| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345529
Identifier: 29345529
GI number: 29345529
Start: 109828
End: 110271
Strand: Reverse
Name: 29345529
Synonym: BT_0119
Alternate gene names: NA
Gene position: 110271-109828 (Counterclockwise)
Preceding gene: 29345530
Following gene: 29345528
Centisome position: 1.76
GC content: 34.91
Gene sequence:
>444_bases ATGAAGAAGTTATTTTATCTACTGATTGCAACAATCGTTTTAATTTCCTGTGGTAATGGTTCAAAGAATAAAACAGAAAC CAGCATAGCAAAAGAAAATCAAACTAACCGTGTTGAAGTTCTATATTTTCACGGTGCGCAACGTTGCATAACCTGCCGGG CAATAGAAGCCAATACGGTAGCTCTTTTAGATAGCCTTTATTCCAAAGAACAGGCGGACGGTAAAATCATCTTCAAGGTG ATAGATATATCCAAAAAGGAAAATGAGCAAATTGCAGATAAATACGAAGTTACATGGTCGTCTTTGTTTGTGAATGGCTG GAAAGACAGTAAAGAGAATGTAAATAACATGACGGAGTTTAGTTTCTCCAATGCAAGAAATGAACCGGATAAATTTAAAG AGGGAATAAAAAACAAGATTGACGAATTACTAAAAACATTGTAA
Upstream 100 bases:
>100_bases AGTCTCCCGGCTTTGGTTATTGATGGTAAAGTCATATCTGCCGGAAAAAGATTATCCTTATCAGAAGTGAAAGAATTGAT AACTAAATAAATTATTTACT
Downstream 100 bases:
>100_bases GATGGACTTTCTTCAATCACTATTAGACAATAGTTCTATTCCTGCTATTACAGCCTTTATCTTAGGGACTTTAACGGCAG TTAGCCCTTGTCCTTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKLFYLLIATIVLISCGNGSKNKTETSIAKENQTNRVEVLYFHGAQRCITCRAIEANTVALLDSLYSKEQADGKIIFKV IDISKKENEQIADKYEVTWSSLFVNGWKDSKENVNNMTEFSFSNARNEPDKFKEGIKNKIDELLKTL
Sequences:
>Translated_147_residues MKKLFYLLIATIVLISCGNGSKNKTETSIAKENQTNRVEVLYFHGAQRCITCRAIEANTVALLDSLYSKEQADGKIIFKV IDISKKENEQIADKYEVTWSSLFVNGWKDSKENVNNMTEFSFSNARNEPDKFKEGIKNKIDELLKTL >Mature_147_residues MKKLFYLLIATIVLISCGNGSKNKTETSIAKENQTNRVEVLYFHGAQRCITCRAIEANTVALLDSLYSKEQADGKIIFKV IDISKKENEQIADKYEVTWSSLFVNGWKDSKENVNNMTEFSFSNARNEPDKFKEGIKNKIDELLKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16763; Mature: 16763
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFYLLIATIVLISCGNGSKNKTETSIAKENQTNRVEVLYFHGAQRCITCRAIEANTV CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCHHH ALLDSLYSKEQADGKIIFKVIDISKKENEQIADKYEVTWSSLFVNGWKDSKENVNNMTEF HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH SFSNARNEPDKFKEGIKNKIDELLKTL HHCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLFYLLIATIVLISCGNGSKNKTETSIAKENQTNRVEVLYFHGAQRCITCRAIEANTV CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCHHH ALLDSLYSKEQADGKIIFKVIDISKKENEQIADKYEVTWSSLFVNGWKDSKENVNNMTEF HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH SFSNARNEPDKFKEGIKNKIDELLKTL HHCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA