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The map label for this gene is yicH [H]

Identifier: 29144052

GI number: 29144052

Start: 3890146

End: 3891855

Strand: Reverse

Name: yicH [H]

Synonym: t3771

Alternate gene names: 29144052

Gene position: 3891855-3890146 (Counterclockwise)

Preceding gene: 29144053

Following gene: 29144048

Centisome position: 81.22

GC content: 55.61

Gene sequence:

>1710_bases
ATGAAATTGATTGGGAGGTTGCTTCTCTACGTGCTGATCGCCTGTTTAGTGGTGATTTTCGGCTTTTATTTTCTGCTGCA
AACGCGCTGGGGCGCAGATCATGTCAGCAACTGGGTATCAGAGAACAGCGGCTATCACCTCACATTCGACGTGATGGATC
ATCGTTTTTCCGCCCCATCCCATCTTTTACTGGAGAATGTGACCTTTGGTCGTGATGGTCAGCCTGCTACCCTGGTCGCG
AAAACCGTAGATATCGGTCTGAGCATTCGCCAGTTAACCGCGCCGCTGCATGTCGACACGATTCTGTTACAGGACGGCAC
GCTGAATATTTCAGTGCAAACCGCCCCTTTCCCGTTTGAGGCCGACCGCCTGCAACTTCGCAATATGGCGCTCAATAGTC
CCGGCAGCGAATGGCGGTTGAGCGCCCAGCGCGTTAACGGCGGCGTTATGCCCTGGCGCCCCGAAGCCGGTCGGGTATTG
GGCAATAAAGCCCAGATCCAACTGAGCGCCGGTTCGCTGACGTTAAACGACGTTCCCGCCACGAATGTGCTTATTGAAGG
CAGTATTGACCATGATCAGATGATGTTAAACACCGTCGGCGCCGATATGGCGCGCGGAGCGTTAACCGGCGTCGCCCGGC
GTAACGCTGATGGTAGTTGGGTCGTTGAAAATCTGCGGCTGAATGATATCCGGTTACAAAGCGATAAATCCCTGAGCGAG
TTTTTCGCGCCGCTTACTACGGTTCCATCTTTGCAGATTGGTCGTCTTGAAGTGACGGACTCCAGCCTGCAAGGACCAGA
CTGGGCAGTCACCGATCTTGACCTGAGTTTGCGCAATCTGACTCTGCGCAAAGAAGACTGGCAAAGTCAGGAAGGTAAAT
TATCGATGAATGCCAGCGAGTTTATTTACGGCTCGCTGCACTTGCTCGATCCAATCCTGAACGCCGAATTTTCACCACAG
GGCGTTGCGCTACGCCAGTTCACCACCCGCTGGGAAGGCGGTATGGTCAGAACCTCCGGCGCCTGGTTACGCGAGAGCAA
AGCGCTGATTCTGGACGATACCGCTATCGCCGGGCTGGAGTATACGCTGCCGGAAAACTGGAAGCAGTTATGGATGAAGC
CGTTGCCCGACTGGCTGAACAGCCTGACGCTGAAAAAATTCAGCGCCAGCCGCAATCTGGTGATCGATATCGACCCGACC
TTCCCGTGGCAAATCACCGCTCTGGACGGCTACGGCGCAAACCTGGAGCTGGTACAACATCATCAATGGGGCGTCTGGAG
CGGCAATGCGACCCTCAACGCCGCAGCGGCAACCTTTAACCGTGTGGACGTGCGCCGCCCGTCGCTGTCGTTGACGGCGA
ATGCCAGCACGGTCAACATCAGTGATCTGAGCGCGTTTACTGAAAAAGGGATACTGGAAGCCACTGCCAGCGTATCACAA
CAGCCGCAGCGTCAGACGCAAATCAGCCTGAACGGACGCGGCGTACCAATGGATGTGCTACAACAGTGGGGCTGGCCGGC
ATTACCGATTGCTGGCGATGGCAATATTCAGTTCACGGCCAGCGGCAATATTCAGGCCGATGCGCCGTTGAAACCGACGG
TAAACGGGCAATTACACGCGGTCAACGCACAAAAGCAGCAGATAATGCAAACGATGCAAGCGGGTGTGGTGTCCGGCGGG
GAAGTTACGTCAACGGAGCCAGCGCTGTAA

Upstream 100 bases:

>100_bases
GATTCGCCGCTGCTGTAACGCTCTTTCACCATTCCTGTCTTGAGGATTGCACGCAAATCGTGCATAAATCCCCTATGTGC
ATTTCACGGGATGGAAGACC

Downstream 100 bases:

>100_bases
TTGAGGGCTTGCCCGGTGGCGCTGGCGCTTACCGGGCTTACGGTTCTTGCTCATTTGTAGGCCGGATAAGCGCAGCTCAC
GGCGCCATCCGGCGATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVA
KTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHDQMMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQ
GVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPT
FPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTEKGILEATASVSQ
QPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQFTASGNIQADAPLKPTVNGQLHAVNAQKQQIMQTMQAGVVSGG
EVTSTEPAL

Sequences:

>Translated_569_residues
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVA
KTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHDQMMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQ
GVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPT
FPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTEKGILEATASVSQ
QPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQFTASGNIQADAPLKPTVNGQLHAVNAQKQQIMQTMQAGVVSGG
EVTSTEPAL
>Mature_569_residues
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVA
KTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHDQMMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQ
GVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPT
FPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTEKGILEATASVSQ
QPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQFTASGNIQADAPLKPTVNGQLHAVNAQKQQIMQTMQAGVVSGG
EVTSTEPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=567, Percent_Identity=79.8941798941799, Blast_Score=927, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 62388; Mature: 62388

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC
HLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFE
CEEEECCCCCCCCCCCEEEEEEHCCCCEEEHHCCCEEEEEEEEECCEEEEEEEECCCCCC
ADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPA
HHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCC
TNVLIEGSIDHDQMMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
CEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHH
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASE
HHHHHHCCCCCEECEEEEECCCCCCCCEEEEEECEEEEEEEEECCCCCCCCCEEECCHHH
FIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLE
HEEEHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEECCCHHCCCCEEEEECCEECCEE
YTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPTFPWQITALDGYGANLELVQH
ECCCHHHHHHHHHHCHHHHHHHHEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEEE
HQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTEKGILEATASVSQ
CCCCEEECCCEEEEHHHHHHHEEEECCCEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHC
QPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQFTASGNIQADAPLKPTVNGQLHA
CCCHHCEEEECCCCCCHHHHHHCCCCCEEEECCCCEEEEECCCEEECCCCCCCCCCEEEE
VNAQKQQIMQTMQAGVVSGGEVTSTEPAL
ECHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC
HLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFE
CEEEECCCCCCCCCCCEEEEEEHCCCCEEEHHCCCEEEEEEEEECCEEEEEEEECCCCCC
ADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPA
HHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCC
TNVLIEGSIDHDQMMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
CEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHH
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASE
HHHHHHCCCCCEECEEEEECCCCCCCCEEEEEECEEEEEEEEECCCCCCCCCEEECCHHH
FIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLE
HEEEHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEECCCHHCCCCEEEEECCEECCEE
YTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPTFPWQITALDGYGANLELVQH
ECCCHHHHHHHHHHCHHHHHHHHEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEEE
HQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTEKGILEATASVSQ
CCCCEEECCCEEEEHHHHHHHEEEECCCEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHC
QPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQFTASGNIQADAPLKPTVNGQLHA
CCCHHCEEEECCCCCCHHHHHHCCCCCEEEECCCCEEEEECCCEEECCCCCCCCCCEEEE
VNAQKQQIMQTMQAGVVSGGEVTSTEPAL
ECHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]