| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345814
Identifier: 29345814
GI number: 29345814
Start: 491607
End: 493934
Strand: Reverse
Name: 29345814
Synonym: BT_0404
Alternate gene names: NA
Gene position: 493934-491607 (Counterclockwise)
Preceding gene: 29345816
Following gene: 29345813
Centisome position: 7.89
GC content: 48.5
Gene sequence:
>2328_bases ATGCAAGTACTCGAAGAAATTAAAGTTTCCGTTTACGAAAATGTGTATTCCAAAAAGCCTAAAATCATGTCTTTCCTCGA AGTCATCTTTATGTGTATTCATCCGGTTTATGCTTCCATCATCCAATCCATCCGGCGGTATCATCAGGAAGGCGACCATG AAGCCGCCCAAAAACTAAAAAGCCAGCTCCCCTGCTTCACTCCTGCCGGCACCTTCGACGGAGCGCATGCCATCCGAAAT TTCCAGTTGCCCAGTCACATTATCGGACTCGACTACGACCACGTTCCCAATCGGCTGGAGATCATCCGTCTTTGCGCTGC CGACCCTCATACCGTAGCTGCTCTGGAAAGCCCTACGGACGGCGTGAAAATCTTCGCCTATGTGGAAGGCATCGAAGGCC GTCACCGGGAAGGGCAGTTACTGGTCAGCCGTTACTACGACCAGCTGACCGGGCTCACCAGCGATCCCGCCTGTAAAGAC GAAAGCCGCCTGTGCTATTTCACCTATTCACCGGACGGATACGTAGCCAGTCTCTATCAGTCATTCGTTCTGGAAGCAGC TGTGGAAACACAACCGTTCCAGCCGACAGCAGAAAACCTCCCCTCTCCTCCGCTACCTGCAAAAGCAAACGAAACCTCCG AGAACTTCTCGGAAGAGGAAGTCAGCTTGTTCCTTTCGTCCTACATTTTCTTAAATCCATTGACCGCCGGGCAACGACAC ACCAATCTGTTTAAACTCGCCTGCGAAGCTTGCCGGAGAAGATATTCGCAAGAAAGCATATTACGCGGGATTACGGTTTA TTTTGAGCACTCCGACTTTCCCGCACAGGAAATCAGGAGCATCCTACAATCTGGTTACCAAAAAGTTACCTCTACTCCAT CCGTCTCCGCCTCTCCGCTTTGCTCTTCTCTTCATAAGGACAAAATGACAAAAGTGACATATAGCCCATCCGAAAACGTC TATGAAGCAGATGAAGCGTATTGGCAAGGCGAAGAATTCAGAAAAGAAACGCCCTGTTTTCCCAAAAGCGTGTACAAATA TCTGCCCGATCTGCTGAACGAATGTATCCTCGAAGAGGAAGGTGATCGTGAACAGGATCTTTCCTTTCTCTCCAACCTCA CCGCATTGAGTTCCGTACTGCCCGGCACATTCGGCATCTATAATCACAAAAAGTATTCTCCCCATTTCTACAGTTTCGGC ATTGCCCCCGCCGGGAGCAACAAGAGCATTGCGCAAACAGGACGTTATCTGCTGGAAGAGGTCCACGACTGGATACTTTC CAATAGCGAACTTCAGCAGAAAATTTATAACCATAAGTACACCCAATGGAAGCTGGACTGTACTTATAAGAAAAAGGCAC ATGAAGAGTGTCCCGAAGAACCGGAAAAACCAGCTTACAAAATGCTTTTTCTCCCTGCCACTACCAGCTACAGCCGTATG CAGATCCAAATGCGGGACAACGGTCCGCAAGGAAGCATCATATTCGATACCGAGGCGCAGACGCTGGCTACAGCCAATCA TCTGGATTGCGGTAACTTTGACGATATGCTCCGCAAGGCATTCGAGCATGAAAATATCGATTCCGCTTTCAAGATCAATG GCTTAACCCCCATTTATATCCGTTTTCCCATGCTTGCCATGTTCCTCACCGGCACCCCGAGTCAGATGGCTTCACTGATA GAGACTTCGGAAAAAGGACTTCCGAGCCGTATCATGCTCTACACTTTCCGCAGCATTCCGAAGTGGAAGCCCATGGGAGA TGACAGTATCTCGCTCGAAGAGTCTTTCAAACCGCTGGCACATCGTGTCTTCGAGCTTTATCATTTCTGCAAGAATCATC CTGTATTGTTTCACTTCAGCCGTTCTCAATGGGATTATCTGAATCATACGTTTTCTAAGCTGCTTGCCGAAGTGGTTCTG GAAGGTAACGATGACCTTCAGGCCGTTGTCAAACGGTATGCCTGTCTTGTGATGCGCATCAGCATGATCCAGGCACGCAT CCGCCAGTTCGAGGCGAATGATGGCGCACCGGATATCTATTGTGAGGATGTAGATTTCGAGCGTTCTCTCCAGATCGTTC TCTGCTGTTATGAGCATAGCAGGCTATTATTGTCTTCCATGCCGTCTTCCCAGCTCCATCCGTTGAAAGATCCGAACAGT ACACGGAAGTTCATCGGCGAGTTGCCAGAAACATTCACTACCGAAGATGCAATGCAGATCGGCGTAAAATACGATTTCAG CCACCGCAAGATCAGCAGGCTGATAAAATCGTTCATTGGCGTCAAAATCAATAAGATATCTCATGGAAAGTATCAGAAGA TCTCATAA
Upstream 100 bases:
>100_bases ATCTGTTTCAACCTATGAAACAAGTTCTAATTCCCCCTCCTTTACCTTTGCACCCGCTATCCCGATAGTGGGATATACAA TCATAAAACATCAAAATCAA
Downstream 100 bases:
>100_bases AATAGTCCTATCTGTCATTTTTGTCCTTTTGTCCTTTTGAAGACTCTCTGAAAACATTGGGAAGTTTGAAAAAACCTTCT CAATGATCGGATGCAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 775; Mature: 775
Protein sequence:
>775_residues MQVLEEIKVSVYENVYSKKPKIMSFLEVIFMCIHPVYASIIQSIRRYHQEGDHEAAQKLKSQLPCFTPAGTFDGAHAIRN FQLPSHIIGLDYDHVPNRLEIIRLCAADPHTVAALESPTDGVKIFAYVEGIEGRHREGQLLVSRYYDQLTGLTSDPACKD ESRLCYFTYSPDGYVASLYQSFVLEAAVETQPFQPTAENLPSPPLPAKANETSENFSEEEVSLFLSSYIFLNPLTAGQRH TNLFKLACEACRRRYSQESILRGITVYFEHSDFPAQEIRSILQSGYQKVTSTPSVSASPLCSSLHKDKMTKVTYSPSENV YEADEAYWQGEEFRKETPCFPKSVYKYLPDLLNECILEEEGDREQDLSFLSNLTALSSVLPGTFGIYNHKKYSPHFYSFG IAPAGSNKSIAQTGRYLLEEVHDWILSNSELQQKIYNHKYTQWKLDCTYKKKAHEECPEEPEKPAYKMLFLPATTSYSRM QIQMRDNGPQGSIIFDTEAQTLATANHLDCGNFDDMLRKAFEHENIDSAFKINGLTPIYIRFPMLAMFLTGTPSQMASLI ETSEKGLPSRIMLYTFRSIPKWKPMGDDSISLEESFKPLAHRVFELYHFCKNHPVLFHFSRSQWDYLNHTFSKLLAEVVL EGNDDLQAVVKRYACLVMRISMIQARIRQFEANDGAPDIYCEDVDFERSLQIVLCCYEHSRLLLSSMPSSQLHPLKDPNS TRKFIGELPETFTTEDAMQIGVKYDFSHRKISRLIKSFIGVKINKISHGKYQKIS
Sequences:
>Translated_775_residues MQVLEEIKVSVYENVYSKKPKIMSFLEVIFMCIHPVYASIIQSIRRYHQEGDHEAAQKLKSQLPCFTPAGTFDGAHAIRN FQLPSHIIGLDYDHVPNRLEIIRLCAADPHTVAALESPTDGVKIFAYVEGIEGRHREGQLLVSRYYDQLTGLTSDPACKD ESRLCYFTYSPDGYVASLYQSFVLEAAVETQPFQPTAENLPSPPLPAKANETSENFSEEEVSLFLSSYIFLNPLTAGQRH TNLFKLACEACRRRYSQESILRGITVYFEHSDFPAQEIRSILQSGYQKVTSTPSVSASPLCSSLHKDKMTKVTYSPSENV YEADEAYWQGEEFRKETPCFPKSVYKYLPDLLNECILEEEGDREQDLSFLSNLTALSSVLPGTFGIYNHKKYSPHFYSFG IAPAGSNKSIAQTGRYLLEEVHDWILSNSELQQKIYNHKYTQWKLDCTYKKKAHEECPEEPEKPAYKMLFLPATTSYSRM QIQMRDNGPQGSIIFDTEAQTLATANHLDCGNFDDMLRKAFEHENIDSAFKINGLTPIYIRFPMLAMFLTGTPSQMASLI ETSEKGLPSRIMLYTFRSIPKWKPMGDDSISLEESFKPLAHRVFELYHFCKNHPVLFHFSRSQWDYLNHTFSKLLAEVVL EGNDDLQAVVKRYACLVMRISMIQARIRQFEANDGAPDIYCEDVDFERSLQIVLCCYEHSRLLLSSMPSSQLHPLKDPNS TRKFIGELPETFTTEDAMQIGVKYDFSHRKISRLIKSFIGVKINKISHGKYQKIS >Mature_775_residues MQVLEEIKVSVYENVYSKKPKIMSFLEVIFMCIHPVYASIIQSIRRYHQEGDHEAAQKLKSQLPCFTPAGTFDGAHAIRN FQLPSHIIGLDYDHVPNRLEIIRLCAADPHTVAALESPTDGVKIFAYVEGIEGRHREGQLLVSRYYDQLTGLTSDPACKD ESRLCYFTYSPDGYVASLYQSFVLEAAVETQPFQPTAENLPSPPLPAKANETSENFSEEEVSLFLSSYIFLNPLTAGQRH TNLFKLACEACRRRYSQESILRGITVYFEHSDFPAQEIRSILQSGYQKVTSTPSVSASPLCSSLHKDKMTKVTYSPSENV YEADEAYWQGEEFRKETPCFPKSVYKYLPDLLNECILEEEGDREQDLSFLSNLTALSSVLPGTFGIYNHKKYSPHFYSFG IAPAGSNKSIAQTGRYLLEEVHDWILSNSELQQKIYNHKYTQWKLDCTYKKKAHEECPEEPEKPAYKMLFLPATTSYSRM QIQMRDNGPQGSIIFDTEAQTLATANHLDCGNFDDMLRKAFEHENIDSAFKINGLTPIYIRFPMLAMFLTGTPSQMASLI ETSEKGLPSRIMLYTFRSIPKWKPMGDDSISLEESFKPLAHRVFELYHFCKNHPVLFHFSRSQWDYLNHTFSKLLAEVVL EGNDDLQAVVKRYACLVMRISMIQARIRQFEANDGAPDIYCEDVDFERSLQIVLCCYEHSRLLLSSMPSSQLHPLKDPNS TRKFIGELPETFTTEDAMQIGVKYDFSHRKISRLIKSFIGVKINKISHGKYQKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88610; Mature: 88610
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVLEEIKVSVYENVYSKKPKIMSFLEVIFMCIHPVYASIIQSIRRYHQEGDHEAAQKLK CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SQLPCFTPAGTFDGAHAIRNFQLPSHIIGLDYDHVPNRLEIIRLCAADPHTVAALESPTD HHCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCC GVKIFAYVEGIEGRHREGQLLVSRYYDQLTGLTSDPACKDESRLCYFTYSPDGYVASLYQ CEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH SFVLEAAVETQPFQPTAENLPSPPLPAKANETSENFSEEEVSLFLSSYIFLNPLTAGQRH HHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH TNLFKLACEACRRRYSQESILRGITVYFEHSDFPAQEIRSILQSGYQKVTSTPSVSASPL HHHHHHHHHHHHHHCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH CSSLHKDKMTKVTYSPSENVYEADEAYWQGEEFRKETPCFPKSVYKYLPDLLNECILEEE HHHHHHHHCEEEEECCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC GDREQDLSFLSNLTALSSVLPGTFGIYNHKKYSPHFYSFGIAPAGSNKSIAQTGRYLLEE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH VHDWILSNSELQQKIYNHKYTQWKLDCTYKKKAHEECPEEPEKPAYKMLFLPATTSYSRM HHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEE QIQMRDNGPQGSIIFDTEAQTLATANHLDCGNFDDMLRKAFEHENIDSAFKINGLTPIYI EEEEECCCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHH RFPMLAMFLTGTPSQMASLIETSEKGLPSRIMLYTFRSIPKWKPMGDDSISLEESFKPLA HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH HRVFELYHFCKNHPVLFHFSRSQWDYLNHTFSKLLAEVVLEGNDDLQAVVKRYACLVMRI HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SMIQARIRQFEANDGAPDIYCEDVDFERSLQIVLCCYEHSRLLLSSMPSSQLHPLKDPNS HHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCH TRKFIGELPETFTTEDAMQIGVKYDFSHRKISRLIKSFIGVKINKISHGKYQKIS HHHHHHHCCHHCCCCHHHHCCCEECCCHHHHHHHHHHHHCCEEEEECCCCCCCCC >Mature Secondary Structure MQVLEEIKVSVYENVYSKKPKIMSFLEVIFMCIHPVYASIIQSIRRYHQEGDHEAAQKLK CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SQLPCFTPAGTFDGAHAIRNFQLPSHIIGLDYDHVPNRLEIIRLCAADPHTVAALESPTD HHCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCC GVKIFAYVEGIEGRHREGQLLVSRYYDQLTGLTSDPACKDESRLCYFTYSPDGYVASLYQ CEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH SFVLEAAVETQPFQPTAENLPSPPLPAKANETSENFSEEEVSLFLSSYIFLNPLTAGQRH HHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH TNLFKLACEACRRRYSQESILRGITVYFEHSDFPAQEIRSILQSGYQKVTSTPSVSASPL HHHHHHHHHHHHHHCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH CSSLHKDKMTKVTYSPSENVYEADEAYWQGEEFRKETPCFPKSVYKYLPDLLNECILEEE HHHHHHHHCEEEEECCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC GDREQDLSFLSNLTALSSVLPGTFGIYNHKKYSPHFYSFGIAPAGSNKSIAQTGRYLLEE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH VHDWILSNSELQQKIYNHKYTQWKLDCTYKKKAHEECPEEPEKPAYKMLFLPATTSYSRM HHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEE QIQMRDNGPQGSIIFDTEAQTLATANHLDCGNFDDMLRKAFEHENIDSAFKINGLTPIYI EEEEECCCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHH RFPMLAMFLTGTPSQMASLIETSEKGLPSRIMLYTFRSIPKWKPMGDDSISLEESFKPLA HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH HRVFELYHFCKNHPVLFHFSRSQWDYLNHTFSKLLAEVVLEGNDDLQAVVKRYACLVMRI HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SMIQARIRQFEANDGAPDIYCEDVDFERSLQIVLCCYEHSRLLLSSMPSSQLHPLKDPNS HHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCH TRKFIGELPETFTTEDAMQIGVKYDFSHRKISRLIKSFIGVKINKISHGKYQKIS HHHHHHHCCHHCCCCHHHHCCCEECCCHHHHHHHHHHHHCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA