Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345493

Identifier: 29345493

GI number: 29345493

Start: 78109

End: 78975

Strand: Reverse

Name: 29345493

Synonym: BT_0083

Alternate gene names: NA

Gene position: 78975-78109 (Counterclockwise)

Preceding gene: 29345494

Following gene: 29345492

Centisome position: 1.26

GC content: 31.14

Gene sequence:

>867_bases
ATGGCTTCTTTTGATTTCAACCCAATAGCGGATTATGTGGTACTAAAATTCAAGTGTCCTGAATGTGGTACTGAAAATGA
AACAGATGCACTTTCTGTTCCTACGCCTGATTTTGCAGCAGAAAATCATCGAGATAGTTGCAATTATGATGAGTATGAAC
ATGAATGTTCAAATTGTGGACATATATTTGACATAACAATAAATAATGGAATATATGGAGGCGATGGGGAAATATCAGAC
GTAGATGATGTTTCGGTAGAAGAGGAGTTTCCAGAGGATGATTACTATGAAGAATTTAAATCATCGTTCTTTGATGAACA
TGTTGTAGAAACAATTGATGTTTTAGATAAAATAGATGCCTTAGACGAGATTTCACGTAAATTATTGTACCGTACTTTAT
ATGCTAATGTTATCAGTAGTATGGAAGCATATTTGAGTGATAGACTTATTCAAAAAGTATTGTCTTCAGAAGATAATAAA
CGGCTATTTGTAGAAAACTTTAAGGACTTCAACGACTCTAAAATATCTATCTCAGATATTTTTAAGCAAATGGAAAATTT
GGATTCCTATATAAAAAAGACATTACGTGATATTATATATCATAATCTTCCTCGTGTTAAGAACATCTATAAAACAACTT
TAAGCGTTGATTTAGGTGATGTGTCTGAATTAATGAAATGCATTAGTATTCGCCATGATATAGTTCATCGAAATGGCAAG
GATAAAAATGGAAATCTTCGTGATATTAGCAAGGATGATGTTTCAATATTGGCTCAGAAAGTTTCTGATTTTATTCAAAA
TATAGAGAACCAATTTCTTATGCAGTCAATAGATGATTCAGAAATAGATTCACTTTTTAACTTATAA

Upstream 100 bases:

>100_bases
TTTTGTGTAAATGTGTTAAGAAACATTCAGCAATATATTGTTGAGTGTTTCTTTTTATCTACTTTTGTATAAAAGTTTAA
GTATTAAAAATGAATTATAT

Downstream 100 bases:

>100_bases
ACAATAAAACAAGGCTGACATTATCAATCTTGTTTTATATGATGTCTCCAGTGTGAAACTCAAAAATACAGTTATGCCAA
ACATTGATAATGTATTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCGHIFDITINNGIYGGDGEISD
VDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDALDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNK
RLFVENFKDFNDSKISISDIFKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK
DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL

Sequences:

>Translated_288_residues
MASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCGHIFDITINNGIYGGDGEISD
VDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDALDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNK
RLFVENFKDFNDSKISISDIFKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK
DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL
>Mature_287_residues
ASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCGHIFDITINNGIYGGDGEISDV
DDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDALDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNKR
LFVENFKDFNDSKISISDIFKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGKD
KNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33182; Mature: 33051

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCG
CCCCCCCCHHCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCC
HIFDITINNGIYGGDGEISDVDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDA
CEEEEEECCCEECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNKRLFVENFKDFNDSKISISDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEEHHHH
FKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
ASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCG
CCCCCCCHHCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCC
HIFDITINNGIYGGDGEISDVDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDA
CEEEEEECCCEECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNKRLFVENFKDFNDSKISISDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEEHHHH
FKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA