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The map label for this gene is yhjS [H]

Identifier: 29144168

GI number: 29144168

Start: 4021827

End: 4023398

Strand: Reverse

Name: yhjS [H]

Synonym: t3895

Alternate gene names: 29144168

Gene position: 4023398-4021827 (Counterclockwise)

Preceding gene: 29144177

Following gene: 29144167

Centisome position: 83.96

GC content: 52.67

Gene sequence:

>1572_bases
ATGAGGGACACTGTGGACCCCGTATTTTCTCTCGGCATCTCATCATTATGGGATGAACTGCGCCATATGCCAACCGGCGG
CGTCTGGTGGGTTAACGCCGATCGCCAGCAAGATGCCATCAGCCTGGTGAATCAAACGATTGCGTCACAAACGGAGAATG
CAAATGTCGCCGTCATCGGCATGGAAGGCGATCCTGGCAAAGTAATCAAATTAGATGAATCTCACGGTCCGGAGAAAATC
CGCTTATTTACCATGCCGGATTCAGAAAAAGGGCTATACTCTTTGCCCCACGATTTGCTTTGTTCTGTTAACCCGACGCA
TTACTTTTTCATTCTTATTTGTGCAAATAACACGTGGCGGAATATAACGTCAGAAAGCCTGCATAAATGGCTGGAAAAAA
TGAATAAATGGACTCGTTTTCATCACTGTTCATTGTTGGTTATTACCCCTTGTAATAATAGTGATAAACAGTCCTCGTTG
TTGATGGGCGAGTATCGCTCACTTTTCGGCCTCGCCAGTTTACGTTTTCAGGGCGACCAACATTTGTTCGATATTGCCTT
CTGGTGTAACGAAAAAGGCGTCAGCGCCCGACAGCAGTTATTGCTATGTCAGCAGGACGAACGCTGGACGCTATCCCATC
AGGAGGAGACGGCAATTCAGCCGCGTAGCGACGAAAAACGCATTCTTAGCCACGTCGCCGTCCTTGAAGGCGCGCCGCCG
CTCTCGGAACACTGGACGCTTTTCGACAATAACGAAGCGCTATTCAACGACGCGCGCACGGCGCAGGCCGCGACAATTAT
TTTTTCGCTTACACAGAACAACCAAATCGAACCGCTTGCTCGTCGCATTCATACTTTGCGACGCCAGCGGGGAAGCGCGC
TGAAAATTGTCGTGCGCGAAAATATCGCCAGTTTGCGCGCCACCGATGAGCGCCTGCTGCTGGGCTGCGGCGCGAATATG
ATCATTCCCTGGAACGCCCCGCTTTCACGCTGTCTGACGCTTATTGAAAGCGTGCAGGGGCAGCAGTTCAGCCGTTACGT
ACCGGAAGACATCACCACGCTACTGTCGATGACGCAACCGTTGAAACTGCGCGGTTTTCAGCCGTGGGATACCTTTTGCG
ATGCCATCCATACGATGATGAGCAACACCCTGCTCCCCGCCGACGGGAAAGGCGTTCTGGTCGCGCTGCGCCCGGTGCCG
GGCATTCGGGTTGAGCAGGCGTTAACATTATGTCGACCAAGCCGAACCGGCGATATTATGACCATCGGCGGCAACCGTCT
GGTGCTGTTTTTATCATTCTGCCGGGTCAACGATCTGGATACCGCGTTAAACCATATTTTCCCTTTGCCGACAGGCGATA
TTTTCTCTAATCGTATGGTCTGGTTCGAAGATAAACAAATCAGCGCCGAGCTGGTGCAGATGCGCTTATTGTCGCCGGAA
CTGTGGGGAACGCCGCTACCGCTGGCAAAACGCGCCGACCCGGTAATAAATGCCGAACACGATGGCCGCATCTGGCGTCG
TATTCCTGAACCCCTGCGATTGCTCGACGACACCGCGGAGCGTGCATCATGA

Upstream 100 bases:

>100_bases
ACAAATTGATTCACATGCTAAATCTGATGCGTTTTAATTTCAATGTTAGGTTTATTTCTGTGCTTTCGCTAGTAAACTGA
TAAACAGTTAAAATAGTGAC

Downstream 100 bases:

>100_bases
TGACCATCAGCGATATCGTGCAAATTATTCTTTTTTGCGCGCTGATTTTCTTTCCGCTGGGGTATCTGGCGCGTCATTCG
CTACGCCGTATCAGTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKI
RLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSL
LMGEYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPP
LSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANM
IIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVP
GIRVEQALTLCRPSRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPE
LWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS

Sequences:

>Translated_523_residues
MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKI
RLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSL
LMGEYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPP
LSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANM
IIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVP
GIRVEQALTLCRPSRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPE
LWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS
>Mature_523_residues
MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKI
RLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSL
LMGEYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPP
LSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANM
IIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVP
GIRVEQALTLCRPSRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPE
LWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789958, Length=523, Percent_Identity=79.7323135755258, Blast_Score=881, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017745 [H]

Pfam domain/function: PF10995 DUF2819 [H]

EC number: NA

Molecular weight: Translated: 59268; Mature: 59268

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIG
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE
MEGDPGKVIKLDESHGPEKIRLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWR
ECCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCEEEEEEEECCCCCC
NITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSLLMGEYRSLFGLASLRFQGDQ
CCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
HLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPP
EEEEEEEEECCCCCCHHHHHHEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCC
LSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRE
CCCCEEEEECCHHHHCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEHH
NIASLRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQP
HHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
LKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRVEQALTLCRPSRTGDIM
HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEE
TIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPE
EECCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHCCHH
LWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS
HCCCCCCCHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDTVDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIG
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE
MEGDPGKVIKLDESHGPEKIRLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWR
ECCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCEEEEEEEECCCCCC
NITSESLHKWLEKMNKWTRFHHCSLLVITPCNNSDKQSSLLMGEYRSLFGLASLRFQGDQ
CCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
HLFDIAFWCNEKGVSARQQLLLCQQDERWTLSHQEETAIQPRSDEKRILSHVAVLEGAPP
EEEEEEEEECCCCCCHHHHHHEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCC
LSEHWTLFDNNEALFNDARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRE
CCCCEEEEECCHHHHCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEHH
NIASLRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQP
HHHHHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
LKLRGFQPWDTFCDAIHTMMSNTLLPADGKGVLVALRPVPGIRVEQALTLCRPSRTGDIM
HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEE
TIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPE
EECCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHCCHH
LWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRLLDDTAERAS
HCCCCCCCHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]