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The map label for this gene is bepC [H]

Identifier: 29143013

GI number: 29143013

Start: 2729658

End: 2731067

Strand: Direct

Name: bepC [H]

Synonym: t2644

Alternate gene names: 29143013

Gene position: 2729658-2731067 (Clockwise)

Preceding gene: 29143012

Following gene: 29143014

Centisome position: 56.96

GC content: 56.95

Gene sequence:

>1410_bases
ATGGGAAGAGTCGCGCCTGTCGCCATCGTACTGGCATTTGCTTTGTTTCATCACCAGCCCCGGGGCGCAGAAGCGCTGCC
AATGATTACATCCGAAGGATTAGCAACGGACCAGATGCTTCCTTCGCTGGATGGCTCCGCCGCTGAGTTGCCGCTCAGCG
CCGCCGCGCCGGGCAACCTGACGCTCAATGACGCGGTCAATCGCGCCGTTAACTGGCATCCTTCTATTCGCGAAGCCGTC
GGCAAACTGCTCGCACAGAATGAACAAATAGAGGTCGCCAAATCGAAATATTATCCGCAAGTCAGCGCTGGCGTGAACAA
TGGGTACAGCAATACCTACACCGATCACGGGTATAGCCCCTCGCTGGTGCTGTCGGTATCGCAAATGCTTTATGACTTCG
GCAAAGTGGCAAGCCAGGTTCGCGCCGAAACCGCAGGCGCAGCACAGCAACAGGCCAACGTGTTGCTCAGTATTGATACC
GTCGCGCACGAAACCGCCAACGCCATTGTACAAACGCAGAGCTGGCAGCAAATGGTAGAAGCGGCGGAAGAACAGCTCGT
CGCGCTGGACAGCATCGGTAAACTTATCCGGCAGCGCAGCGATGAAGGCGCTACGTCGCTATCTGACGTGGTGCAAACCG
AAGCCAGAATCGAATCCGCCCGCTCGCAACTGGCGCAGTATCAGGCCAATCTCGACAGTGCGAAAGCCTCACTGATGAGC
TGGCTGGGCTGGAATTCGCTTAACGGCATCAATAATGACTTCCCGGCGAAACTCGCTCGCAGCTGTGAGACAGCGACGCC
CGAAGATCGGCTGGTGCCCGCGGTACTGGCCGCCTGGGCGCAGGCCAACGTTGCGCGGGCGAATCTGGACTATGCCAGTG
CGCAAATGACGCCGACGATTTCGCTCGAACCTTCTGTACAACATTATCTTAATGACAAATATCCCAGTCATGAAGTGCTG
GATAAAACCCAGTATTCCACCTGGGTGAAAGTTGAGATGCCGCTTTATCAGGGCGGAGGGCTGACTGCCCGACGCAACGC
CGCCAGCCATGCGGTAGACGCGGCTCAGTCGACCATTCAGCGCACCCGGCTTGATGTCCGCCAGAAACTGATGGAGGCGC
GCAGCCAGGCAATGAGTCTTGCCAGCGCGTTACAAATCCTTCGTCGGCAACAGCAGCTTAGCGAACGCACGCGCGAACTG
TATCAGCAGCAATACCTTGACCTCGGTTCCCGCCCGTTGCTCGACGTGCTTAATGCGGAGCAGGAGGTTTACCAGGCGCG
TTTTGCCGAACTGCAAACGGAAAGCCAGTTGCATCAGTTACAACTGAACTATCTGTATAACACCGGCGCGCTTCGTCAGG
CGTTCGCGTTAAATCATCGCAGCATTCAATCCGTGGAGATCCAGCCATGA

Upstream 100 bases:

>100_bases
TCTGTTGCAGAACAACCACCTGATAACCGGCGGTTGATAAAAAGCCCCGAACGCCACGACGTTCGGGGCAACAAGCGGTG
ATATTTAAAAGGGATAAACT

Downstream 100 bases:

>100_bases
CCCGCGCCGCCCCCGATGTAGAAGAGGTACTCAGTGAGCGCGCGCTAAGCCAATGGGCGCAGGCCATCAGCCATGTCGCC
GGTCATTATCGCGTTGCCTG

Product: type I secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MGRVAPVAIVLAFALFHHQPRGAEALPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAV
GKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
VAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMS
WLGWNSLNGINNDFPAKLARSCETATPEDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVL
DKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTREL
YQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNYLYNTGALRQAFALNHRSIQSVEIQP

Sequences:

>Translated_469_residues
MGRVAPVAIVLAFALFHHQPRGAEALPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAV
GKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDT
VAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMS
WLGWNSLNGINNDFPAKLARSCETATPEDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVL
DKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTREL
YQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNYLYNTGALRQAFALNHRSIQSVEIQP
>Mature_468_residues
GRVAPVAIVLAFALFHHQPRGAEALPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVG
KLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTV
AHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSW
LGWNSLNGINNDFPAKLARSCETATPEDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLD
KTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELY
QQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNYLYNTGALRQAFALNHRSIQSVEIQP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51498; Mature: 51367

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVAPVAIVLAFALFHHQPRGAEALPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHCCCCCCCHHCCCCCCCCCCCC
TLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSP
CHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCH
SLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGWNSLNGINNDFPAKLARSCETATPEDRLVPAVLAAWAQANVARANLDYASAQMTPTI
HHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEE
SLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQ
ECCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEECEECCCCCCCCCCHHHHHHHHHHHHHH
RTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QEVYQARFAELQTESQLHQLQLNYLYNTGALRQAFALNHRSIQSVEIQP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCC
>Mature Secondary Structure 
GRVAPVAIVLAFALFHHQPRGAEALPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNL
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHCCCCCCCHHCCCCCCCCCCCC
TLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSP
CHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCH
SLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGWNSLNGINNDFPAKLARSCETATPEDRLVPAVLAAWAQANVARANLDYASAQMTPTI
HHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEE
SLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQ
ECCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEECEECCCCCCCCCCHHHHHHHHHHHHHH
RTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QEVYQARFAELQTESQLHQLQLNYLYNTGALRQAFALNHRSIQSVEIQP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]