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The map label for this gene is sthD [C]

Identifier: 29144859

GI number: 29144859

Start: 4783473

End: 4784030

Strand: Reverse

Name: sthD [C]

Synonym: t4631

Alternate gene names: 29144859

Gene position: 4784030-4783473 (Counterclockwise)

Preceding gene: 29144860

Following gene: 29144854

Centisome position: 99.83

GC content: 49.64

Gene sequence:

>558_bases
ATGAATATGAACAGATTTGCTGCATTAGCCGCCCTGTTAACGTTCACGGGTCTGGCATCATGGTCGCCCTCGATCAGCGC
GGCATACAATACCGCAGATGCCGTAGACATTAACGTTACGGGATTAATTTATGCCGATCCGTGTACCGTGACGGTACCTG
ACACGATCTCTCTTGGGCAATATGCCCGGGCGGATATCGCTGTGGCCGGTGGCAATACCGCCACCATTCCTTTCACCATA
AAAATGACGAATTGCCCGGCAACGACCACAAAAGCCGCGATTTCATTTAACGGCGTACCTTATCCCGATCCGAATTATGC
TTCTGCGATTTACGCAAACAGCGCGGCCAATCCGGCGCAGGATTTAGGATTACAGCTTTTTAACCTGGACAGTAAAAGTC
TGGTTAATCTGGCCAATAACGTCACTTACACGGTGGATATCAACAGTAATACCCATGAAGCCAATTTGCCTGTCGCCGCA
AGGATGTATACCCCGTATGGAAAAGTCACGGCAGGGGATTTCACGTCCGTTGTGACGATCACTATCGCATGGCAATAA

Upstream 100 bases:

>100_bases
CAGACCGGTGTCAGGTCTCTTATCGTATACCGAGCTCCCCCTCCGCTTCTGGCGTAGAAATCTTACACGAGCAATGCCAG
TGATTCTGGTGGGATAAAAG

Downstream 100 bases:

>100_bases
TATTTTTCTATTTCACCTGATATAAAAGCAGGAATTTTTCATGAGAAGGTTATATCTGGCGCTTATTCTGCTGTTCGCGT
ATTCCGGTCATAGTTACGCC

Product: fimbrial subunit

Products: NA

Alternate protein names: Fimbrial Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNMNRFAALAALLTFTGLASWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDTISLGQYARADIAVAGGNTATIPFTI
KMTNCPATTTKAAISFNGVPYPDPNYASAIYANSAANPAQDLGLQLFNLDSKSLVNLANNVTYTVDINSNTHEANLPVAA
RMYTPYGKVTAGDFTSVVTITIAWQ

Sequences:

>Translated_185_residues
MNMNRFAALAALLTFTGLASWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDTISLGQYARADIAVAGGNTATIPFTI
KMTNCPATTTKAAISFNGVPYPDPNYASAIYANSAANPAQDLGLQLFNLDSKSLVNLANNVTYTVDINSNTHEANLPVAA
RMYTPYGKVTAGDFTSVVTITIAWQ
>Mature_185_residues
MNMNRFAALAALLTFTGLASWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDTISLGQYARADIAVAGGNTATIPFTI
KMTNCPATTTKAAISFNGVPYPDPNYASAIYANSAANPAQDLGLQLFNLDSKSLVNLANNVTYTVDINSNTHEANLPVAA
RMYTPYGKVTAGDFTSVVTITIAWQ

Specific function: Involved In Regulation Of Length And Mediation Of Adhesion Of Type 1 Fimbriae (But Not Necessary For The Production Of Fimbriae). Involved In The Integration Of Fimh In The Fimbriae. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19425; Mature: 19425

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMNRFAALAALLTFTGLASWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDTISLGQ
CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCEEECCCCCCCCC
YARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGVPYPDPNYASAIYANSAANPAQ
CCCEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCHH
DLGLQLFNLDSKSLVNLANNVTYTVDINSNTHEANLPVAARMYTPYGKVTAGDFTSVVTI
HCCEEEEECCCHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCEEEEEE
TIAWQ
EEEEC
>Mature Secondary Structure
MNMNRFAALAALLTFTGLASWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDTISLGQ
CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCEEECCCCCCCCC
YARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGVPYPDPNYASAIYANSAANPAQ
CCCEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCHH
DLGLQLFNLDSKSLVNLANNVTYTVDINSNTHEANLPVAARMYTPYGKVTAGDFTSVVTI
HCCEEEEECCCHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCEEEEEE
TIAWQ
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA