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The map label for this gene is smp [H]

Identifier: 29144846

GI number: 29144846

Start: 4767181

End: 4767825

Strand: Reverse

Name: smp [H]

Synonym: t4616

Alternate gene names: 29144846

Gene position: 4767825-4767181 (Counterclockwise)

Preceding gene: 29144850

Following gene: 29144845

Centisome position: 99.5

GC content: 56.74

Gene sequence:

>645_bases
ATGGCTCGCGCAAAACTGAAATTTCGGCTGCATCGTGCAGTCATTGTATTGTTCTGTCTCACACTGCTCGTCGCGCTCAT
GCAGGGCGCGTCCTGGTTTAGTCAAAACCACCAGCGACAGCGCAATCCACAGCTGGAAGAGCTGGCCCGCACGCTGGCGC
GCCAGGTGACGCTCAACATCGCCCCGCTGATGCGCAGCGAAACACCGGATGAAAATCGCATCAACGCCGTGCTGCGTCAG
CTCACGCAAGAGAGCCGTATTCTGGATGCCGGCGTCTATGATGAACAGGGCGATCTTATTACTCGCGCTGGCGAAAGCGT
CAACGTGCGCGACAGGCTGGCGCTGGATGGCAAAAAAGCGGGCAGCTATTTTAACCAACAAATTGTCGAGCCTATCCAGG
GGAAAAACGGCCCATTGGGCTACCTGCGTCTGACGCTGGATACCCACACTCTGGCCACCGAAGCAAAACAGGTCGATAAC
ACCACCAACATTCTACGCCTGATGCTGCTACTCTCGCTGGCGATAGGCGTGGTGCTGACGCGCACCTTGCTACAAGGTAA
ACGCACCCGCTGGCAGCAGTCACCCTTCCTGTTAACGGCCAGCAAGCCTGTTCCGGAAGAGGAAGAGCGTGAGGAAAAAG
AGTAA

Upstream 100 bases:

>100_bases
CGTTCAGGCCGGTAACCGCCCCGCGGAAAATAACGCATGAGGCTACCTTGTAACCATCGCTTCTGGCAACATTAAGCCTC
AAATTTTCAGCAGGTGGAAT

Downstream 100 bases:

>100_bases
AATGACGGCTTAATAAAGGTAAGGAAAACCACCATGACAACATTACGCCTGCTTATTTCTGACTCTTACGATCCCTGGTT
TAACCTGGCGGTCGAGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARAKLKFRLHRAVIVLFCLTLLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNIAPLMRSETPDENRINAVLRQ
LTQESRILDAGVYDEQGDLITRAGESVNVRDRLALDGKKAGSYFNQQIVEPIQGKNGPLGYLRLTLDTHTLATEAKQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEEREEKE

Sequences:

>Translated_214_residues
MARAKLKFRLHRAVIVLFCLTLLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNIAPLMRSETPDENRINAVLRQ
LTQESRILDAGVYDEQGDLITRAGESVNVRDRLALDGKKAGSYFNQQIVEPIQGKNGPLGYLRLTLDTHTLATEAKQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEEREEKE
>Mature_213_residues
ARAKLKFRLHRAVIVLFCLTLLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNIAPLMRSETPDENRINAVLRQL
TQESRILDAGVYDEQGDLITRAGESVNVRDRLALDGKKAGSYFNQQIVEPIQGKNGPLGYLRLTLDTHTLATEAKQVDNT
TNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEEREEKE

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family [H]

Homologues:

Organism=Escherichia coli, GI1790847, Length=205, Percent_Identity=91.7073170731707, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019305 [H]

Pfam domain/function: PF10144 SMP_2 [H]

EC number: NA

Molecular weight: Translated: 24279; Mature: 24148

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAKLKFRLHRAVIVLFCLTLLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
APLMRSETPDENRINAVLRQLTQESRILDAGVYDEQGDLITRAGESVNVRDRLALDGKKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHCCCHHH
GSYFNQQIVEPIQGKNGPLGYLRLTLDTHTLATEAKQVDNTTNILRLMLLLSLAIGVVLT
HHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTASKPVPEEEEREEKE
HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCC
>Mature Secondary Structure 
ARAKLKFRLHRAVIVLFCLTLLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
APLMRSETPDENRINAVLRQLTQESRILDAGVYDEQGDLITRAGESVNVRDRLALDGKKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHCCCHHH
GSYFNQQIVEPIQGKNGPLGYLRLTLDTHTLATEAKQVDNTTNILRLMLLLSLAIGVVLT
HHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTASKPVPEEEEREEKE
HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]