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The map label for this gene is sthA [H]

Identifier: 29144861

GI number: 29144861

Start: 4787384

End: 4787929

Strand: Reverse

Name: sthA [H]

Synonym: t4634

Alternate gene names: 29144861

Gene position: 4787929-4787384 (Counterclockwise)

Preceding gene: 29144862

Following gene: 29144860

Centisome position: 99.92

GC content: 50.55

Gene sequence:

>546_bases
ATGTTTAATAAGAAAATTATCATCCTGGCAATGTTAACTGCCGTAGCATCCACACCGGTATTTGCCCAGAACACGATTAC
GTTCAATGGCAAAATTTACGATCAGGCGTGTACGGTTCAGGTTAATGGCTCCACGGATACCACCATTGATTTAGGTAATT
ACAGCAAAGAACGCATCGCGGAAAAAGGCGCCACAACCGATTACGTGCCGTTTACCGTAAGCCTGGTTAGCTGCCCGGAA
GCAGGGACTGGCGTACCGACCCAGGCCATGTTCCGCTTCCACGGCGCAACAGATGATTCCAACCCAACGTACTTCAAAAA
CGCGGACGAAGGATCGGAAACGGGCGCCGCGGGTGTCGGTATTTCTATTCAGAACGCTTCACATAGCGATGTGACAGATA
ACACGGATGATGCCGCAGTAAGCCTGCCAACCGACGGCTCGACAGCAGACTTTACCTATTACGCCGCCATGGCAAACGAT
GGTTCCGCAACCGTAACCGGTGGAGATGTTAGCACTCAGGTTACGTATACCGTTTCGTATCAGTAA

Upstream 100 bases:

>100_bases
ATCTACAGAACAGAAAGAAGCGCATACAGAGTAAAATATAATATTTTATTTTATATAGCTATCTTTATTTTTCAGCGAAT
AGAATCAGGCAACAATTAAT

Downstream 100 bases:

>100_bases
GGCATTCTCATCCTGATGTGGACAGGCAGGATGCCAGTCCATAGCGTAAAACATCTTTACAGAGTAAAAAATGAAACACA
TAAAGAAATCCGTGTTGGTC

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPE
AGTGVPTQAMFRFHGATDDSNPTYFKNADEGSETGAAGVGISIQNASHSDVTDNTDDAAVSLPTDGSTADFTYYAAMAND
GSATVTGGDVSTQVTYTVSYQ

Sequences:

>Translated_181_residues
MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPE
AGTGVPTQAMFRFHGATDDSNPTYFKNADEGSETGAAGVGISIQNASHSDVTDNTDDAAVSLPTDGSTADFTYYAAMAND
GSATVTGGDVSTQVTYTVSYQ
>Mature_181_residues
MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPE
AGTGVPTQAMFRFHGATDDSNPTYFKNADEGSETGAAGVGISIQNASHSDVTDNTDDAAVSLPTDGSTADFTYYAAMAND
GSATVTGGDVSTQVTYTVSYQ

Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790773, Length=184, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1787781, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18935; Mature: 18935

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIA
CCCCCEEHEEEHHHHHCCCEEECEEEEECCEEECCEEEEEECCCCCCEEECCCCCHHHHH
EKGATTDYVPFTVSLVSCPEAGTGVPTQAMFRFHGATDDSNPTYFKNADEGSETGAAGVG
HCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEEECCCCCCCCCEEECCCCCCCCCCCEEE
ISIQNASHSDVTDNTDDAAVSLPTDGSTADFTYYAAMANDGSATVTGGDVSTQVTYTVSY
EEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCEEEECCCCEEEEEEEEEE
Q
C
>Mature Secondary Structure
MFNKKIIILAMLTAVASTPVFAQNTITFNGKIYDQACTVQVNGSTDTTIDLGNYSKERIA
CCCCCEEHEEEHHHHHCCCEEECEEEEECCEEECCEEEEEECCCCCCEEECCCCCHHHHH
EKGATTDYVPFTVSLVSCPEAGTGVPTQAMFRFHGATDDSNPTYFKNADEGSETGAAGVG
HCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEEECCCCCCCCCEEECCCCCCCCCCCEEE
ISIQNASHSDVTDNTDDAAVSLPTDGSTADFTYYAAMANDGSATVTGGDVSTQVTYTVSY
EEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCEEEECCCCEEEEEEEEEE
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890081; 7610040; 9278503; 1970114 [H]