| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144047
Identifier: 29144047
GI number: 29144047
Start: 3882030
End: 3883013
Strand: Reverse
Name: 29144047
Synonym: t3764
Alternate gene names: NA
Gene position: 3883013-3882030 (Counterclockwise)
Preceding gene: 29144048
Following gene: 29144046
Centisome position: 81.03
GC content: 50.1
Gene sequence:
>984_bases ATGTTTGCCAGCGGTGACGGGAAAGTGCGTGTTGAATGCCGCTTTGAAAGCAATACACTGTGGCTCTCTCAGGGAATGAT CTGCGAACTATACGGTAAAGCTAAAGCCACCATCAGTGAGCATATAAAGAACATCTTTGCAGATGGCGAGCTTGAAGAAA ATTCAGTTGTTCGGTTTTACCGAACAACTGCCAGTGATGGGAAAAATTATCAGATTCAATACTTTAGTTTGCCGTTGATA CTCGCTGTCGGCTACCGCGTTCGCTCCCCGCGCGGCACGCAGTTCCGCCAGTGGGCAACCCAGACGCTCCAGGAATACCT GATCAAAGGTTTTGTGATGGACGATGAGCGCCTGAAAAATCCGCCCGTGGGTTCATCGGCTGTACCCGACTATTTCGATG AGATGCTGGAGCGTATCCGCGATATCCGCGCCAGCGAACGTCGGGTTTATTTGCGGGTACGCGAGATCTTTGCTCTGGCC GCCGATTATCAACCGTCCCTCAAAGAAACCACGCAGTTTTTTCAAACCATCCAGAACAAGTTACATTTTGCCTGTACCGG GTATACCGCCGCTGAACTCATTCATCAGCGTGCTGACGCCTGCCAGCCGCATATGGGGCTGACCAGCTATAAAGGTGAAG AGGTGCGCAAATGTGACGTGACGGTGGCAAAAAATTATCTCACTCAGGATGAAGTCAGCGAGCTTAACCGCGTAGTTAAC ATGTGGCTGGATTTCGCCGAAGATCAGGCCCGTCGTCGTCAACAGGTCTTTTTACGCGACTGGCAGGATAAGCTGGATCA GTTCCTGCAATTTAACGACCGTGAGGTTTTGCAAGGGGCAGGTAAAGTCAGTAAGAAAATGGCCGATGAAAAAGCGCAGG CGGAATATAGCCAGTTTGCCGAGCAACAACGGCGTTTAAAAGAAGCCGAAGGTGAGAAAGATATCGCCGCTTTGTTACAG TGGAAAACAGAGCCTAAAAAGTAG
Upstream 100 bases:
>100_bases TTCTGGCATACTAAGCGGATTACAGCATCACGAGTCAGATGTAAGTGGAGGCGACATGGAAGATAAATACTTAACCCAAT CCCCGGCAGGTGAATTCATT
Downstream 100 bases:
>100_bases CTCAGGATGTCCCCAAACCCCACAAGCAAAATCATTTGGGGGTGCTTATGGGGGTTACTCATTTATCCAATACAAAATAT AAACATAAAATCAATAAGTT
Product: DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MFASGDGKVRVECRFESNTLWLSQGMICELYGKAKATISEHIKNIFADGELEENSVVRFYRTTASDGKNYQIQYFSLPLI LAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDERLKNPPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALA ADYQPSLKETTQFFQTIQNKLHFACTGYTAAELIHQRADACQPHMGLTSYKGEEVRKCDVTVAKNYLTQDEVSELNRVVN MWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGKVSKKMADEKAQAEYSQFAEQQRRLKEAEGEKDIAALLQ WKTEPKK
Sequences:
>Translated_327_residues MFASGDGKVRVECRFESNTLWLSQGMICELYGKAKATISEHIKNIFADGELEENSVVRFYRTTASDGKNYQIQYFSLPLI LAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDERLKNPPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALA ADYQPSLKETTQFFQTIQNKLHFACTGYTAAELIHQRADACQPHMGLTSYKGEEVRKCDVTVAKNYLTQDEVSELNRVVN MWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGKVSKKMADEKAQAEYSQFAEQQRRLKEAEGEKDIAALLQ WKTEPKK >Mature_327_residues MFASGDGKVRVECRFESNTLWLSQGMICELYGKAKATISEHIKNIFADGELEENSVVRFYRTTASDGKNYQIQYFSLPLI LAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDERLKNPPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALA ADYQPSLKETTQFFQTIQNKLHFACTGYTAAELIHQRADACQPHMGLTSYKGEEVRKCDVTVAKNYLTQDEVSELNRVVN MWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGKVSKKMADEKAQAEYSQFAEQQRRLKEAEGEKDIAALLQ WKTEPKK
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38025; Mature: 38025
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFASGDGKVRVECRFESNTLWLSQGMICELYGKAKATISEHIKNIFADGELEENSVVRFY CCCCCCCEEEEEEEECCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE RTTASDGKNYQIQYFSLPLILAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDERLKN EECCCCCCCEEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCC PPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALAADYQPSLKETTQFFQTIQNK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LHFACTGYTAAELIHQRADACQPHMGLTSYKGEEVRKCDVTVAKNYLTQDEVSELNRVVN HEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH MWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGKVSKKMADEKAQAEYSQFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQRRLKEAEGEKDIAALLQWKTEPKK HHHHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MFASGDGKVRVECRFESNTLWLSQGMICELYGKAKATISEHIKNIFADGELEENSVVRFY CCCCCCCEEEEEEEECCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE RTTASDGKNYQIQYFSLPLILAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDERLKN EECCCCCCCEEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCC PPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALAADYQPSLKETTQFFQTIQNK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LHFACTGYTAAELIHQRADACQPHMGLTSYKGEEVRKCDVTVAKNYLTQDEVSELNRVVN HEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH MWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGKVSKKMADEKAQAEYSQFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQRRLKEAEGEKDIAALLQWKTEPKK HHHHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA