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The map label for this gene is cdh [H]

Identifier: 29143858

GI number: 29143858

Start: 3655758

End: 3656513

Strand: Reverse

Name: cdh [H]

Synonym: t3555

Alternate gene names: 29143858

Gene position: 3656513-3655758 (Counterclockwise)

Preceding gene: 29143859

Following gene: 29143857

Centisome position: 76.31

GC content: 54.76

Gene sequence:

>756_bases
ATGAAAAAAACAGGCTACTTTTTACTGGCGGTGATAGTGATTGTCGCCGCGGCGGGCGTCGGTTACTGGAAATTTTCCGG
CAATCCTGATGCATTACGGGAAATCGTGCTTGAACGGTGCCTGCCCGATCAGTTACAGCATCAAAACCCAGCGCCTTGCG
CGGAAGTCAAACCTCGCGCCGGCTATGTCATCTTTAAAGATCGTCACGGTCCGTTGCAATATTTATTGATGCCCACCTAC
CGTATCAACGGTACAGAAAGCCCGCTATTGCTGGAACCCGCTACGCCCAACTTTTTCTGGCTGGCCTGGCAGGCTCGCGG
CTATATGAGTAAAAAATACGGGCATGATATTCCGGATAGCGCGGTCTCGCTGGCGATTAATTCGCGGCTTGGTCGTTCAC
AGGACCATTTGCATATCCATATTTCTTGCATCCGTCCTGACGTTCGGGAACAACTGGATAACGATCTCACGCGCATCAGC
ACTCGCTGGCTTCCGCTGCCGGGCGATCTGATGGGGCATGAATACCTGGCGCGCCGGGTAACCGAGAGCGAACTGGCGCA
GCGTAGTCCGTTTATGATGCTGGCGGAAGAGGTGCCGGAAGCGCGCGATCATATGGGACGCTATGCGCTGGCGGTGGTAC
GCCAAAGCGACGACTCTTTTGTTCTGCTGGCGACCGAGCGTAACCTGCTGACGCTTAATCGCGCATCGGCGGAAGAGATT
CAGGACCATAGTTGCGCCATTTTGTCTTCCCGCTGA

Upstream 100 bases:

>100_bases
ACCGTTTATAAACCCGGTAACGTATTATGTTACCGGGTTTTTTCTTTGCCACAATTTTGCGTTACTCTTCCCCGTCTATG
GGTCACAGGGAACGCATATC

Downstream 100 bases:

>100_bases
TTTTCGTTACACCCCCCTGCTCATTATCTTATTGATTCTTATCCCGGTTTAAAACTGGGGTAAGATCGTGTCTATAAAAA
TATGTGAAACCAACCAAAAG

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLERCLPDQLQHQNPAPCAEVKPRAGYVIFKDRHGPLQYLLMPTY
RINGTESPLLLEPATPNFFWLAWQARGYMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRIS
TRWLPLPGDLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATERNLLTLNRASAEEI
QDHSCAILSSR

Sequences:

>Translated_251_residues
MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLERCLPDQLQHQNPAPCAEVKPRAGYVIFKDRHGPLQYLLMPTY
RINGTESPLLLEPATPNFFWLAWQARGYMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRIS
TRWLPLPGDLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATERNLLTLNRASAEEI
QDHSCAILSSR
>Mature_251_residues
MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLERCLPDQLQHQNPAPCAEVKPRAGYVIFKDRHGPLQYLLMPTY
RINGTESPLLLEPATPNFFWLAWQARGYMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRIS
TRWLPLPGDLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATERNLLTLNRASAEEI
QDHSCAILSSR

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=250, Percent_Identity=78.4, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763
- InterPro:   IPR015993 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 28434; Mature: 28434

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLERCLPDQLQHQNPAPCAEVKPRA
CCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCC
GYVIFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLAWQARGYMSKKYGHDIPDS
CEEEEECCCCCEEEEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCHHHHCCCCCCCH
AVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRISTRWLPLPGDLMGHEYLARRV
HHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATERNLLTLNRASAEEI
HHHHHHHCCCHHHHHHHCCHHHHHHCCEEEEEEEECCCCEEEEEECCCEEEEECCCHHHH
QDHSCAILSSR
CCCCEEEECCC
>Mature Secondary Structure
MKKTGYFLLAVIVIVAAAGVGYWKFSGNPDALREIVLERCLPDQLQHQNPAPCAEVKPRA
CCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCC
GYVIFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLAWQARGYMSKKYGHDIPDS
CEEEEECCCCCEEEEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCHHHHCCCCCCCH
AVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRISTRWLPLPGDLMGHEYLARRV
HHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATERNLLTLNRASAEEI
HHHHHHHCCCHHHHHHHCCHHHHHHCCEEEEEEEECCCCEEEEEECCCEEEEECCCHHHH
QDHSCAILSSR
CCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA