| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345493
Identifier: 29345493
GI number: 29345493
Start: 78109
End: 78975
Strand: Reverse
Name: 29345493
Synonym: BT_0083
Alternate gene names: NA
Gene position: 78975-78109 (Counterclockwise)
Preceding gene: 29345494
Following gene: 29345492
Centisome position: 1.26
GC content: 31.14
Gene sequence:
>867_bases ATGGCTTCTTTTGATTTCAACCCAATAGCGGATTATGTGGTACTAAAATTCAAGTGTCCTGAATGTGGTACTGAAAATGA AACAGATGCACTTTCTGTTCCTACGCCTGATTTTGCAGCAGAAAATCATCGAGATAGTTGCAATTATGATGAGTATGAAC ATGAATGTTCAAATTGTGGACATATATTTGACATAACAATAAATAATGGAATATATGGAGGCGATGGGGAAATATCAGAC GTAGATGATGTTTCGGTAGAAGAGGAGTTTCCAGAGGATGATTACTATGAAGAATTTAAATCATCGTTCTTTGATGAACA TGTTGTAGAAACAATTGATGTTTTAGATAAAATAGATGCCTTAGACGAGATTTCACGTAAATTATTGTACCGTACTTTAT ATGCTAATGTTATCAGTAGTATGGAAGCATATTTGAGTGATAGACTTATTCAAAAAGTATTGTCTTCAGAAGATAATAAA CGGCTATTTGTAGAAAACTTTAAGGACTTCAACGACTCTAAAATATCTATCTCAGATATTTTTAAGCAAATGGAAAATTT GGATTCCTATATAAAAAAGACATTACGTGATATTATATATCATAATCTTCCTCGTGTTAAGAACATCTATAAAACAACTT TAAGCGTTGATTTAGGTGATGTGTCTGAATTAATGAAATGCATTAGTATTCGCCATGATATAGTTCATCGAAATGGCAAG GATAAAAATGGAAATCTTCGTGATATTAGCAAGGATGATGTTTCAATATTGGCTCAGAAAGTTTCTGATTTTATTCAAAA TATAGAGAACCAATTTCTTATGCAGTCAATAGATGATTCAGAAATAGATTCACTTTTTAACTTATAA
Upstream 100 bases:
>100_bases TTTTGTGTAAATGTGTTAAGAAACATTCAGCAATATATTGTTGAGTGTTTCTTTTTATCTACTTTTGTATAAAAGTTTAA GTATTAAAAATGAATTATAT
Downstream 100 bases:
>100_bases ACAATAAAACAAGGCTGACATTATCAATCTTGTTTTATATGATGTCTCCAGTGTGAAACTCAAAAATACAGTTATGCCAA ACATTGATAATGTATTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCGHIFDITINNGIYGGDGEISD VDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDALDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNK RLFVENFKDFNDSKISISDIFKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL
Sequences:
>Translated_288_residues MASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCGHIFDITINNGIYGGDGEISD VDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDALDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNK RLFVENFKDFNDSKISISDIFKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL >Mature_287_residues ASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCGHIFDITINNGIYGGDGEISDV DDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDALDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNKR LFVENFKDFNDSKISISDIFKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGKD KNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33182; Mature: 33051
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCG CCCCCCCCHHCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCC HIFDITINNGIYGGDGEISDVDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDA CEEEEEECCCEECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNKRLFVENFKDFNDSKISISDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEEHHHH FKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure ASFDFNPIADYVVLKFKCPECGTENETDALSVPTPDFAAENHRDSCNYDEYEHECSNCG CCCCCCCHHCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCC HIFDITINNGIYGGDGEISDVDDVSVEEEFPEDDYYEEFKSSFFDEHVVETIDVLDKIDA CEEEEEECCCEECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDEISRKLLYRTLYANVISSMEAYLSDRLIQKVLSSEDNKRLFVENFKDFNDSKISISDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEEHHHH FKQMENLDSYIKKTLRDIIYHNLPRVKNIYKTTLSVDLGDVSELMKCISIRHDIVHRNGK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC DKNGNLRDISKDDVSILAQKVSDFIQNIENQFLMQSIDDSEIDSLFNL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA