| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yicJ [C]
Identifier: 29143856
GI number: 29143856
Start: 3654158
End: 3654415
Strand: Reverse
Name: yicJ [C]
Synonym: t3553
Alternate gene names: 29143856
Gene position: 3654415-3654158 (Counterclockwise)
Preceding gene: 29143857
Following gene: 29143855
Centisome position: 76.26
GC content: 52.33
Gene sequence:
>258_bases TTGGCGTTTGGCGGCATCCTCTTCTTCCAGAAGTTTGGGATGGGGATCGCGGGCGGGATACTCGGATTCCTGCTGAGCCA CTTTGGCTATCAGGCCGATGTTGAACAGAGCGCGCGTTCGCTCACCGGTATTGCGCTGATGATGACGCTCATTCCGGCTC TGTTCCACCTTGCGGTTGGGCTGCTGATGAAAAAGTATCTGATTAATAATGAATATTATCGTGATATTCAGCTCGCCCTG GCGCAGAAACAGGCATAA
Upstream 100 bases:
>100_bases TATTAATTTCTTCTGCGATATGTAAATGCCGGTGTTCTGGTCCTCTATCGCCGAAGCGGTGGATTACGGAGAAAAGAAAA CCGGTCTGCGCGTTTCCGGG
Downstream 100 bases:
>100_bases GGAGGCGCAAATGAAGGCCATGAATAAGGTTTGGGTTATCGGCGATGCCTCCGTTGATCTGGTGCCGGAAAAACAGAACA GCTATCTGAAATGCCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Na+Galactoside Symporter Family Permease; YicJ-Like Protein; SugarCation Symporter Family Protein; Zinc Finger-Domain-Containing Protein; Sugar Transporter Subfamily
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MAFGGILFFQKFGMGIAGGILGFLLSHFGYQADVEQSARSLTGIALMMTLIPALFHLAVGLLMKKYLINNEYYRDIQLAL AQKQA
Sequences:
>Translated_85_residues MAFGGILFFQKFGMGIAGGILGFLLSHFGYQADVEQSARSLTGIALMMTLIPALFHLAVGLLMKKYLINNEYYRDIQLAL AQKQA >Mature_84_residues AFGGILFFQKFGMGIAGGILGFLLSHFGYQADVEQSARSLTGIALMMTLIPALFHLAVGLLMKKYLINNEYYRDIQLALA QKQA
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9358; Mature: 9227
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFGGILFFQKFGMGIAGGILGFLLSHFGYQADVEQSARSLTGIALMMTLIPALFHLAVG CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMKKYLINNEYYRDIQLALAQKQA HHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure AFGGILFFQKFGMGIAGGILGFLLSHFGYQADVEQSARSLTGIALMMTLIPALFHLAVG CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMKKYLINNEYYRDIQLALAQKQA HHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA