| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yjiG [H]
Identifier: 29144799
GI number: 29144799
Start: 4714216
End: 4714677
Strand: Reverse
Name: yjiG [H]
Synonym: t4563
Alternate gene names: 29144799
Gene position: 4714677-4714216 (Counterclockwise)
Preceding gene: 29144800
Following gene: 29144798
Centisome position: 98.39
GC content: 55.84
Gene sequence:
>462_bases ATGACGACTCAGGTACGTAAGAATGTCATGGATATGTTTATCGATGGCGCACGCCGCGGTTTTACCATCGCCACGACCAA CCTGTTACCCAATGTGGTCATGGCATTTGTCATTATTCAGGCGCTGAAAATTACCGGTCTGCTCGACTGGGTAGGCCATA TCTGCCAGCCCGTGATGGCGTTGTGGGGGCTTCCCGGCGAAGCGGCTACGGTGCTTCTGGCTTCGCTGATGAGTATGGGC GGCGCCGTTGGCGTGGCGGCCAGTCTGGCTACCGCCGGCGCGCTAAGCGGCCACGATGTTACCGTACTACTGCCAGCCAT TTACCTGATGGGAAACCCGGTACAGAATGTCGGCCGCTGTCTCGGTACTGCCGAAGTCAACGCCAAATATTACCCGCATA TTATCGCAGTCTGCGCCATCAATGCGCTGCTGTCGATCTGGGTCATGCAGCTTATTGTTTAA
Upstream 100 bases:
>100_bases CGCTGGTGGTCATTCTGCTATTCAAATTTATCGGCGCAAACCTTTTGCGCATCTGGATTAACATCGAAGAACGCCGTCAC CCTGCGCAAGGAGCCCAATC
Downstream 100 bases:
>100_bases TAAGGAGTTATCATGCCTGATTTATCCGCCGCGGAGTTTACCTTGTTACAGGGTGCGCACCTGTTTGCGCCAGAAGACCG GGGCATCTGCGATGTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICQPVMALWGLPGEAATVLLASLMSMG GAVGVAASLATAGALSGHDVTVLLPAIYLMGNPVQNVGRCLGTAEVNAKYYPHIIAVCAINALLSIWVMQLIV
Sequences:
>Translated_153_residues MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICQPVMALWGLPGEAATVLLASLMSMG GAVGVAASLATAGALSGHDVTVLLPAIYLMGNPVQNVGRCLGTAEVNAKYYPHIIAVCAINALLSIWVMQLIV >Mature_152_residues TTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICQPVMALWGLPGEAATVLLASLMSMGG AVGVAASLATAGALSGHDVTVLLPAIYLMGNPVQNVGRCLGTAEVNAKYYPHIIAVCAINALLSIWVMQLIV
Specific function: Unknown
COG id: COG0700
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spmB family [H]
Homologues:
Organism=Escherichia coli, GI1790785, Length=153, Percent_Identity=96.078431372549, Blast_Score=298, Evalue=9e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 16119; Mature: 15987
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICQPVMA CCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWGLPGEAATVLLASLMSMGGAVGVAASLATAGALSGHDVTVLLPAIYLMGNPVQNVGRC HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHH LGTAEVNAKYYPHIIAVCAINALLSIWVMQLIV HCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICQPVMA CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWGLPGEAATVLLASLMSMGGAVGVAASLATAGALSGHDVTVLLPAIYLMGNPVQNVGRC HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHH LGTAEVNAKYYPHIIAVCAINALLSIWVMQLIV HCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]