name: 29345863
Synonym: BT_0453
Alternate gene names: NA
Gene position: 556725-555562 (Counterclockwise)
Preceding gene: 29345864
Following gene: 29345862
Centisome position: 8.89
GC content: 45.27
Gene sequence:
>1164_bases ATGGATTTTAAGAAACTAGCGAATCAGTACCGGGATGAATTGTTGGACAATGTCCTTCCATTCTGGCTCGAGCACTCTCA AGATCTTGAGTTTGGCGGTTATTTCAGCTGCCTGGACCGTGAAGGGAAGGTTTTCGATACGGATAAGTTCATCTGGTTGC AGGGACGTGAGGTATGGATGTTCTCCATGCTTTACAACAAAGTGGAAAAACGACAGGAATGGCTGGATTGTGCCGTTCAG GGTGGTGAATTCTTAAAAAAATACGGACATGATGGAAATTATAACTGGTACTTTTCACTCGACCGTTCGGGTAGACCACT GGTAGAACCATACAATATTTTCTCATATACTTTCGCCACGATGGCCTTCGGACAGCTGAGTCTAGCAACTGGTAATCAGG AATATGCGGACATAGCAAAGAAGACTTTCAAGATCATCCTTTCCAAGGTTGATAATCCGAAAAGCAAGTGGAACAAGCTT CATCCGGGTACTCGTAATCTGAAGAACTTCGCCCTCCCGATGATCCTCTGTAATCTGGCTTTGGAGATCGAACATCTCCT GGATCCCGGCTATCTGGAACAGACGATGGAAACCTGTATCCATGAAGTGATGGATGTCTTTTATCGTCCGGAGCTGGGGG GCATCATTGTTGAGAATGTCGATATGGACGGTAATCTGGTGGATTGCTTCGAAGGTCGTCAGGTGACTCCCGGTCATGCT ATCGAAGCGATGTGGTTTATCATGGATCTGGGCAAACGCCTGAATCGTCCGAAATTGATAGAAAAAGCAAAAGACGTAAC CCTGACAATGCTCGACTATGGTTGGGACAAGCAATATGGAGGTATCTATTACTTTATGGACCGTAACGGTTGTCCTCCCC AGCAATTGGAATGGGATCAGAAACTTTGGTGGGTGCATATTGAATCTCTGATATCACTGCTGAAAGGTTATCAGCTGACC GGAGACAGGAAATGTCTGGAATGGTTTGAAAAAGTGCATGACTACACATGGTCGCACTTCAAAGATCCGGAATATCCGGA ATGGTACGGATATCTGAATCGCAGAGGGGAAGTTTTGTTACCGCTGAAAGGTGGTAAATGGAAAGGGTGCTTTCATGTAC CAAGGGGATTATTTCAATGCTGGAAAGTATTAGAACCGCTATAG
Upstream 100 bases:
>100_bases AGAAGTATAGAGAAGCCGCAGGCGGTTTTCTGCATGGCCATTCAAGAAACGTTTCCCGCCTTCGGTGTACCCTATACCTA TCTATAATAAAAACAATATT
Downstream 100 bases:
>100_bases AAACAATGAATTATTATGTTAACCAATCTTATTAATAATCTAAAAATTAATTCTATGACAGAGTTTAACTCAAAAATTAA GCAAAACTCTCGCATATTGA
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: N-Acyl-D-Glucosamine 2-Epimerase; N-Acylglucosamine 2-Epimerase Superfamily; Mannose-6-Phosphate Isomerase; N-Acyl-D-Glucosamine 2-Epimerase-Like Protein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MDFKKLANQYRDELLDNVLPFWLEHSQDLEFGGYFSCLDREGKVFDTDKFIWLQGREVWMFSMLYNKVEKRQEWLDCAVQ GGEFLKKYGHDGNYNWYFSLDRSGRPLVEPYNIFSYTFATMAFGQLSLATGNQEYADIAKKTFKIILSKVDNPKSKWNKL HPGTRNLKNFALPMILCNLALEIEHLLDPGYLEQTMETCIHEVMDVFYRPELGGIIVENVDMDGNLVDCFEGRQVTPGHA IEAMWFIMDLGKRLNRPKLIEKAKDVTLTMLDYGWDKQYGGIYYFMDRNGCPPQQLEWDQKLWWVHIESLISLLKGYQLT GDRKCLEWFEKVHDYTWSHFKDPEYPEWYGYLNRRGEVLLPLKGGKWKGCFHVPRGLFQCWKVLEPL
Sequences:
>Translated_387_residues MDFKKLANQYRDELLDNVLPFWLEHSQDLEFGGYFSCLDREGKVFDTDKFIWLQGREVWMFSMLYNKVEKRQEWLDCAVQ GGEFLKKYGHDGNYNWYFSLDRSGRPLVEPYNIFSYTFATMAFGQLSLATGNQEYADIAKKTFKIILSKVDNPKSKWNKL HPGTRNLKNFALPMILCNLALEIEHLLDPGYLEQTMETCIHEVMDVFYRPELGGIIVENVDMDGNLVDCFEGRQVTPGHA IEAMWFIMDLGKRLNRPKLIEKAKDVTLTMLDYGWDKQYGGIYYFMDRNGCPPQQLEWDQKLWWVHIESLISLLKGYQLT GDRKCLEWFEKVHDYTWSHFKDPEYPEWYGYLNRRGEVLLPLKGGKWKGCFHVPRGLFQCWKVLEPL >Mature_387_residues MDFKKLANQYRDELLDNVLPFWLEHSQDLEFGGYFSCLDREGKVFDTDKFIWLQGREVWMFSMLYNKVEKRQEWLDCAVQ GGEFLKKYGHDGNYNWYFSLDRSGRPLVEPYNIFSYTFATMAFGQLSLATGNQEYADIAKKTFKIILSKVDNPKSKWNKL HPGTRNLKNFALPMILCNLALEIEHLLDPGYLEQTMETCIHEVMDVFYRPELGGIIVENVDMDGNLVDCFEGRQVTPGHA IEAMWFIMDLGKRLNRPKLIEKAKDVTLTMLDYGWDKQYGGIYYFMDRNGCPPQQLEWDQKLWWVHIESLISLLKGYQLT GDRKCLEWFEKVHDYTWSHFKDPEYPEWYGYLNRRGEVLLPLKGGKWKGCFHVPRGLFQCWKVLEPL
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI213417820, Length=381, Percent_Identity=39.8950131233596, Blast_Score=263, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45718; Mature: 45718
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKKLANQYRDELLDNVLPFWLEHSQDLEFGGYFSCLDREGKVFDTDKFIWLQGREVWM CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCEEEEECCHHHH FSMLYNKVEKRQEWLDCAVQGGEFLKKYGHDGNYNWYFSLDRSGRPLVEPYNIFSYTFAT HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH MAFGQLSLATGNQEYADIAKKTFKIILSKVDNPKSKWNKLHPGTRNLKNFALPMILCNLA HHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH LEIEHLLDPGYLEQTMETCIHEVMDVFYRPELGGIIVENVDMDGNLVDCFEGRQVTPGHA HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCCHH IEAMWFIMDLGKRLNRPKLIEKAKDVTLTMLDYGWDKQYGGIYYFMDRNGCPPQQLEWDQ HHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHCCCCH KLWWVHIESLISLLKGYQLTGDRKCLEWFEKVHDYTWSHFKDPEYPEWYGYLNRRGEVLL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHCCCCCEEE PLKGGKWKGCFHVPRGLFQCWKVLEPL EECCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFKKLANQYRDELLDNVLPFWLEHSQDLEFGGYFSCLDREGKVFDTDKFIWLQGREVWM CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCEEEEECCHHHH FSMLYNKVEKRQEWLDCAVQGGEFLKKYGHDGNYNWYFSLDRSGRPLVEPYNIFSYTFAT HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH MAFGQLSLATGNQEYADIAKKTFKIILSKVDNPKSKWNKLHPGTRNLKNFALPMILCNLA HHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH LEIEHLLDPGYLEQTMETCIHEVMDVFYRPELGGIIVENVDMDGNLVDCFEGRQVTPGHA HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCCHH IEAMWFIMDLGKRLNRPKLIEKAKDVTLTMLDYGWDKQYGGIYYFMDRNGCPPQQLEWDQ HHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHCCCCH KLWWVHIESLISLLKGYQLTGDRKCLEWFEKVHDYTWSHFKDPEYPEWYGYLNRRGEVLL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHCCCCCEEE PLKGGKWKGCFHVPRGLFQCWKVLEPL EECCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA