| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345775
Identifier: 29345775
GI number: 29345775
Start: 443848
End: 446127
Strand: Reverse
Name: 29345775
Synonym: BT_0365
Alternate gene names: NA
Gene position: 446127-443848 (Counterclockwise)
Preceding gene: 29345776
Following gene: 29345774
Centisome position: 7.13
GC content: 45.53
Gene sequence:
>2280_bases ATGGCAATTCTTACCGTTCTCAGCATGAGTTCTTGTCAGGATTGGGGAGAAGCCGATCCACCGGCAGGAAATCAAAAACT TCCAGCAAAGCCGGATACCTCCGCTAAATTAATAGCTGAATTTACATTTGACGAAGATTTCAACTCTACTGCCACCGAAG GCAAAACACCTATATCGGGGGAAGGTTTTGCATACAGTGCAGATCAAGAGATTCCGGAAATCGTACAAGATGATGAAAGA GAAAGTGGAGTTATGCACGCCAACGGCGGATACCTCCGCATTCCCAACCCTCTTATCGGTGCAGATATCCAGACAGGAGT CTCATTTAGTTTCTTCGTAAAATCTACTAAAACAGACCATACAGGCGCACTGATCTCATTCAGTGACGGAACAAACAAAC TGTATTTCACTGCAAATGCTTTTTTGAGCTATACCGGCACAGGAGGCTATCTGGACGTAAATGATCCGGAAGTCAGTGTA ACGAACGCAATGCCTTACGGGACATGGCATTATGTTGCCTTGACTTTCACAGAGAAAGGATACGCCATTTATATCGATGG CACCAAGAAATACGATACCAACAACCATGCCAGCATCAGTTCCGGAAAGACAAGGGCTGTGAGCGTAGGTGACTTCGATT ATTCCAATATGATCGATTTATTGTCATCTGCGACCTATATATATTTAGGCTATGGTTCGGATACGGAAACAGCCGAAGCC TATTATGATGATCTGAAGATCTGGACAAATACTTTCTCGGACAGCGATGCTCAGGGACCGAATATCGGTAGCGGAATACA TGTGCCCGATCCTGTTTATAAAGCTACTTTCGAAACGACTACCGGACTACAGATCATTGGCGGTGGCAGCTTTGTTACAG ATGATAATAGCGCCTTCGGAACCGTATTCAAGAATATCCCCGGAGGAATGCGTCAGAATTACTTGTTGCTTCCGGAAGAT GTAATGTCACATTCTGCCGAAACGAAGGAAATGTCTATCGGTATGTGGGTGAATGCGAAGGATGCCGGAATCTCATCCAC TTATATGTGGTCACCATTATTCAGTGCTCACGGGCAGGCACCGGGCATAGCAGGTACTGCCAATACAGACAACTGGCCTA TGTTTGCATTGTATGTAAGAGGAACATTACAACTGAATAATGCCGGATGGTGCAACTTTGATGATGCACAGAATGTAAAT GGTACCAATGCTCTATATCATGACGCCACTGACTGGTTAGCCGATCACGGGTGGCATTACTATACAGTAACTCTCACCGC TACTTCCGCCAAAGTATATATGGATGGCGAACTGAAGAACGAATGGCAGGTGGCAGGTACCGGAGATAATAATACAATTG AAGGTGCATTCATTTATGGTGCCAACTACAAATACATCACTTTAGGCGGAAATCAGGCGTTCGACTGGGGCGATCCCGAT CCGGGATTCATGTTTGACGACTTCGCAGTCTATAACAAAGAATTGTCTCCGGAACAGATCAAACAGATTATGGAAGACAA GACTTTGGCTCTGCCTACTCCTGTCTACATCAATACCTTTGAAGAAGGAACCGGAGATGCAAAAATCGTAGGTTCGGGCA AAATAGTTTCAGTGGAAGACAAAGGGTTCGGACAAATATTCCAGAATGTAGCCGGTTCTAAAGGCACTAATTATCTGATG TTGCCTCAGGATGCTCTTTCCCACTCCGTAGAATCTCAGGAAGTGAGTATTAGTGTATGGGTGAATGCCAAGAATGCAGG AGCATCGGACGATTATCGCTATTCTCCCCTATTCACGGCATACGGAAACGAGCCGTCGGCAGGATCAGAGAATATATGGC CATTGTTTGTCCTGCAATCCCGCGGACTTGCCCAAATAAACTGTAACGGATGGACAGACTTCACCGCCGCACAAAATGAG AAAGGTGTCAACACCGTTTATTGCTCGGAATATGCAGCAGATGGAATCGTTTGTGAGGAAGACTGGCTGAAGGATCATGA ATGGCATCTTTACACAGCCGTTCTCACGTCTACCACCTGTAAAATCTACATTGACGGAGAAGTCGCCAACTCATGGACAG TATCGGGCAGCGGTGACGGCAATACCATCTCCGGAATATTCACCAACGGTGCAGACTTGAAATACATCTCATTGGGCGGA AACCAGGCATGGACATGGGCTGACCCTGATCCCGGATTTATGTTCGACGACATCGCTATCTACAACAAAGCACTGACAAT CGATGAGATACAGGCTATTATGAAAAAGAAAAAGAATTAA
Upstream 100 bases:
>100_bases TACTCATCGGTTGTATTTTTGCGACACTACAACGAGTAGAATTATTGTTGAACCATTAATATCAATATCTATGAAGACAA GGAAATGGCCGTTACTACTT
Downstream 100 bases:
>100_bases ACCTTAAAGTTTAGTATACATGAAAAATTTTATACTGATACTCTGCCTCGCCACATTCAGCCAATGGGTGTATGCGCAGA ACAAGCAGATCACCGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MAILTVLSMSSCQDWGEADPPAGNQKLPAKPDTSAKLIAEFTFDEDFNSTATEGKTPISGEGFAYSADQEIPEIVQDDER ESGVMHANGGYLRIPNPLIGADIQTGVSFSFFVKSTKTDHTGALISFSDGTNKLYFTANAFLSYTGTGGYLDVNDPEVSV TNAMPYGTWHYVALTFTEKGYAIYIDGTKKYDTNNHASISSGKTRAVSVGDFDYSNMIDLLSSATYIYLGYGSDTETAEA YYDDLKIWTNTFSDSDAQGPNIGSGIHVPDPVYKATFETTTGLQIIGGGSFVTDDNSAFGTVFKNIPGGMRQNYLLLPED VMSHSAETKEMSIGMWVNAKDAGISSTYMWSPLFSAHGQAPGIAGTANTDNWPMFALYVRGTLQLNNAGWCNFDDAQNVN GTNALYHDATDWLADHGWHYYTVTLTATSAKVYMDGELKNEWQVAGTGDNNTIEGAFIYGANYKYITLGGNQAFDWGDPD PGFMFDDFAVYNKELSPEQIKQIMEDKTLALPTPVYINTFEEGTGDAKIVGSGKIVSVEDKGFGQIFQNVAGSKGTNYLM LPQDALSHSVESQEVSISVWVNAKNAGASDDYRYSPLFTAYGNEPSAGSENIWPLFVLQSRGLAQINCNGWTDFTAAQNE KGVNTVYCSEYAADGIVCEEDWLKDHEWHLYTAVLTSTTCKIYIDGEVANSWTVSGSGDGNTISGIFTNGADLKYISLGG NQAWTWADPDPGFMFDDIAIYNKALTIDEIQAIMKKKKN
Sequences:
>Translated_759_residues MAILTVLSMSSCQDWGEADPPAGNQKLPAKPDTSAKLIAEFTFDEDFNSTATEGKTPISGEGFAYSADQEIPEIVQDDER ESGVMHANGGYLRIPNPLIGADIQTGVSFSFFVKSTKTDHTGALISFSDGTNKLYFTANAFLSYTGTGGYLDVNDPEVSV TNAMPYGTWHYVALTFTEKGYAIYIDGTKKYDTNNHASISSGKTRAVSVGDFDYSNMIDLLSSATYIYLGYGSDTETAEA YYDDLKIWTNTFSDSDAQGPNIGSGIHVPDPVYKATFETTTGLQIIGGGSFVTDDNSAFGTVFKNIPGGMRQNYLLLPED VMSHSAETKEMSIGMWVNAKDAGISSTYMWSPLFSAHGQAPGIAGTANTDNWPMFALYVRGTLQLNNAGWCNFDDAQNVN GTNALYHDATDWLADHGWHYYTVTLTATSAKVYMDGELKNEWQVAGTGDNNTIEGAFIYGANYKYITLGGNQAFDWGDPD PGFMFDDFAVYNKELSPEQIKQIMEDKTLALPTPVYINTFEEGTGDAKIVGSGKIVSVEDKGFGQIFQNVAGSKGTNYLM LPQDALSHSVESQEVSISVWVNAKNAGASDDYRYSPLFTAYGNEPSAGSENIWPLFVLQSRGLAQINCNGWTDFTAAQNE KGVNTVYCSEYAADGIVCEEDWLKDHEWHLYTAVLTSTTCKIYIDGEVANSWTVSGSGDGNTISGIFTNGADLKYISLGG NQAWTWADPDPGFMFDDIAIYNKALTIDEIQAIMKKKKN >Mature_758_residues AILTVLSMSSCQDWGEADPPAGNQKLPAKPDTSAKLIAEFTFDEDFNSTATEGKTPISGEGFAYSADQEIPEIVQDDERE SGVMHANGGYLRIPNPLIGADIQTGVSFSFFVKSTKTDHTGALISFSDGTNKLYFTANAFLSYTGTGGYLDVNDPEVSVT NAMPYGTWHYVALTFTEKGYAIYIDGTKKYDTNNHASISSGKTRAVSVGDFDYSNMIDLLSSATYIYLGYGSDTETAEAY YDDLKIWTNTFSDSDAQGPNIGSGIHVPDPVYKATFETTTGLQIIGGGSFVTDDNSAFGTVFKNIPGGMRQNYLLLPEDV MSHSAETKEMSIGMWVNAKDAGISSTYMWSPLFSAHGQAPGIAGTANTDNWPMFALYVRGTLQLNNAGWCNFDDAQNVNG TNALYHDATDWLADHGWHYYTVTLTATSAKVYMDGELKNEWQVAGTGDNNTIEGAFIYGANYKYITLGGNQAFDWGDPDP GFMFDDFAVYNKELSPEQIKQIMEDKTLALPTPVYINTFEEGTGDAKIVGSGKIVSVEDKGFGQIFQNVAGSKGTNYLML PQDALSHSVESQEVSISVWVNAKNAGASDDYRYSPLFTAYGNEPSAGSENIWPLFVLQSRGLAQINCNGWTDFTAAQNEK GVNTVYCSEYAADGIVCEEDWLKDHEWHLYTAVLTSTTCKIYIDGEVANSWTVSGSGDGNTISGIFTNGADLKYISLGGN QAWTWADPDPGFMFDDIAIYNKALTIDEIQAIMKKKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82669; Mature: 82537
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILTVLSMSSCQDWGEADPPAGNQKLPAKPDTSAKLIAEFTFDEDFNSTATEGKTPISG CEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC EGFAYSADQEIPEIVQDDERESGVMHANGGYLRIPNPLIGADIQTGVSFSFFVKSTKTDH CCEEECCCCCCHHHHCCCCHHCCEEECCCCEEECCCCCCCCCHHCCCEEEEEEEECCCCC TGALISFSDGTNKLYFTANAFLSYTGTGGYLDVNDPEVSVTNAMPYGTWHYVALTFTEKG CCEEEEECCCCCEEEEEEEEEEEECCCCCEEECCCCCEEEECCCCCCCEEEEEEEEECCC YAIYIDGTKKYDTNNHASISSGKTRAVSVGDFDYSNMIDLLSSATYIYLGYGSDTETAEA EEEEECCCEECCCCCCCEECCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCHHHH YYDDLKIWTNTFSDSDAQGPNIGSGIHVPDPVYKATFETTTGLQIIGGGSFVTDDNSAFG HHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEEEECCEEEECCCCHHH TVFKNIPGGMRQNYLLLPEDVMSHSAETKEMSIGMWVNAKDAGISSTYMWSPLFSAHGQA HHHHHCCCCCCCCEEECCHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEECCHHHCCCCC PGIAGTANTDNWPMFALYVRGTLQLNNAGWCNFDDAQNVNGTNALYHDATDWLADHGWHY CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCEEE YTVTLTATSAKVYMDGELKNEWQVAGTGDNNTIEGAFIYGANYKYITLGGNQAFDWGDPD EEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCC PGFMFDDFAVYNKELSPEQIKQIMEDKTLALPTPVYINTFEEGTGDAKIVGSGKIVSVED CCCEECCHHEECCCCCHHHHHHHHCCCCEECCCCEEEEEECCCCCCEEEEECCCEEEECC KGFGQIFQNVAGSKGTNYLMLPQDALSHSVESQEVSISVWVNAKNAGASDDYRYSPLFTA CCHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEE YGNEPSAGSENIWPLFVLQSRGLAQINCNGWTDFTAAQNEKGVNTVYCSEYAADGIVCEE CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCEEECH DWLKDHEWHLYTAVLTSTTCKIYIDGEVANSWTVSGSGDGNTISGIFTNGADLKYISLGG HHCCCCCEEEEEEEEECCEEEEEECCEECCEEEEECCCCCCEEEEEEECCCCEEEEEECC NQAWTWADPDPGFMFDDIAIYNKALTIDEIQAIMKKKKN CEEEEECCCCCCEEECCHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AILTVLSMSSCQDWGEADPPAGNQKLPAKPDTSAKLIAEFTFDEDFNSTATEGKTPISG EEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC EGFAYSADQEIPEIVQDDERESGVMHANGGYLRIPNPLIGADIQTGVSFSFFVKSTKTDH CCEEECCCCCCHHHHCCCCHHCCEEECCCCEEECCCCCCCCCHHCCCEEEEEEEECCCCC TGALISFSDGTNKLYFTANAFLSYTGTGGYLDVNDPEVSVTNAMPYGTWHYVALTFTEKG CCEEEEECCCCCEEEEEEEEEEEECCCCCEEECCCCCEEEECCCCCCCEEEEEEEEECCC YAIYIDGTKKYDTNNHASISSGKTRAVSVGDFDYSNMIDLLSSATYIYLGYGSDTETAEA EEEEECCCEECCCCCCCEECCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCHHHH YYDDLKIWTNTFSDSDAQGPNIGSGIHVPDPVYKATFETTTGLQIIGGGSFVTDDNSAFG HHHCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEEEECCEEEECCCCHHH TVFKNIPGGMRQNYLLLPEDVMSHSAETKEMSIGMWVNAKDAGISSTYMWSPLFSAHGQA HHHHHCCCCCCCCEEECCHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEECCHHHCCCCC PGIAGTANTDNWPMFALYVRGTLQLNNAGWCNFDDAQNVNGTNALYHDATDWLADHGWHY CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCEEE YTVTLTATSAKVYMDGELKNEWQVAGTGDNNTIEGAFIYGANYKYITLGGNQAFDWGDPD EEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCC PGFMFDDFAVYNKELSPEQIKQIMEDKTLALPTPVYINTFEEGTGDAKIVGSGKIVSVED CCCEECCHHEECCCCCHHHHHHHHCCCCEECCCCEEEEEECCCCCCEEEEECCCEEEECC KGFGQIFQNVAGSKGTNYLMLPQDALSHSVESQEVSISVWVNAKNAGASDDYRYSPLFTA CCHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEE YGNEPSAGSENIWPLFVLQSRGLAQINCNGWTDFTAAQNEKGVNTVYCSEYAADGIVCEE CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCEEECH DWLKDHEWHLYTAVLTSTTCKIYIDGEVANSWTVSGSGDGNTISGIFTNGADLKYISLGG HHCCCCCEEEEEEEEECCEEEEEECCEECCEEEEECCCCCCEEEEEEECCCCEEEEEECC NQAWTWADPDPGFMFDDIAIYNKALTIDEIQAIMKKKKN CEEEEECCCCCCEEECCHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA